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The map label for this gene is yebC [C]

Identifier: 66044655

GI number: 66044655

Start: 1594073

End: 1594819

Strand: Direct

Name: yebC [C]

Synonym: Psyr_1407

Alternate gene names: 66044655

Gene position: 1594073-1594819 (Clockwise)

Preceding gene: 66044654

Following gene: 66044656

Centisome position: 26.16

GC content: 58.63

Gene sequence:

>747_bases
ATGGCAGGTCATTCTAAGTGGGCGAACATCAAGCACCGCAAAGAGCGTCAGGATGCCAAAAAAGGCAAGATTTTCACCAA
GTGGATCCGTGAGCTGACCGTTGCTGCGCGTCAGGGCGGTGGTGATCCCGGTTCCAACCCGCGTCTGCGTCTGGCGCTGG
ACAAGGCGCTTGGTGCGAACATGACCCGTGACACCATTGATCGTGCGGTGGCGCGAGGGGTAGGGGCCTCCGACGGTGAT
GATGTCGAGGAGCTGGGTTACGAGGGCTACGGTCCGGGCGGCGTGGCGATCATGGTCGAAACCATGACCGACAACCGCAA
CCGTACCGCGGCGGCTGTGCGCCATGCATTCACCAAATGCGGCGGCAATCTCGGCACCGACGGCTCTGTTGCCTACCTGT
TCGATCGCAAGGGGCAGATCTCCTTCGCTGCCGGGGTCGATGAGGATTCGCTGATCGAGGCTGCCATGGAGGCTGATGCT
GACGATGTCGTGACCAACGAAGACGGCTCGATCGATGTGTTCACATCGTTCTCCGGGTTTTATGCGGTGCGTAACGCATT
GGAGGCTGCGGGTTTCAAGGCTGCAGACGCAGAGATTGTCATGCTGCCGACCACCAGTGCCGTGCTTGATCTGGAAACCG
CTGAAAAGGTACTCAAGCTGATTGATATGCTCGAAGACCTGGATGACGTGCAGAACGTGTATTCAAATGCGGAGATCCCG
GACGAAGTGATGGAGCAACTGGGCTGA

Upstream 100 bases:

>100_bases
CAATGATGCGCCCTGCATTTACCCCTTATTGAGTGAAGCTTTTTGCCCGTCTGTTCAGGGCGAAAGGTGAAGGTGTTTCA
AAAAGAATCTGGAGCGAAAA

Downstream 100 bases:

>100_bases
TCGCTTGCAGGTAACACCAGGTCGGAAGCCGGGGGAACGAAGCTGTGAGCAACGCGCAGCTATCGGCCCCCGGCTTCTGC
CTTTATGCTGCACCTATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MAGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMTRDTIDRAVARGVGASDGD
DVEELGYEGYGPGGVAIMVETMTDNRNRTAAAVRHAFTKCGGNLGTDGSVAYLFDRKGQISFAAGVDEDSLIEAAMEADA
DDVVTNEDGSIDVFTSFSGFYAVRNALEAAGFKAADAEIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVYSNAEIP
DEVMEQLG

Sequences:

>Translated_248_residues
MAGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMTRDTIDRAVARGVGASDGD
DVEELGYEGYGPGGVAIMVETMTDNRNRTAAAVRHAFTKCGGNLGTDGSVAYLFDRKGQISFAAGVDEDSLIEAAMEADA
DDVVTNEDGSIDVFTSFSGFYAVRNALEAAGFKAADAEIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVYSNAEIP
DEVMEQLG
>Mature_247_residues
AGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMTRDTIDRAVARGVGASDGDD
VEELGYEGYGPGGVAIMVETMTDNRNRTAAAVRHAFTKCGGNLGTDGSVAYLFDRKGQISFAAGVDEDSLIEAAMEADAD
DVVTNEDGSIDVFTSFSGFYAVRNALEAAGFKAADAEIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVYSNAEIPD
EVMEQLG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=27.9352226720648, Blast_Score=111, Evalue=7e-25,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=66.3967611336032, Blast_Score=335, Evalue=1e-93,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=40.343347639485, Blast_Score=153, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=251, Percent_Identity=27.8884462151394, Blast_Score=77, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=268, Percent_Identity=32.8358208955224, Blast_Score=122, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=27.710843373494, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1407_PSEU2 (Q4ZWL4)

Other databases:

- EMBL:   CP000075
- RefSeq:   YP_234496.1
- HSSP:   P0A8A0
- ProteinModelPortal:   Q4ZWL4
- SMR:   Q4ZWL4
- STRING:   Q4ZWL4
- GeneID:   3366904
- GenomeReviews:   CP000075_GR
- KEGG:   psb:Psyr_1407
- NMPDR:   fig|205918.4.peg.1892
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   PSYR205918:PSYR_1407-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26580; Mature: 26449

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGAN
CCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCC
MTRDTIDRAVARGVGASDGDDVEELGYEGYGPGGVAIMVETMTDNRNRTAAAVRHAFTKC
CCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
GGNLGTDGSVAYLFDRKGQISFAAGVDEDSLIEAAMEADADDVVTNEDGSIDVFTSFSGF
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCEECCCCCEEEEECCHHH
YAVRNALEAAGFKAADAEIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVYSNAEIP
HHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEVMEQLG
HHHHHHCC
>Mature Secondary Structure 
AGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGAN
CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCC
MTRDTIDRAVARGVGASDGDDVEELGYEGYGPGGVAIMVETMTDNRNRTAAAVRHAFTKC
CCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
GGNLGTDGSVAYLFDRKGQISFAAGVDEDSLIEAAMEADADDVVTNEDGSIDVFTSFSGF
CCCCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCEECCCCCEEEEECCHHH
YAVRNALEAAGFKAADAEIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVYSNAEIP
HHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEVMEQLG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA