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The map label for this gene is HrcC [H]

Identifier: 66044451

GI number: 66044451

Start: 1357786

End: 1359888

Strand: Direct

Name: HrcC [H]

Synonym: Psyr_1200

Alternate gene names: 66044451

Gene position: 1357786-1359888 (Clockwise)

Preceding gene: 66044450

Following gene: 66044452

Centisome position: 22.28

GC content: 60.29

Gene sequence:

>2103_bases
ATGCGCAAGGCCTTGATGTGGTTGCCTTTATTGTTGATCGGGCTGTCCCCCGCCACGTGGGCGGTGACCCCCGAAGCCTG
GAAACATACGGCTTACGCCTACGATGCCCGGCAGACCGAGCTGGCGACAGCGCTGGCCGACTTCGCCAAGGAATTCGGCA
TGGCGCTGGATATGCCGCCCATTCCCGGGGTCCTTGATGACCGGATACGCGCTCAGAGCCCGGAAGAGTTTCTCGACCGC
CTGGGCCAGGAATATCACTTCCAGTGGTTTGTGTATAACGACACGTTGTACGTCAGCCCCTCCAGCGAGCACACCTCGGC
ACGCATCGAAGTGTCATCCGACGCGGTAGATGACCTGCAGACTGCCTTGACCGATGTAGGGCTGCTGGACAAGCGCTTCG
GGTGGGGGGTACTGCCGAACGAGGGCGTGGTTCTGGTTCGTGGCCCGGCAAAATATGTGGAACTGGTGCGCGATTACAGC
AAGAAAGTCGAAGCGCCGGAAAAGGGCGACAAGCAGGACATCATCGTATTCCCGCTCAAGTACGCCAGTGCCGCGGACCG
CACCATTCGCTATCGCGATCAACAACTGGTGGTCGCCGGGGTGGCCAGTATTCTCCAGGATTTGCTGGATACCCGTTCTC
GTGGCGGGTCGATCAATGGTATGGATCTGCTGGGGCGAGGCGGTCGCGGTAACGGCCTGGCGGGCGGTGGCAGCCCGGAC
GCTCCGAGTCTGCCGATGAGCTCCAGCGGCCTCGATACCAATGCGTTGGAGCAGGGCCTCGATCAGGTGCTGCACTATGG
CGGCGGCGGCAAAAGCGCTGGAAAAAGCCGCTCTGGCGGTCGGGCCAACATCCGTGTAACGGCCGATGTCCGTAACAACG
CCGTGCTGATCTACGACTTGCCCTCGCGCAAGGCCATGTACGAAAAGCTCATCAAAGAGCTGGATGTTTCGCGCAACCTG
ATCGAAATCGACGCCGTGATCCTCGACATCGATCGCAACGAGCTGGCAGAACTGTCCAGCCGCTGGAACTTCAATGCCGG
GAGTGTCAACGGGGGCGCCAACATGTTCGACGCTGGCACCAGCTCCACCCTGTTCATTCAGAACGCCGGCAAGTTCGCTG
CCGAACTGCATGCGCTGGAAGGTAACGGTTCAGCCTCGGTGATCGGCAACCCGTCCATTCTTACCCTTGAAAACCAGCCG
GCCGTGATCGACTTCAGTCGCACCGAATACCTCACCGCGACGTCGGAACGCGTGGCCAATATCGAGCCCATCACCGCAGG
CACCAGTTTGCAGGTGACTCCGCGCTCGCTGGATCACGATGGCAAGCCTCAGGTGCAACTGATCGTCGATATCGAGGATG
GTCAGATCGACATCTCCGACATCAATGACACGCAGCCAAGTGTGCGCAAAGGCAATGTCAGTACCCAGGCCGTCATAGCC
GAACACGGTTCACTGGTCATCGGCGGTTTCCATGGCCTTGAAGCCAACGACAAGGTCCACAAGGTTCCGTTGCTGGGCGA
CATCCCCTACATCGGCAAACTGCTGTTCCAGTCCCGCAGCCGTGAACTGAGCCAGCGCGAGCGCCTGTTCATTCTGACGC
CAAGACTGATTGGCGACCAGGTCAACCCGGCTCGCTATGTGCAGAACGGCAACCCTCACGATGTCGATGATCAGATGAAA
AGGATCAAGGAACGGCGTGACGGCGGTGAGCTGCCTACCCGCGGCGACATTCAGAAAGTCTTCACGCAGATGGTCGATGG
CGCTGCGCCAGAGGGCATGCATGATGGCGAAACACTGCCCTTTGAAACCGACAGCCTGTGTGACCCGGGTCAGGGCCTGA
GCCTCGATGGCCAGCGCTCGCAATGGTATGCACGCAAGGACTGGGGTGTGGCCGTCGTGGTAGCGCGTAACAATACCGAC
AAACCGGTGCGCATCGACGAGAGTCGTTGCGGTGGTCGCTGGGTCATCGGCGTCGCCGCCTGGCCCCACGCATGGCTGCA
ACCGGGCGAGGAGAGCGAAGTGTATATCGCGGTACGTCAGCCACAGATATCGAAAATGGCCAAAGAGAGCCGGCCATCAC
TGCTCCGGGGGGCAAAGCCATGA

Upstream 100 bases:

>100_bases
CGCGCGGCCTTGCTCAGCCTGATGCACACCACTCTGGTCAATTCCGTGCCCGCCTTAGCCGGGCGCACGACCCTCAATCA
CCGGCAACCGGGAGTTTGAA

Downstream 100 bases:

>100_bases
AGATCAGCAGCGTTGCAATCGTGTTGGTGGTGTTCGCTACCCTGACCGGGTGCGCCACCCACGGTTGTTCGGGAACTGCC
TGCAAACGCCCGGACTCCAC

Product: outer-membrane type III secretion protein HrcC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPPIPGVLDDRIRAQSPEEFLDR
LGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYS
KKVEAPEKGDKQDIIVFPLKYASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDLLGRGGRGNGLAGGGSPD
APSLPMSSSGLDTNALEQGLDQVLHYGGGGKSAGKSRSGGRANIRVTADVRNNAVLIYDLPSRKAMYEKLIKELDVSRNL
IEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDAGTSSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQP
AVIDFSRTEYLTATSERVANIEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAVIA
EHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQVNPARYVQNGNPHDVDDQMK
RIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLPFETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTD
KPVRIDESRCGGRWVIGVAAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP

Sequences:

>Translated_700_residues
MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPPIPGVLDDRIRAQSPEEFLDR
LGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYS
KKVEAPEKGDKQDIIVFPLKYASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDLLGRGGRGNGLAGGGSPD
APSLPMSSSGLDTNALEQGLDQVLHYGGGGKSAGKSRSGGRANIRVTADVRNNAVLIYDLPSRKAMYEKLIKELDVSRNL
IEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDAGTSSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQP
AVIDFSRTEYLTATSERVANIEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAVIA
EHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQVNPARYVQNGNPHDVDDQMK
RIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLPFETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTD
KPVRIDESRCGGRWVIGVAAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP
>Mature_700_residues
MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPPIPGVLDDRIRAQSPEEFLDR
LGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQTALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYS
KKVEAPEKGDKQDIIVFPLKYASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDLLGRGGRGNGLAGGGSPD
APSLPMSSSGLDTNALEQGLDQVLHYGGGGKSAGKSRSGGRANIRVTADVRNNAVLIYDLPSRKAMYEKLIKELDVSRNL
IEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDAGTSSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQP
AVIDFSRTEYLTATSERVANIEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAVIA
EHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQVNPARYVQNGNPHDVDDQMK
RIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLPFETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTD
KPVRIDESRCGGRWVIGVAAWPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP

Specific function: Involved in the secretion of a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=304, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1789793, Length=294, Percent_Identity=26.530612244898, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR004845
- InterPro:   IPR003522 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 76433; Mature: 76433

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00875 T2SP_D

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPP
CCCHHHHHHHHHHCCCCCCEEECHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCEECCCC
IPGVLDDRIRAQSPEEFLDRLGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQ
CCCHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECEEEECCCCCCCEEEEEECCCHHHHHH
TALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYSKKVEAPEKGDKQDIIVFPLK
HHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
YASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDLLGRGGRGNGLAGGGSPD
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCCCCCCC
APSLPMSSSGLDTNALEQGLDQVLHYGGGGKSAGKSRSGGRANIRVTADVRNNAVLIYDL
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEC
PSRKAMYEKLIKELDVSRNLIEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDAGT
CCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCEECCCC
SSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYLTATSERVAN
CCEEEEECCCCCEEEEEEECCCCCEEEECCCCEEEECCCCCEEEECCCEEEEECHHHHCC
IEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAVIA
CCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEE
EHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQ
CCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCC
VNPARYVQNGNPHDVDDQMKRIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLP
CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
FETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGVAA
CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCEEECCCCCCCEEEEEEEE
WPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP
CCHHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MRKALMWLPLLLIGLSPATWAVTPEAWKHTAYAYDARQTELATALADFAKEFGMALDMPP
CCCHHHHHHHHHHCCCCCCEEECHHHHHCCEEEECCHHHHHHHHHHHHHHHHCCEECCCC
IPGVLDDRIRAQSPEEFLDRLGQEYHFQWFVYNDTLYVSPSSEHTSARIEVSSDAVDDLQ
CCCHHHHHHHCCCHHHHHHHCCCCEEEEEEEEECEEEECCCCCCCEEEEEECCCHHHHHH
TALTDVGLLDKRFGWGVLPNEGVVLVRGPAKYVELVRDYSKKVEAPEKGDKQDIIVFPLK
HHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
YASAADRTIRYRDQQLVVAGVASILQDLLDTRSRGGSINGMDLLGRGGRGNGLAGGGSPD
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCCCCCCC
APSLPMSSSGLDTNALEQGLDQVLHYGGGGKSAGKSRSGGRANIRVTADVRNNAVLIYDL
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEC
PSRKAMYEKLIKELDVSRNLIEIDAVILDIDRNELAELSSRWNFNAGSVNGGANMFDAGT
CCHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCEECCCC
SSTLFIQNAGKFAAELHALEGNGSASVIGNPSILTLENQPAVIDFSRTEYLTATSERVAN
CCEEEEECCCCCEEEEEEECCCCCEEEECCCCEEEECCCCCEEEECCCEEEEECHHHHCC
IEPITAGTSLQVTPRSLDHDGKPQVQLIVDIEDGQIDISDINDTQPSVRKGNVSTQAVIA
CCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEE
EHGSLVIGGFHGLEANDKVHKVPLLGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQ
CCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCC
VNPARYVQNGNPHDVDDQMKRIKERRDGGELPTRGDIQKVFTQMVDGAAPEGMHDGETLP
CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
FETDSLCDPGQGLSLDGQRSQWYARKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGVAA
CCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCEEECCCCCCCEEEEEEEE
WPHAWLQPGEESEVYIAVRQPQISKMAKESRPSLLRGAKP
CCHHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1400238; 7579617 [H]