| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044766
Identifier: 66044766
GI number: 66044766
Start: 1706691
End: 1708157
Strand: Reverse
Name: 66044766
Synonym: Psyr_1519
Alternate gene names: NA
Gene position: 1708157-1706691 (Counterclockwise)
Preceding gene: 66044767
Following gene: 66044765
Centisome position: 28.03
GC content: 51.47
Gene sequence:
>1467_bases GTGCTGAAACCAATTCTGAAAGAACCCAGTGTCAACGAGAGTGAGAGGGTCCTGTCTGCCATCGTGTCAAACACGTTCTT CAGTCTCTGGTGTTATCCGAGCCTGTTCCGCTCAACAGGCAAGGGTAAAGAGTTCGCCGACCTGACGATTTATTTCAACA ACACTCTCGTCATTTTCTCGGACAAAGGCCATGTCAACTTTCAGGAGCACAATGATATCCAGTTGGCCTGGAGCCGCTGG TACCGGGCTGCAGTCAAGGAGTCTGCCAAGCAGCTGCATGGGGCTGAGAGTTTGGTCAGAAACCATCCCGACAAGCTCTT TCTCAACAGTAAGCTGGAGGATCCGTTCCCGTTCGATTTGACTAAACCAGGGTTGAAGATCCATCTGGTAGCGGTCACTG GCGGGATTGGTCAGCACGCCCAACGTTTCTTCGATTCGGTAGGACCTGGTAGTAATGGAACGCTGGTGTACCACTACGAG GTTCCTGAAGATCTTTTGTTGGAGGAGCCGTTCCTCGTAGGCGATGTCGATCCACGAAAAACATTCGTCCATGTACTTGA TGAAAGCGGTCTGAAGCTGCTTTTCGAGGAGCTGTGCACACCGGAAGATTTTATCCACTACCTGGAGACGAAGGAGCGGG TTATTCGTAATGGAACCTTCTTATCCAGCGCTGGAGAGGAGGAGACGCTCGCAACATATCTGCAGGAAGATGGTGGGTAC GGTTTCGGCGATCTGAGAGCACCGAAGGGCTATGAAGGCCACGCCTTCAGGATCCCGGAAGGGGAATGGAAGCATTATCG TCAGACAGTGGCTTACGCGCTCCGGTATGGCCATAAGAAAAAGGCGAAGCTCTGGAACGAGATCATCGCTCGATTCGCTG ATGCCATCACCGAGGCATGTGTAGGTGAGGCCAAGGATCTTCCTTTGATTGGCCATTCAAATGCTCTTCAGATTTTGGCG TCTGAGAACCTGTATTCAAGCAGCTTTCTGGCATCGGCAATGCTCGATAAGTTCGACTTGGTGCCCAAGGGCATCCGCTC TGCGCGCACGTTACCGTCCACCGCCAAGCCAGACCGATTGTATGTATTCGTGTTCTTCCCTTGGGATGATGGCTTTGCGT CATATCAGGATTACCGAGAGGCACGGACGGATTGCATGCAGCTTTACGCATACGTCGCGATGTACAAATACCAGAAAGCG AAGGAGATATTAATTTTCGGAGCTGACACAAAAGGCGGCCAAGGTGGATCTGAGACGATCTTCGCGGTTGATGCGACCGT TCCTCTTTCAAGCGAGGAACGAGAGATGGCTCAGCATACGATGAAGACCTTAAGGATCCTGGATCACGTTGTAGAAAGAG TGATCCAAACATCCAATTCTGGCGCGGATGTCGGACGTAATGAGCCGTGCCCGTGTGGATCGAAGAAAAAATACAAAAAG TGCTGCATGGGTACCGGCATGCATTGA
Upstream 100 bases:
>100_bases CAGGAGGCCATGACTTCGAGCTATGTTGCTTAGCCAAGCCGCGTGGTGTCGTTACATGCCATGCCCCTTCAAAGCGCGCC AAAGAAAAAGGACGATCTGA
Downstream 100 bases:
>100_bases GCTGTGGAGTTGTCGCGTAATTGAGGACCGCTTCCGTCCACATGCATCTCTTCCATAGATAACCTGAAGCGATCCGTTAA GGGTTTAGCAGTGCTTTGCA
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain Protein; SecC Motif-Containing Protein; Preprotein Translocase SecA Chain
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MLKPILKEPSVNESERVLSAIVSNTFFSLWCYPSLFRSTGKGKEFADLTIYFNNTLVIFSDKGHVNFQEHNDIQLAWSRW YRAAVKESAKQLHGAESLVRNHPDKLFLNSKLEDPFPFDLTKPGLKIHLVAVTGGIGQHAQRFFDSVGPGSNGTLVYHYE VPEDLLLEEPFLVGDVDPRKTFVHVLDESGLKLLFEELCTPEDFIHYLETKERVIRNGTFLSSAGEEETLATYLQEDGGY GFGDLRAPKGYEGHAFRIPEGEWKHYRQTVAYALRYGHKKKAKLWNEIIARFADAITEACVGEAKDLPLIGHSNALQILA SENLYSSSFLASAMLDKFDLVPKGIRSARTLPSTAKPDRLYVFVFFPWDDGFASYQDYREARTDCMQLYAYVAMYKYQKA KEILIFGADTKGGQGGSETIFAVDATVPLSSEEREMAQHTMKTLRILDHVVERVIQTSNSGADVGRNEPCPCGSKKKYKK CCMGTGMH
Sequences:
