| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ispG [H]
Identifier: 66044496
GI number: 66044496
Start: 1403345
End: 1404454
Strand: Direct
Name: ispG [H]
Synonym: Psyr_1248
Alternate gene names: 66044496
Gene position: 1403345-1404454 (Clockwise)
Preceding gene: 66044495
Following gene: 66044497
Centisome position: 23.03
GC content: 60.0
Gene sequence:
>1110_bases ATGCACGGCGAATCTCCAATCAAGCGTCGCGAATCCCGGAAAATATGGGTCGGTTCCGTACCGGTAGGCGGTGATGCGCC GATCGCGGTGCAGAGCATGACCAACAGCGATACCAACGATGTCGCCGCTACCGTGGCACAGATCAATCGTCTGGAAGCGG CGGGTGTCGACATCGTGCGTGTTTCGGTGCCGGACATGGACGCTGCCGAAGCATTCGGCCGCATCAAGCAACTGGTCAAG GTGCCGCTGGTCGCCGACATTCACTTCGATCACCGCATCGCCTTGCGTGTGGCGGAGCTGGGCGTCGACTGTCTGCGTAT CAACCCGGGCAACATCGGTCGCGAAGACCGTGTGCGGGCGGTGGTCGATGCTGCACGTGATCGGGGCATCCCGATCCGTA TCGGCGTCAATGCCGGTTCGCTGGAAAAAGACCTGCAGAAGAAGTACGGCGAGCCCACGCCAGAGGCCCTGGTAGAGTCT GCGCTGCGCCATGTCGAGCATCTGCAACGCCTGAACTTTCAGGACTTCAAGGTCAGCGTCAAGGCTTCCGATGTGTTCAT GGCGGTCGCGGCCTATCGGCTGCTGGCCAAGGAGATTGTTCAGCCGCTGCACCTGGGCATCACCGAAGCCGGTGGTCTGC GTTCGGGTACGGTGAAATCGGCTGTCGGTCTCGGTATGCTGCTTGCCGAAGGAATTGGCGATACTATCCGCATCTCGCTG GCGGCTGACCCGGTCGAGGAAGTGAAGGTCGGGTACGACATTCTCAAATCGTTGCGCCTTCGTTCGCGTGGAATCAACTT CATCGCCTGTCCGAGCTGCTCGCGGCAGAACTTCGATGTGGTCAAGACCATGAACGAGCTGGAAGGTCGACTCGAGGATT TGCTGGTGCCGCTCGATGTCGCGGTGATCGGTTGTGTGGTCAATGGTCCGGGCGAAGCCAAAGAGGCGCACATCGGCCTG ACCGGTGGCACGCCGAACCTGATCTACATCGACGGCAAACCCGCGCAGAAACTGACCAATGACAATCTCGTGAATGAGCT GGAACGCTTGATTCGCGAGAAAGCGGCTGAAAAAGCCGAAGCCGACGCCTCGGTCATCGTGCGCGGCTAA
Upstream 100 bases:
>100_bases CTACGCGCGCGGTGCGCAGGTCAGCTACAACGGTCAGCCTGTGGATGTAGCACCTTTTACCAGCGGCGAAACTGCTCGCC TGAAGCTAGGGCAATAAGTC
Downstream 100 bases:
>100_bases CCCGGATTGCTAAGGATTTTTTGTGAGTAAGTCTCTACAAGCCATTCGTGGCATGAACGACATTCTGCCCGAGCAGACGC CGCTGTGGCGTCACTTCGAA
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MHGESPIKRRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLVK VPLVADIHFDHRIALRVAELGVDCLRINPGNIGREDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVES ALRHVEHLQRLNFQDFKVSVKASDVFMAVAAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGL TGGTPNLIYIDGKPAQKLTNDNLVNELERLIREKAAEKAEADASVIVRG
Sequences:
>Translated_369_residues MHGESPIKRRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLVK VPLVADIHFDHRIALRVAELGVDCLRINPGNIGREDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVES ALRHVEHLQRLNFQDFKVSVKASDVFMAVAAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGL TGGTPNLIYIDGKPAQKLTNDNLVNELERLIREKAAEKAEADASVIVRG >Mature_369_residues MHGESPIKRRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVRVSVPDMDAAEAFGRIKQLVK VPLVADIHFDHRIALRVAELGVDCLRINPGNIGREDRVRAVVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVES ALRHVEHLQRLNFQDFKVSVKASDVFMAVAAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGL TGGTPNLIYIDGKPAQKLTNDNLVNELERLIREKAAEKAEADASVIVRG
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=362, Percent_Identity=70.9944751381215, Blast_Score=530, Evalue=1e-152,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 39751; Mature: 39751
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGESPIKRRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVR CCCCCCCHHCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE VSVPDMDAAEAFGRIKQLVKVPLVADIHFDHRIALRVAELGVDCLRINPGNIGREDRVRA EECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHH VVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESALRHVEHLQRLNFQDFKVSV HHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE KASDVFMAVAAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDV ECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVIGCVVNGPGEAKEAHIGLTGGTPNLIYIDGKPAQKLTNDNLVNELERLIREKAAEKAE EEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHC ADASVIVRG CCCEEEEEC >Mature Secondary Structure MHGESPIKRRESRKIWVGSVPVGGDAPIAVQSMTNSDTNDVAATVAQINRLEAAGVDIVR CCCCCCCHHCCCCEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEE VSVPDMDAAEAFGRIKQLVKVPLVADIHFDHRIALRVAELGVDCLRINPGNIGREDRVRA EECCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHH VVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPEALVESALRHVEHLQRLNFQDFKVSV HHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE KASDVFMAVAAYRLLAKEIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE AADPVEEVKVGYDILKSLRLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDV ECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVIGCVVNGPGEAKEAHIGLTGGTPNLIYIDGKPAQKLTNDNLVNELERLIREKAAEKAE EEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHC ADASVIVRG CCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA