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The map label for this gene is HrpF

Identifier: 66044449

GI number: 66044449

Start: 1357142

End: 1357366

Strand: Direct

Name: HrpF

Synonym: Psyr_1198

Alternate gene names: NA

Gene position: 1357142-1357366 (Clockwise)

Preceding gene: 66044448

Following gene: 66044450

Centisome position: 22.27

GC content: 52.44

Gene sequence:

>225_bases
ATGATAAATTTCAAATCCCTGCAAAATAACCTCGATTCCACGCTCACCCGCGCGTTGTCCGACGTGGATGACGTGCTGGA
CGGGGGCAATGGGCATTTCACCGCCGACGACATCGATGCCTTCAGTGAGGCGAGCCAGCAGGCTGCGGTCAGCTCCAACA
TCGCTGATCAATGCCAGCAGGCTGGTTATAAAATGACCAAAAATGTCATCGATGGATTTCAGTGA

Upstream 100 bases:

>100_bases
CGGAGCCGGCTGCCTGAAACAGACTCTTGCGGCGAAAATGGAACCGCTCCACCTGTTTGCTCCACTCAAGGTTTGAACCT
TTCTGATGGAGTATCAGGAC

Downstream 100 bases:

>100_bases
GTTCGAGGAGGTCGTCGGCCTGTGGCGTGATCAGCGTCCGGCGAGCCCGCTCGACTGCTGGGTCGACGACGCCAACGCAC
GGCTGGAAAGGGTGGGTGGC

Product: type III secretion protein HrpF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MINFKSLQNNLDSTLTRALSDVDDVLDGGNGHFTADDIDAFSEASQQAAVSSNIADQCQQAGYKMTKNVIDGFQ

Sequences:

>Translated_74_residues
MINFKSLQNNLDSTLTRALSDVDDVLDGGNGHFTADDIDAFSEASQQAAVSSNIADQCQQAGYKMTKNVIDGFQ
>Mature_74_residues
MINFKSLQNNLDSTLTRALSDVDDVLDGGNGHFTADDIDAFSEASQQAAVSSNIADQCQQAGYKMTKNVIDGFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7958; Mature: 7958

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINFKSLQNNLDSTLTRALSDVDDVLDGGNGHFTADDIDAFSEASQQAAVSSNIADQCQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGYKMTKNVIDGFQ
HHHHHHHHHHCCCC
>Mature Secondary Structure
MINFKSLQNNLDSTLTRALSDVDDVLDGGNGHFTADDIDAFSEASQQAAVSSNIADQCQQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AGYKMTKNVIDGFQ
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA