| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is arsR [H]
Identifier: 66044751
GI number: 66044751
Start: 1691456
End: 1691857
Strand: Reverse
Name: arsR [H]
Synonym: Psyr_1504
Alternate gene names: 66044751
Gene position: 1691857-1691456 (Counterclockwise)
Preceding gene: 66044756
Following gene: 66044750
Centisome position: 27.76
GC content: 53.48
Gene sequence:
>402_bases ATGAGTTACATCTGTATATTCGGATATACGAATATTAAAATTGAACGTCCCATGCACCTTTCCCCGGTAACCCTTTTCAA ATGTTTAGGCGACGAGACACGAACCCGCATCATGCTCATGCTGGCTGCGCAGGGTGAGCTATGCGTGTGCGAACTTATCT GGGCACTTGACGACAACCAACCCAAGGTTTCTCGTCACCTGGCCCAGTTGCGTACCTGCGGGCTGCTGGAGGATCGCCGG CAAGGACAATGGATCTACTACCGCCTTCACCCCCAATTGCCGGTCTGGGTCCTAGACGTGCTCCAGGTAACCCTCAAAGC CAATCATGCCTGGGTTGATCAAGACTCCAATCGGCTCGAATCCATGCAGGACCGTCCTGTTCGCCAAGCTGCTTGCTGCT GA
Upstream 100 bases:
>100_bases AATTCGGGCTGAATAAATCCTAATTGCGTGTCGTACGCAGCAGGCTTATGACACAACTGATTGGTCCATACGTATCAAGC GTACTCAGACCTTTCGCAGA
Downstream 100 bases:
>100_bases CCTTCTGACGAGAGTTTCGTGATGCTTACTGCGGCTGCAATTTTTGTATTCACATTGGTACTGGTGATCTGGCAGCCCAA GGGCTTGGGCGTCGGATGGA
Product: regulatory protein, ArsR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSYICIFGYTNIKIERPMHLSPVTLFKCLGDETRTRIMLMLAAQGELCVCELIWALDDNQPKVSRHLAQLRTCGLLEDRR QGQWIYYRLHPQLPVWVLDVLQVTLKANHAWVDQDSNRLESMQDRPVRQAACC
Sequences:
>Translated_133_residues MSYICIFGYTNIKIERPMHLSPVTLFKCLGDETRTRIMLMLAAQGELCVCELIWALDDNQPKVSRHLAQLRTCGLLEDRR QGQWIYYRLHPQLPVWVLDVLQVTLKANHAWVDQDSNRLESMQDRPVRQAACC >Mature_132_residues SYICIFGYTNIKIERPMHLSPVTLFKCLGDETRTRIMLMLAAQGELCVCELIWALDDNQPKVSRHLAQLRTCGLLEDRRQ GQWIYYRLHPQLPVWVLDVLQVTLKANHAWVDQDSNRLESMQDRPVRQAACC
Specific function: Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenat
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789916, Length=82, Percent_Identity=57.3170731707317, Blast_Score=103, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR018334 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 15500; Mature: 15369
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYICIFGYTNIKIERPMHLSPVTLFKCLGDETRTRIMLMLAAQGELCVCELIWALDDNQ CCEEEEEECCEEEEECCCCCCHHHHHHHCCCCCHHEEEEEEECCCCEEEEEEEECCCCCC PKVSRHLAQLRTCGLLEDRRQGQWIYYRLHPQLPVWVLDVLQVTLKANHAWVDQDSNRLE CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCHHHH SMQDRPVRQAACC HHHCCCCHHHCCC >Mature Secondary Structure SYICIFGYTNIKIERPMHLSPVTLFKCLGDETRTRIMLMLAAQGELCVCELIWALDDNQ CEEEEEECCEEEEECCCCCCHHHHHHHCCCCCHHEEEEEEECCCCEEEEEEEECCCCCC PKVSRHLAQLRTCGLLEDRRQGQWIYYRLHPQLPVWVLDVLQVTLKANHAWVDQDSNRLE CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEECCCCCHHHH SMQDRPVRQAACC HHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2408017; 1838573; 8416957 [H]