| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044577
Identifier: 66044577
GI number: 66044577
Start: 1507405
End: 1507782
Strand: Reverse
Name: 66044577
Synonym: Psyr_1329
Alternate gene names: NA
Gene position: 1507782-1507405 (Counterclockwise)
Preceding gene: 66044578
Following gene: 66044576
Centisome position: 24.74
GC content: 60.05
Gene sequence:
>378_bases ATGCGCCAACCCGATATCGAGATTTACCTGAAAGACGAAGACGTCGATCACAAGGCAATCGCCCAGTGGCTCGGCAAAGC GCTGGGCTTTTGCAGCGAATGGAAGCAGAAAGGCCAGACCTGGAAATGCACCGCGGGCACTGTCGCCGTGACCTGGTTGC CCAGAGCGGTCGGCAAATGGAACAGTCTGCACCTGGACAGCGATCAGACCCCGTGGGAAGACGACATCGCCTGTGCTCGC GCCGCATTCAAGGCATTGAACGTCGAAGTACGTTGCGCCCCGGGCACCTGGGTTGAAGAAGAAAGCGACGAGACGGCCGA CCGCTGGATACGCGTGAGTGCCGACGGCGAGGAAGAGATTACCTGGCGAACCGCGTAG
Upstream 100 bases:
>100_bases CGTCGGGCAGCGGTCATCGAGCAACCAGGACCTTTCAAGGTCACCGTTTCCATGCGCTACGATTATTTCGTGCTGCAATA AGCATTCAACAGAGGCCCCC
Downstream 100 bases:
>100_bases GATTTTTCGCCGCGACGTTCCTGATACGTGCCGTCGTCAGGTGAGCCCGGCTCGGCAAGCGGTCATTCAGACGTGATCCG TTCAGCGCGCGCACCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MRQPDIEIYLKDEDVDHKAIAQWLGKALGFCSEWKQKGQTWKCTAGTVAVTWLPRAVGKWNSLHLDSDQTPWEDDIACAR AAFKALNVEVRCAPGTWVEEESDETADRWIRVSADGEEEITWRTA
Sequences:
>Translated_125_residues MRQPDIEIYLKDEDVDHKAIAQWLGKALGFCSEWKQKGQTWKCTAGTVAVTWLPRAVGKWNSLHLDSDQTPWEDDIACAR AAFKALNVEVRCAPGTWVEEESDETADRWIRVSADGEEEITWRTA >Mature_125_residues MRQPDIEIYLKDEDVDHKAIAQWLGKALGFCSEWKQKGQTWKCTAGTVAVTWLPRAVGKWNSLHLDSDQTPWEDDIACAR AAFKALNVEVRCAPGTWVEEESDETADRWIRVSADGEEEITWRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14236; Mature: 14236
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPDIEIYLKDEDVDHKAIAQWLGKALGFCSEWKQKGQTWKCTAGTVAVTWLPRAVGKW CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHCCC NSLHLDSDQTPWEDDIACARAAFKALNVEVRCAPGTWVEEESDETADRWIRVSADGEEEI CEEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCE TWRTA EEECC >Mature Secondary Structure MRQPDIEIYLKDEDVDHKAIAQWLGKALGFCSEWKQKGQTWKCTAGTVAVTWLPRAVGKW CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCHHHCCC NSLHLDSDQTPWEDDIACARAAFKALNVEVRCAPGTWVEEESDETADRWIRVSADGEEEI CEEEECCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCE TWRTA EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA