| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044726
Identifier: 66044726
GI number: 66044726
Start: 1668346
End: 1669515
Strand: Direct
Name: 66044726
Synonym: Psyr_1479
Alternate gene names: NA
Gene position: 1668346-1669515 (Clockwise)
Preceding gene: 66044722
Following gene: 66044737
Centisome position: 27.38
GC content: 56.67
Gene sequence:
>1170_bases ATGAGTGAGACACGACTCGCAGCTATAATGGGCGGCAGCCATCCACTGGCGGCTTTGTCCAATCCACGAGAAGCGATCCG GCAGTTCACACCCAACTGGTTCGCCGCCACGATGGGCACCGGGATTCTGGCGCTGGCTCTGGGCCAACTGCCCTTTGTTG CGCAGTGGCCCAAAGCGTTAGGGGAAGCCTTGTGGTTTTTTAATATCGTGCTGTTTTGCCTGTTTACGCTGATGTACGCG AGCCGTTGGGTATTGTTCTTCGATGAGGCCAAACAGATCTTCGGCCACTCCACTGTATCGATGTTTTTTGGAACTATCCC CATGGGATTGGCGACCATCATCAACGGTTTTCTCCTTTATGGTTTGCCACGCTGGGGGGGTGGGGTAGTCGCTTTAGCCG AAGTGTTGTGGTGGATCGATGTCACCATGGCATTGGCCTGCGGGGTGCTGATCCCGTATATGATGTTTACTCGCCAGCAG CACAGCATTGATCAGATGACAGCGGTATGGCTGCTGCCAGTAGTTGCGGCTGAGGTGGCTGCCGCCAGTGGCGGTCTATT GGCTCCGCACCTCGCTGATGCGAGCGCACAGTTCACCATGCTCATCACCAGCTACGTGCTGTGGGCCTACTCGGTGCCCG TCGCCTTGAGCATACTGGTGATCCTGTTACTGCGCATGGCTCTGCACAAACTACCTCATGAAAGCATGGCAGCATCGAGC TGGCTGTCTTTAGGGCCGATCGGTACCGGGGCTTTGGGGATGTTGCTGCTGGGCAACGATGCTCCAGCAATCTTTGCTGC CCATGGAATGGCAAGCATCGGCGGCGTAGCCGAGGGCATTGGCTTGATCGGTGGTGTGCTGTTCTGGGGGCTGGGATTGT GGTGGATGGTATTGGCGCTGCTAATTACCGGGCGCTACTTCAGGGAGGGCATTCCCTTCAACCTCGGCTGGTGGGGCTTC ACCTTTCCGCTGGGAGTGTACGCCGTAACAACCCTCAAATTGGGCTCTATGCTGCACCTCACGTTCTTTAGCTTCTTTGG CGTGGTGCTGGTGTTGATGCTGACTGTCATGTGGATGATCGTCGCGGCTAAAACCCTGGCTGGTGCCTATCGCGGCAACT TGTTCGTCTCGCCGTGTATCCACTCGCTGAGCAAGGCGAGCAAAACCTGA
Upstream 100 bases:
>100_bases TAGGTCATATAAACCTATACTATCCGTTTTTACCGCTATTCCCATCAAGCTATACTTCAACCATGTCATATCGAAGGCAC ACTGAAGCGGGAGCGCGAAA
Downstream 100 bases:
>100_bases GCCTTTGGCTACTTGATCGACTGTTTGGCGTGACGCAGTGTGGACAAAATGCGCTGCCTAACATTCGGGTGAGTGCAAAC GGAAAGGGGGCTTGGGTGTG
Product: C4-dicarboxylate transporter/malic acid transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKALGEALWFFNIVLFCLFTLMYA SRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLYGLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQ HSIDQMTAVWLLPVVAAEVAAASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLALLITGRYFREGIPFNLGWWGF TFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMIVAAKTLAGAYRGNLFVSPCIHSLSKASKT
Sequences:
>Translated_389_residues MSETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKALGEALWFFNIVLFCLFTLMYA SRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLYGLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQ HSIDQMTAVWLLPVVAAEVAAASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLALLITGRYFREGIPFNLGWWGF TFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMIVAAKTLAGAYRGNLFVSPCIHSLSKASKT >Mature_388_residues SETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKALGEALWFFNIVLFCLFTLMYAS RWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLYGLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQH SIDQMTAVWLLPVVAAEVAAASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASSW LSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLALLITGRYFREGIPFNLGWWGFT FPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMIVAAKTLAGAYRGNLFVSPCIHSLSKASKT
Specific function: Unknown
COG id: COG1275
COG function: function code P; Tellurite resistance protein and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tellurite-resistance/dicarboxylate transporter (TDT) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325165, Length=367, Percent_Identity=22.0708446866485, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004695 - InterPro: IPR011552 [H]
Pfam domain/function: PF03595 C4dic_mal_tran [H]
EC number: NA
Molecular weight: Translated: 42058; Mature: 41927
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKAL CCCCCEEHHHCCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH GEALWFFNIVLFCLFTLMYASRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLY HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQHSIDQMTAVWLLPVVAAEVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS HCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLAL HHHCCCCCCCHHHHEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LITGRYFREGIPFNLGWWGFTFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAKTLAGAYRGNLFVSPCIHSLSKASKT HHHHHHHHHHCCCEEHHHHHHHHHHCCCC >Mature Secondary Structure SETRLAAIMGGSHPLAALSNPREAIRQFTPNWFAATMGTGILALALGQLPFVAQWPKAL CCCCEEHHHCCCCCHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH GEALWFFNIVLFCLFTLMYASRWVLFFDEAKQIFGHSTVSMFFGTIPMGLATIINGFLLY HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GLPRWGGGVVALAEVLWWIDVTMALACGVLIPYMMFTRQQHSIDQMTAVWLLPVVAAEVA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASGGLLAPHLADASAQFTMLITSYVLWAYSVPVALSILVILLLRMALHKLPHESMAASS HCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH WLSLGPIGTGALGMLLLGNDAPAIFAAHGMASIGGVAEGIGLIGGVLFWGLGLWWMVLAL HHHCCCCCCCHHHHEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LITGRYFREGIPFNLGWWGFTFPLGVYAVTTLKLGSMLHLTFFSFFGVVLVLMLTVMWMI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAKTLAGAYRGNLFVSPCIHSLSKASKT HHHHHHHHHHCCCEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]