| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is arsB [H]
Identifier: 66044750
GI number: 66044750
Start: 1690145
End: 1691434
Strand: Reverse
Name: arsB [H]
Synonym: Psyr_1503
Alternate gene names: 66044750
Gene position: 1691434-1690145 (Counterclockwise)
Preceding gene: 66044751
Following gene: 66044749
Centisome position: 27.76
GC content: 57.05
Gene sequence:
>1290_bases ATGCTTACTGCGGCTGCAATTTTTGTATTCACATTGGTACTGGTGATCTGGCAGCCCAAGGGCTTGGGCGTCGGATGGAG CGCAGCGGCAGGAGCCATTCTTGCTCTGCTAACTGGCGTTGTCAGCCTGAGTGACGTACCTACCGTATGGCACATTGTAT GGAACGCCACCGCTACCTTTATTGCCGTCATTATCATTAGCCTGTTGCTCGATGAAGCCGGCTTTTTCGAATGGGCTGCG CTTCATGTGGCGCGCTGGGGAAAGGGAAGTGGAGGACGATTATTTGCGCTGATGATCCTCTTAGGTGCTGCCGTTTCGGC TCTATTTGCCAATGACGGCGCAGCGTTGATCCTAACGCCTATCGTAATTGCCATGCTGAACGCTTTGCGCTTTAGCCCTG CCTCTACTTTAGCGTTCGTCATGGCTGCAGGTTTCATCGCAGACACTGCGAGCTTGCCCCTGGTGGTCTCCAACCTGGTC AACATCGTCTCTGCTGACTTCTTCAACGTAGGCTTCGGGGAGTACGCCTCGATCATGTGGCCGGTGAACCTGATCAGCGT GGCAGCCACGTTGTTGATGCTTTGGCTGTTCTACAAAAAAGACATTCCCGCACGGTACGTGCCTGAGCAGCTGGACGTGC CCAGGCGCGCCATTCGCGACCGTGCGACCTTTATTGCGGGCTGGTGGGTACTGGTGCTACTGCTTGTGGGCTTGTTCGCC TTAGAGCCGCTGGGTATCCCCATCAGCGCTGTGGCAGCGGCGTGCGCGCTTATCCTCCTGATCGTCGCTGGCAGGGGCCG CGTCATCTCGACCCGAAACGTGATCAAGCATGCCCCGTGGCAGGTCGTGGTCTTCTCCTTGGGAATGTACCTGGTCGTGT ATGGGTTGCGTAACGCCGGCCTGACAGATGCCTTTACCGCGTTACTCAATGCGCTGGCTGAGCAAGGCCTGTGGGCAGCT ACCCTGGGTACTGGCCTAGCCGCCGCCCTGCTGTCCTCGGTCATGAACAACATGCCTAGTGTTTTGATCGGAGCCCTTTC TATTCAGGCTAGCAATGCCTCGGGCATCGTGCACCAGGGCATGGTGTACGCCAATGTCATCGGCTGTAATCTGGGCCCAA AAATCACCCCTATTGGTAGCCTGGCTACCCTGCTGTGGCTGCATGTCCTTGCGCAGAAAGACATCCGCATTACCTGGGGT TATTACTTCAAGGTCGGCAGCCTCCTGACCCTTCCCATCCTGCTCGTCACCTTGGCCGCATTGGCCCTGCGGCTGAGTCT TCACGCTTAG
Upstream 100 bases:
>100_bases TCATGCCTGGGTTGATCAAGACTCCAATCGGCTCGAATCCATGCAGGACCGTCCTGTTCGCCAAGCTGCTTGCTGCTGAC CTTCTGACGAGAGTTTCGTG
Downstream 100 bases:
>100_bases GATCAATAATGAAAGTTCTATTTATGTGTACCGCCAATAGCTGCCGGAGCGTGCTCTCTGAAGGCTTGTTCAACCACCTT GCGCCTGACGGAATGGTGGG
Product: arsenical pump membrane protein
Products: ADP; phosphate; arsenite [Periplasm] [C]
Alternate protein names: Arsenic efflux pump protein [H]
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLTAAAIFVFTLVLVIWQPKGLGVGWSAAAGAILALLTGVVSLSDVPTVWHIVWNATATFIAVIIISLLLDEAGFFEWAA LHVARWGKGSGGRLFALMILLGAAVSALFANDGAALILTPIVIAMLNALRFSPASTLAFVMAAGFIADTASLPLVVSNLV NIVSADFFNVGFGEYASIMWPVNLISVAATLLMLWLFYKKDIPARYVPEQLDVPRRAIRDRATFIAGWWVLVLLLVGLFA LEPLGIPISAVAAACALILLIVAGRGRVISTRNVIKHAPWQVVVFSLGMYLVVYGLRNAGLTDAFTALLNALAEQGLWAA TLGTGLAAALLSSVMNNMPSVLIGALSIQASNASGIVHQGMVYANVIGCNLGPKITPIGSLATLLWLHVLAQKDIRITWG YYFKVGSLLTLPILLVTLAALALRLSLHA
Sequences:
