| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yaiN [C]
Identifier: 66044752
GI number: 66044752
Start: 1692009
End: 1692284
Strand: Direct
Name: yaiN [C]
Synonym: Psyr_1505
Alternate gene names: 66044752
Gene position: 1692009-1692284 (Clockwise)
Preceding gene: 66044745
Following gene: 66044753
Centisome position: 27.77
GC content: 55.43
Gene sequence:
>276_bases ATGACTCACGTAGCATCAAACAAAGACGATCTGCTTAAACGCGTAAAGCGCATTGCAGGCCAGATCCAGGCTGTAGAACG GGCTCTTGAGTCAGATCACGACTGTGCCAAGACGCTCCACCTTGTGGCCGCCACGCGCGGGGCTATCAATGGCCTGATGG ACGAAATCATCGAAGATCACGCCCGGGAGCATGTGGCTAATCCGGCGCTGAGCGATGAAGAGCGGTCCAAGGGCGTCGAA GAGCTTCTCGAAGCCATTCGACGTTATTCCAAGTGA
Upstream 100 bases:
>100_bases ATAAGCCTGCTGCGTACGACACGCAATTAGGATTTATTCAGCCCGAATTGCATAGGGGGGAAGGGTATGAAATCATAGGT ATAGGTAAGGGGGGTATACT
Downstream 100 bases:
>100_bases TGAACGCAGGCTCGAACTTCATGAACAGCAACACCAGCTTTACGCACGAGCACGTATATCTCGGCTCGGCACATGATGAG AATGCAAAACGTACCCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTHVASNKDDLLKRVKRIAGQIQAVERALESDHDCAKTLHLVAATRGAINGLMDEIIEDHAREHVANPALSDEERSKGVE ELLEAIRRYSK
Sequences:
>Translated_91_residues MTHVASNKDDLLKRVKRIAGQIQAVERALESDHDCAKTLHLVAATRGAINGLMDEIIEDHAREHVANPALSDEERSKGVE ELLEAIRRYSK >Mature_90_residues THVASNKDDLLKRVKRIAGQIQAVERALESDHDCAKTLHLVAATRGAINGLMDEIIEDHAREHVANPALSDEERSKGVEE LLEAIRRYSK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=91, Percent_Identity=42.8571428571429, Blast_Score=74, Evalue=2e-15, Organism=Escherichia coli, GI1788422, Length=92, Percent_Identity=36.9565217391304, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 10156; Mature: 10024
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHVASNKDDLLKRVKRIAGQIQAVERALESDHDCAKTLHLVAATRGAINGLMDEIIEDH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREHVANPALSDEERSKGVEELLEAIRRYSK HHHHHCCCCCCHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure THVASNKDDLLKRVKRIAGQIQAVERALESDHDCAKTLHLVAATRGAINGLMDEIIEDH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREHVANPALSDEERSKGVEELLEAIRRYSK HHHHHCCCCCCHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA