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The map label for this gene is HrpE

Identifier: 66044448

GI number: 66044448

Start: 1356477

End: 1357058

Strand: Direct

Name: HrpE

Synonym: Psyr_1197

Alternate gene names: NA

Gene position: 1356477-1357058 (Clockwise)

Preceding gene: 66044447

Following gene: 66044449

Centisome position: 22.26

GC content: 62.2

Gene sequence:

>582_bases
ATGCTTGCCAAACGCAGTATTACCCTGACTGCCGACGCGGTGCTGCCCGAGCCGGTATTGCGCCGTGAATACATCGCCAA
CAGCCTGCTGGCTCGCGATATTCTGACTGACGCGCAACGTCAGGCGGAGCAGATGCTGGTACTTGAGCAGGCTAAAGCCG
ATCGTCGGCATCAGGAGGCGCTTGCGCAGTTCTGGGAGCGCGCCAATGCCTTTCTGGACGAGCTGCACGTCCAGCGCGAA
GCCTTGCAGCAGCAGGCCATGACTGCTGTAGAGGAGCTGCTGACTGAGGCATTGAGCCAGTTACTCGACGAAACGACCCT
TGCCGAGCGTGCTCGGGCACTGGTCAGGAACCTGGCAGCCAGCCAGCTTAACGAAGCAGTGGCCACACTCAGCGTTCATC
CGGAGATGGCCGAGCCGGTCGCCGAATGGTTGGCAGAGAGCCGTTTTGCCGAGCACTGGGCGCTCAAACGGGATGCGACG
CTGGCCACTGAAAGCCTGCGCTTGAGCGACGCCAACGGCGCTTTCGAAATCGATTGGGCAACGCTGCGCAATGGGCTGGC
AGGCGCGGAGCCGGCTGCCTGA

Upstream 100 bases:

>100_bases
GCGGCCCCCGAAAATAAACTTCAGACGCTGTGGCAGGCTGTTCTATGGCGTGTCACCGCGGCCTGAATATCCGCTTCCCT
CTGCATCAGGAATTCGCACC

Downstream 100 bases:

>100_bases
AACAGACTCTTGCGGCGAAAATGGAACCGCTCCACCTGTTTGCTCCACTCAAGGTTTGAACCTTTCTGATGGAGTATCAG
GACATGATAAATTTCAAATC

Product: type III secretion protein HrpE

Products: NA

Alternate protein names: Type III Secretion Apparatus Protein HrpE/YscL Family; Type III Secretion Component Protein HrpE; HrpE/YscL Family Type III Secretion Apparatus Protein; Type III Secretion Protein; HrpE Protein; Type III Secretion System Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLAKRSITLTADAVLPEPVLRREYIANSLLARDILTDAQRQAEQMLVLEQAKADRRHQEALAQFWERANAFLDELHVQRE
ALQQQAMTAVEELLTEALSQLLDETTLAERARALVRNLAASQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWALKRDAT
LATESLRLSDANGAFEIDWATLRNGLAGAEPAA

Sequences:

>Translated_193_residues
MLAKRSITLTADAVLPEPVLRREYIANSLLARDILTDAQRQAEQMLVLEQAKADRRHQEALAQFWERANAFLDELHVQRE
ALQQQAMTAVEELLTEALSQLLDETTLAERARALVRNLAASQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWALKRDAT
LATESLRLSDANGAFEIDWATLRNGLAGAEPAA
>Mature_193_residues
MLAKRSITLTADAVLPEPVLRREYIANSLLARDILTDAQRQAEQMLVLEQAKADRRHQEALAQFWERANAFLDELHVQRE
ALQQQAMTAVEELLTEALSQLLDETTLAERARALVRNLAASQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWALKRDAT
LATESLRLSDANGAFEIDWATLRNGLAGAEPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21476; Mature: 21476

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKRSITLTADAVLPEPVLRREYIANSLLARDILTDAQRQAEQMLVLEQAKADRRHQEA
CCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALSQLLDETTLAERARALVRNLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWALKRDATLATESLRLSDANGAFEIDWA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCCCEEEHHH
TLRNGLAGAEPAA
HHHCCCCCCCCCC
>Mature Secondary Structure
MLAKRSITLTADAVLPEPVLRREYIANSLLARDILTDAQRQAEQMLVLEQAKADRRHQEA
CCCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQFWERANAFLDELHVQREALQQQAMTAVEELLTEALSQLLDETTLAERARALVRNLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLNEAVATLSVHPEMAEPVAEWLAESRFAEHWALKRDATLATESLRLSDANGAFEIDWA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEECCCCCEEEHHH
TLRNGLAGAEPAA
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA