| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yfhJ [C]
Identifier: 66044491
GI number: 66044491
Start: 1399648
End: 1399848
Strand: Direct
Name: yfhJ [C]
Synonym: Psyr_1243
Alternate gene names: 66044491
Gene position: 1399648-1399848 (Clockwise)
Preceding gene: 66044490
Following gene: 66044492
Centisome position: 22.97
GC content: 55.72
Gene sequence:
>201_bases ATGAGTCTCAAATGGGTTGATGTTCAGGAAATCGCCATCCAGCTGGCTGAAAGCCACCCGGAGGTAAATCCGCTCACCGT GAGCTTCCCCAGGCTGCGTGGTCTGGTCATGGCCTTGCCTGAATTCGATGACCATCCGGACCGCAGCGGGGAAAAGGTCC TGGAAGCGATCCAGACATTGTGGATCGAAGAGCTGGATTGA
Upstream 100 bases:
>100_bases CCTGTCAGGCCATTGTCGGCAACGAAGACCTGACGGTCGAAATACCCAAGTATTCGCTCAACCACGCCGCTGAAGCGCCG CACTGATTCAAGGATTGCTC
Downstream 100 bases:
>100_bases CGTTCAGTAACGCGCGCAGTTAGGCAATACACCAGAACCCGCGTATAATTCGCGGGTTTAATTTTTCGCTTCAATCACTG CTTCTGGAGTTTCACCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MSLKWVDVQEIAIQLAESHPEVNPLTVSFPRLRGLVMALPEFDDHPDRSGEKVLEAIQTLWIEELD
Sequences:
>Translated_66_residues MSLKWVDVQEIAIQLAESHPEVNPLTVSFPRLRGLVMALPEFDDHPDRSGEKVLEAIQTLWIEELD >Mature_65_residues SLKWVDVQEIAIQLAESHPEVNPLTVSFPRLRGLVMALPEFDDHPDRSGEKVLEAIQTLWIEELD
Specific function: Unknown
COG id: COG2975
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfhJ [H]
Homologues:
Organism=Escherichia coli, GI1788873, Length=64, Percent_Identity=42.1875, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007479 [H]
Pfam domain/function: PF04384 DUF528 [H]
EC number: NA
Molecular weight: Translated: 7554; Mature: 7423
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKWVDVQEIAIQLAESHPEVNPLTVSFPRLRGLVMALPEFDDHPDRSGEKVLEAIQTL CCCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH WIEELD HHHCCC >Mature Secondary Structure SLKWVDVQEIAIQLAESHPEVNPLTVSFPRLRGLVMALPEFDDHPDRSGEKVLEAIQTL CCCCCCHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH WIEELD HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809750; 10984043 [H]