>Translated_429_residues MLTAAAIFVFTLVLVIWQPKGLGVGWSAAAGAILALLTGVVSLSDVPTVWHIVWNATATFIAVIIISLLLDEAGFFEWAA LHVARWGKGSGGRLFALMILLGAAVSALFANDGAALILTPIVIAMLNALRFSPASTLAFVMAAGFIADTASLPLVVSNLV NIVSADFFNVGFGEYASIMWPVNLISVAATLLMLWLFYKKDIPARYVPEQLDVPRRAIRDRATFIAGWWVLVLLLVGLFA LEPLGIPISAVAAACALILLIVAGRGRVISTRNVIKHAPWQVVVFSLGMYLVVYGLRNAGLTDAFTALLNALAEQGLWAA TLGTGLAAALLSSVMNNMPSVLIGALSIQASNASGIVHQGMVYANVIGCNLGPKITPIGSLATLLWLHVLAQKDIRITWG YYFKVGSLLTLPILLVTLAALALRLSLHA >Mature_429_residues MLTAAAIFVFTLVLVIWQPKGLGVGWSAAAGAILALLTGVVSLSDVPTVWHIVWNATATFIAVIIISLLLDEAGFFEWAA LHVARWGKGSGGRLFALMILLGAAVSALFANDGAALILTPIVIAMLNALRFSPASTLAFVMAAGFIADTASLPLVVSNLV NIVSADFFNVGFGEYASIMWPVNLISVAATLLMLWLFYKKDIPARYVPEQLDVPRRAIRDRATFIAGWWVLVLLLVGLFA LEPLGIPISAVAAACALILLIVAGRGRVISTRNVIKHAPWQVVVFSLGMYLVVYGLRNAGLTDAFTALLNALAEQGLWAA TLGTGLAAALLSSVMNNMPSVLIGALSIQASNASGIVHQGMVYANVIGCNLGPKITPIGSLATLLWLHVLAQKDIRITWG YYFKVGSLLTLPILLVTLAALALRLSLHA
Specific function: Involved in arsenical resistance. Thought to form the channel of an arsenite pump [H]
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsB family [H]
Homologues:
Organism=Escherichia coli, GI87082277, Length=427, Percent_Identity=71.4285714285714, Blast_Score=582, Evalue=1e-167,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 [H]
Pfam domain/function: PF02040 ArsB [H]
EC number: NA
Molecular weight: Translated: 45444; Mature: 45444
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTAAAIFVFTLVLVIWQPKGLGVGWSAAAGAILALLTGVVSLSDVPTVWHIVWNATATF CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IAVIIISLLLDEAGFFEWAALHVARWGKGSGGRLFALMILLGAAVSALFANDGAALILTP HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVIAMLNALRFSPASTLAFVMAAGFIADTASLPLVVSNLVNIVSADFFNVGFGEYASIMW HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PVNLISVAATLLMLWLFYKKDIPARYVPEQLDVPRRAIRDRATFIAGWWVLVLLLVGLFA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEPLGIPISAVAAACALILLIVAGRGRVISTRNVIKHAPWQVVVFSLGMYLVVYGLRNAG HCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC LTDAFTALLNALAEQGLWAATLGTGLAAALLSSVMNNMPSVLIGALSIQASNASGIVHQG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCHHHHC MVYANVIGCNLGPKITPIGSLATLLWLHVLAQKDIRITWGYYFKVGSLLTLPILLVTLAA HHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHH LALRLSLHA HHHHHHCCC >Mature Secondary Structure MLTAAAIFVFTLVLVIWQPKGLGVGWSAAAGAILALLTGVVSLSDVPTVWHIVWNATATF CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IAVIIISLLLDEAGFFEWAALHVARWGKGSGGRLFALMILLGAAVSALFANDGAALILTP HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH IVIAMLNALRFSPASTLAFVMAAGFIADTASLPLVVSNLVNIVSADFFNVGFGEYASIMW HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PVNLISVAATLLMLWLFYKKDIPARYVPEQLDVPRRAIRDRATFIAGWWVLVLLLVGLFA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEPLGIPISAVAAACALILLIVAGRGRVISTRNVIKHAPWQVVVFSLGMYLVVYGLRNAG HCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC LTDAFTALLNALAEQGLWAATLGTGLAAALLSSVMNNMPSVLIGALSIQASNASGIVHQG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCCHHHHC MVYANVIGCNLGPKITPIGSLATLLWLHVLAQKDIRITWGYYFKVGSLLTLPILLVTLAA HHHHHEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHH LALRLSLHA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; arsenite [Cytoplasm]; H2O [C]
Specific reaction: ATP + arsenite [Cytoplasm] + H2O = ADP + phosphate + arsenite [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9006011 [H]