>Translated_488_residues MLKPILKEPSVNESERVLSAIVSNTFFSLWCYPSLFRSTGKGKEFADLTIYFNNTLVIFSDKGHVNFQEHNDIQLAWSRW YRAAVKESAKQLHGAESLVRNHPDKLFLNSKLEDPFPFDLTKPGLKIHLVAVTGGIGQHAQRFFDSVGPGSNGTLVYHYE VPEDLLLEEPFLVGDVDPRKTFVHVLDESGLKLLFEELCTPEDFIHYLETKERVIRNGTFLSSAGEEETLATYLQEDGGY GFGDLRAPKGYEGHAFRIPEGEWKHYRQTVAYALRYGHKKKAKLWNEIIARFADAITEACVGEAKDLPLIGHSNALQILA SENLYSSSFLASAMLDKFDLVPKGIRSARTLPSTAKPDRLYVFVFFPWDDGFASYQDYREARTDCMQLYAYVAMYKYQKA KEILIFGADTKGGQGGSETIFAVDATVPLSSEEREMAQHTMKTLRILDHVVERVIQTSNSGADVGRNEPCPCGSKKKYKK CCMGTGMH >Mature_488_residues MLKPILKEPSVNESERVLSAIVSNTFFSLWCYPSLFRSTGKGKEFADLTIYFNNTLVIFSDKGHVNFQEHNDIQLAWSRW YRAAVKESAKQLHGAESLVRNHPDKLFLNSKLEDPFPFDLTKPGLKIHLVAVTGGIGQHAQRFFDSVGPGSNGTLVYHYE VPEDLLLEEPFLVGDVDPRKTFVHVLDESGLKLLFEELCTPEDFIHYLETKERVIRNGTFLSSAGEEETLATYLQEDGGY GFGDLRAPKGYEGHAFRIPEGEWKHYRQTVAYALRYGHKKKAKLWNEIIARFADAITEACVGEAKDLPLIGHSNALQILA SENLYSSSFLASAMLDKFDLVPKGIRSARTLPSTAKPDRLYVFVFFPWDDGFASYQDYREARTDCMQLYAYVAMYKYQKA KEILIFGADTKGGQGGSETIFAVDATVPLSSEEREMAQHTMKTLRILDHVVERVIQTSNSGADVGRNEPCPCGSKKKYKK CCMGTGMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54967; Mature: 54967
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPILKEPSVNESERVLSAIVSNTFFSLWCYPSLFRSTGKGKEFADLTIYFNNTLVIFS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEEEECCEEEEEE DKGHVNFQEHNDIQLAWSRWYRAAVKESAKQLHGAESLVRNHPDKLFLNSKLEDPFPFDL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC TKPGLKIHLVAVTGGIGQHAQRFFDSVGPGSNGTLVYHYEVPEDLLLEEPFLVGDVDPRK CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCEECCCCHHH TFVHVLDESGLKLLFEELCTPEDFIHYLETKERVIRNGTFLSSAGEEETLATYLQEDGGY HHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCC GFGDLRAPKGYEGHAFRIPEGEWKHYRQTVAYALRYGHKKKAKLWNEIIARFADAITEAC CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VGEAKDLPLIGHSNALQILASENLYSSSFLASAMLDKFDLVPKGIRSARTLPSTAKPDRL HCCCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEE YVFVFFPWDDGFASYQDYREARTDCMQLYAYVAMYKYQKAKEILIFGADTKGGQGGSETI EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEE FAVDATVPLSSEEREMAQHTMKTLRILDHVVERVIQTSNSGADVGRNEPCPCGSKKKYKK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH CCMGTGMH HHHCCCCC >Mature Secondary Structure MLKPILKEPSVNESERVLSAIVSNTFFSLWCYPSLFRSTGKGKEFADLTIYFNNTLVIFS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCEEEEEEEECCEEEEEE DKGHVNFQEHNDIQLAWSRWYRAAVKESAKQLHGAESLVRNHPDKLFLNSKLEDPFPFDL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC TKPGLKIHLVAVTGGIGQHAQRFFDSVGPGSNGTLVYHYEVPEDLLLEEPFLVGDVDPRK CCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCEECCCCHHH TFVHVLDESGLKLLFEELCTPEDFIHYLETKERVIRNGTFLSSAGEEETLATYLQEDGGY HHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHCCCC GFGDLRAPKGYEGHAFRIPEGEWKHYRQTVAYALRYGHKKKAKLWNEIIARFADAITEAC CCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VGEAKDLPLIGHSNALQILASENLYSSSFLASAMLDKFDLVPKGIRSARTLPSTAKPDRL HCCCCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCEE YVFVFFPWDDGFASYQDYREARTDCMQLYAYVAMYKYQKAKEILIFGADTKGGQGGSETI EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEE FAVDATVPLSSEEREMAQHTMKTLRILDHVVERVIQTSNSGADVGRNEPCPCGSKKKYKK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH CCMGTGMH HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA