Click here to switch to the map view.

The map label for this gene is 66044587

Identifier: 66044587

GI number: 66044587

Start: 1517134

End: 1517967

Strand: Reverse

Name: 66044587

Synonym: Psyr_1339

Alternate gene names: NA

Gene position: 1517967-1517134 (Counterclockwise)

Preceding gene: 66044588

Following gene: 66044586

Centisome position: 24.91

GC content: 57.19

Gene sequence:

>834_bases
ATGACCGCACCCGCTGTTACCCAAGGCGTAAAACTGCCCGCATCCTGCTGCATGCGCAGCGCTGGAAATCACCAGGCTTC
GTATGATGCAGCGATTCGCGAAAACCCCGCCAACGCGCCGATCACCCCTGCTTACCCATCGGAAACCGGCGCCGACACCA
GCCAGTCAGGTCGCCAGGCGCGCCTGCTGGTTTCGTTCAGCAAATACTGGGCTCGCGGGCGAACCCTGAAAGTTCTTTTT
TTGAAGAATCCTCCTGCCAGCCTGACAGCACCCATCGTCGAGGCCGCCCGCAAGTGGCTGCCGCACATAAACCTGAAATT
CGAGTTCGTGACGGACGGGGCGAGTGATATCCGAATTGGCTTCAATGAACACCTGAACTGGAGCGCCATAGGCACCGATA
CCCTGCTGGCCGGACCTGATGAGGCTACGATGGAGTTCAACCTAAAAGAGCTGTACACGGCGGACCTGAAGCCGATGCCG
GAATTGACGCGCATCGTACTGCATGAATTCGGGCACGCCTTGGGCGCGGTTCACGAGCATCAGCATCCACAGGCAAACAT
CCCCTGGAACGAGCCGCTCTTGCGCTCACTGCTTTCGCAAACCGGGTTGAGTGACGAAGAGATCAATACCAATTTTTTCG
ACAGGTACGAGGCCGCAGACTTCCACTACTCGGCTTACGACCGTGATTCGGTCATGCATTTCGATATCCCCAACGGCCTG
ACCCTCGGCGACTTCGAGATCATCAATGTGGGCAAGACACTCAGCAGCAATGACATCGCCGTGATGGGCGCTATCTACGC
GGACCGTGGCAACTCGAAATTTGAAACGCTCTGA

Upstream 100 bases:

>100_bases
GGTAATTAGTTACCACCTCCAGCCCCCTGCGTGAACGTACCCTCACCCTTCATTTTTAATGCTTCCAGACACGAAGCGAA
CTACCATGAAGGCCACTCCC

Downstream 100 bases:

>100_bases
CGGAGAGCGTCCTGACACGTGTTGATCATGCGGCAATCAACAGCGCGCCATACGTCCCCAACGAGTGGCGTGACCGCCCG
AAAAAGTGCTGACTACTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase Metallopeptidase; Peptidase Domain-Containing Protein; Peptidase Domain Protein; Matrixin Family

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTAPAVTQGVKLPASCCMRSAGNHQASYDAAIRENPANAPITPAYPSETGADTSQSGRQARLLVSFSKYWARGRTLKVLF
LKNPPASLTAPIVEAARKWLPHINLKFEFVTDGASDIRIGFNEHLNWSAIGTDTLLAGPDEATMEFNLKELYTADLKPMP
ELTRIVLHEFGHALGAVHEHQHPQANIPWNEPLLRSLLSQTGLSDEEINTNFFDRYEAADFHYSAYDRDSVMHFDIPNGL
TLGDFEIINVGKTLSSNDIAVMGAIYADRGNSKFETL

Sequences:

>Translated_277_residues
MTAPAVTQGVKLPASCCMRSAGNHQASYDAAIRENPANAPITPAYPSETGADTSQSGRQARLLVSFSKYWARGRTLKVLF
LKNPPASLTAPIVEAARKWLPHINLKFEFVTDGASDIRIGFNEHLNWSAIGTDTLLAGPDEATMEFNLKELYTADLKPMP
ELTRIVLHEFGHALGAVHEHQHPQANIPWNEPLLRSLLSQTGLSDEEINTNFFDRYEAADFHYSAYDRDSVMHFDIPNGL
TLGDFEIINVGKTLSSNDIAVMGAIYADRGNSKFETL
>Mature_276_residues
TAPAVTQGVKLPASCCMRSAGNHQASYDAAIRENPANAPITPAYPSETGADTSQSGRQARLLVSFSKYWARGRTLKVLFL
KNPPASLTAPIVEAARKWLPHINLKFEFVTDGASDIRIGFNEHLNWSAIGTDTLLAGPDEATMEFNLKELYTADLKPMPE
LTRIVLHEFGHALGAVHEHQHPQANIPWNEPLLRSLLSQTGLSDEEINTNFFDRYEAADFHYSAYDRDSVMHFDIPNGLT
LGDFEIINVGKTLSSNDIAVMGAIYADRGNSKFETL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30560; Mature: 30428

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPAVTQGVKLPASCCMRSAGNHQASYDAAIRENPANAPITPAYPSETGADTSQSGRQA
CCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE
RLLVSFSKYWARGRTLKVLFLKNPPASLTAPIVEAARKWLPHINLKFEFVTDGASDIRIG
EEEEEHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEC
FNEHLNWSAIGTDTLLAGPDEATMEFNLKELYTADLKPMPELTRIVLHEFGHALGAVHEH
CCCCCCEEEECCCCEEECCCCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
QHPQANIPWNEPLLRSLLSQTGLSDEEINTNFFDRYEAADFHYSAYDRDSVMHFDIPNGL
CCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCHHHHHCCCCCEEECCCCCCEEEEECCCCC
TLGDFEIINVGKTLSSNDIAVMGAIYADRGNSKFETL
EECCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TAPAVTQGVKLPASCCMRSAGNHQASYDAAIRENPANAPITPAYPSETGADTSQSGRQA
CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE
RLLVSFSKYWARGRTLKVLFLKNPPASLTAPIVEAARKWLPHINLKFEFVTDGASDIRIG
EEEEEHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEC
FNEHLNWSAIGTDTLLAGPDEATMEFNLKELYTADLKPMPELTRIVLHEFGHALGAVHEH
CCCCCCEEEECCCCEEECCCCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC
QHPQANIPWNEPLLRSLLSQTGLSDEEINTNFFDRYEAADFHYSAYDRDSVMHFDIPNGL
CCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCHHHHHCCCCCEEECCCCCCEEEEECCCCC
TLGDFEIINVGKTLSSNDIAVMGAIYADRGNSKFETL
EECCEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA