| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044450
Identifier: 66044450
GI number: 66044450
Start: 1357344
End: 1357784
Strand: Direct
Name: 66044450
Synonym: Psyr_1199
Alternate gene names: NA
Gene position: 1357344-1357784 (Clockwise)
Preceding gene: 66044449
Following gene: 66044451
Centisome position: 22.27
GC content: 63.72
Gene sequence:
>441_bases ATGTCATCGATGGATTTCAGTGAGTTCGAGGAGGTCGTCGGCCTGTGGCGTGATCAGCGTCCGGCGAGCCCGCTCGACTG CTGGGTCGACGACGCCAACGCACGGCTGGAAAGGGTGGGTGGCGGAGTCCGTTGCAGCATCGAGTTACTCGACCCCTATG ACGCCAACGACCCTCAGCGTATCGAAGCATTGCTCAGTCACGGCGGTGCCAGCCTGGCGTGCGCCTGTGACGGCGCGTTC GCCATCGATCCGCAAACGCGCTGCATGGTGCTGGTCAGCTGGATGCCTGGCCCCTGCAGCCTTGCCGATCTGCTGAACCG TCTGGAAAGCCTGGCCAATCAGCGCGCGGCCTTGCTCAGCCTGATGCACACCACTCTGGTCAATTCCGTGCCCGCCTTAG CCGGGCGCACGACCCTCAATCACCGGCAACCGGGAGTTTGA
Upstream 100 bases:
>100_bases GCCGACGACATCGATGCCTTCAGTGAGGCGAGCCAGCAGGCTGCGGTCAGCTCCAACATCGCTGATCAATGCCAGCAGGC TGGTTATAAAATGACCAAAA
Downstream 100 bases:
>100_bases AATGCGCAAGGCCTTGATGTGGTTGCCTTTATTGTTGATCGGGCTGTCCCCCGCCACGTGGGCGGTGACCCCCGAAGCCT GGAAACATACGGCTTACGCC
Product: type III secretion protein HrpG
Products: NA
Alternate protein names: Type III Secretion Component Protein HrpG
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSSMDFSEFEEVVGLWRDQRPASPLDCWVDDANARLERVGGGVRCSIELLDPYDANDPQRIEALLSHGGASLACACDGAF AIDPQTRCMVLVSWMPGPCSLADLLNRLESLANQRAALLSLMHTTLVNSVPALAGRTTLNHRQPGV
Sequences:
>Translated_146_residues MSSMDFSEFEEVVGLWRDQRPASPLDCWVDDANARLERVGGGVRCSIELLDPYDANDPQRIEALLSHGGASLACACDGAF AIDPQTRCMVLVSWMPGPCSLADLLNRLESLANQRAALLSLMHTTLVNSVPALAGRTTLNHRQPGV >Mature_145_residues SSMDFSEFEEVVGLWRDQRPASPLDCWVDDANARLERVGGGVRCSIELLDPYDANDPQRIEALLSHGGASLACACDGAFA IDPQTRCMVLVSWMPGPCSLADLLNRLESLANQRAALLSLMHTTLVNSVPALAGRTTLNHRQPGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15807; Mature: 15676
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMDFSEFEEVVGLWRDQRPASPLDCWVDDANARLERVGGGVRCSIELLDPYDANDPQR CCCCCHHHHHHHHHHHCCCCCCCCCHHEECCHHHHHHHCCCCEEEEEEEECCCCCCCHHH IEALLSHGGASLACACDGAFAIDPQTRCMVLVSWMPGPCSLADLLNRLESLANQRAALLS HHHHHHCCCCEEEEEECCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH LMHTTLVNSVPALAGRTTLNHRQPGV HHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SSMDFSEFEEVVGLWRDQRPASPLDCWVDDANARLERVGGGVRCSIELLDPYDANDPQR CCCCHHHHHHHHHHHCCCCCCCCCHHEECCHHHHHHHCCCCEEEEEEEECCCCCCCHHH IEALLSHGGASLACACDGAFAIDPQTRCMVLVSWMPGPCSLADLLNRLESLANQRAALLS HHHHHHCCCCEEEEEECCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH LMHTTLVNSVPALAGRTTLNHRQPGV HHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA