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The map label for this gene is hopM1

Identifier: 66044437

GI number: 66044437

Start: 1340413

End: 1342569

Strand: Direct

Name: hopM1

Synonym: Psyr_1186

Alternate gene names: 66044437

Gene position: 1340413-1342569 (Clockwise)

Preceding gene: 66044436

Following gene: 66044438

Centisome position: 22.0

GC content: 62.77

Gene sequence:

>2157_bases
ATGATTGGCACACGAGTCGGCGGATCAGGCAGTACCGAAATCGTTCAGGCGAACCAGCCGCAGCCGTCTGCCGCTGTCGC
CCAGGCTCATCCACACGCGGTAAGCCCGAGCAGCAACCCGCCGCTGACCGCCAGCCAGTCGGCCGCGCAAGCGCCGGAAA
GCTCGGCGGCCGGTGCCGCTCGCCTGCCAGTCGCGCCGCGACATCTGCCGACATTGGAGAAGTTTCGTGCCGAACAGCCC
ACCGTACAAGGCACTTCCACGCCGACTATCAGCGCTAACGCGGCCCTGCTGATCGGCAGTCTGTTGCAGTCTGAAAAACT
GCCCTTCGAGGTCATGGCCGCCCGTTTGTCGCCTGAGCGTTATGCGTTGCAGCAGTTTCACGGCTCCGATTTACAGCAAA
TGCTCGGACGATTCGCTGAGCCAGGGCATCTGCCAGGCAAGGCCGAGACCGAACAACTGATCAAGGGCTTTGCCCGGTCG
CTCGCAGACCAGCTGGAGCACTTCCAGCTCATGCATGACGCGACGGCTGAGGCATTCGGCCCCGGAGGGCTGCGCGACCG
CAACACACTGGCGGTCAGTCAAGCGGCGCTTGGCGAATACGCCGGTCGGGCGAGTAAATCCATCGAAGCGGGGCTGAACC
ACAGTCTCGCGGTGCTGGACGAGCGCATCGCCGCGCTGGACAGCCAGTTGGAGGGCGCCACTGAGGACAGCAGACCGGTT
TTGCTGATGGACAGGCAGGCGCTGGAAACGGCCAGGGCGATGCTGAGCGACCTGCACGTCGACTTCTGCAAATCGCCTGA
AGCCAAGCGGTTGAGTGCCGTTGCCGCTCACACGCAAATGGATGCTCTGATCGACAAGCTGAACGTTGATCGCAGCTCGG
TCGGCGGCTGGAAGGGGATCGGTCCGATCGTCGCGGCAGCGGTGCCGCAGTTTATGGTGTCCATGCTCCACCTGGGGTAT
ATCCGCACGGCCACCAGTGACGCGATGAAAGATGCCGTTCCCGAAAAAAGCGCCGACGCCAGCATGAAGAGGGCCCTGGC
CGTAGGACTGACTGCCGGGGTGGCTCACGAGGGCGTTACCAACCTCTTGAAGCCGATGGTGCAGGCCGGGTTTCAGAAAG
CCGGCCTCAACGAGCGGCTGAATATGGTGCCGCTCAAGGGTATTGATACCGACTCGGTGATTCCCGACCCTTTCGAGTTG
AAGAACGACAACGGCGCACTGGTCAGAAAAACGCCTGAGGAAGCCGCTGAGGACAAAGCCTTCGTCGCAAGCGAGCGAGC
GGTTTTGAATCAGAAAAAGGTTCAGGTTTCGTCTACCCATCCACTGGGTGAGATGATCCCCTACGGCGCCTTTGGTGGCG
GGCAGGCGGTACGCCAGATGCTCAATGATTTCAATCTGCTCAATGGCCAGACCCTGTCGGCCAGAGCGGTGACCTCCGGG
ATCGCCGGGGCCATATCAGCCACCACCCAGACCATTGCACAGCTGAACTCGACCTATGTCGATCCGCGCGGGCGCAAGAT
CCCGGTCTTCACCCCGGACCGCGCCAATGCCGACCTGGGCAAGGACCTGGCCAAAGGCCTGGACCTTCGCGAACCGGCGG
TACGCACCGCGTTCTACAGCAAGGCTGTTTCAGGTGTGCAGAGCGCAGCGCTGAACGGCGCGCTACCATCGGTTGCCGTC
CAGCCCCAAGGTGCATCCGGCACGCTCAGCGCGGGGAATATCATGCGCAACATGGCGCTGGCGGCAACCGGTTCGGTGTC
TTACCTGTCGACCCTGTATGCCAACCAGTCGGTCACGGCCGAGGCCAAGGCCCTGAAAGAGGCGGGCATGGGCGGCGCAA
CGCCAATGGTAGCTCGCACTGAAACCGCCCTGAGCAACATCCGCCATCCGGACAGAGCTTCACTGCCGCATACGTTCCAG
CCGGATACCCTGGGTGGCGTCCCCAGGGCCGTGGAAAACGCCTATCACATGGCCCGGGGCGCGCTGCAATTACCGACCCA
GGTGGTGGTCGATACGGTGCGTGTCGTGGAAGACGGCGTAGCAAGCGGGGTGTCCTCGTTGCGCGATGCACATAAACCAG
CGGAAACATCATCGCCAACAGCTGATGACGCCGCTGCTGTCGAACTGACGGCGATGGAGGAGGGCCGCCGACGCTGA

Upstream 100 bases:

>100_bases
ACGGTTTCATGGGGCCGGTGGGTGCTGCGGGCGCCCCGGTCAATATGCCTGCTTCTCAGGCAACCACGCGTGACACTCCT
GCGAGTTCCGGGAGGTTCCA

Downstream 100 bases:

>100_bases
TGAAAGCAACCAGGGCTGAGCCTTTCTTTTGGAACCGACAGCGCCAGGCAGCCACTCACTGCCTGGTCAGCTCAGGCTTT
CTTAAAGGACTATGACAATG

Product: type III effector HopM1

Products: NA

Alternate protein names: Hrp outer protein M1; Type III effector hopPtoM

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MIGTRVGGSGSTEIVQANQPQPSAAVAQAHPHAVSPSSNPPLTASQSAAQAPESSAAGAARLPVAPRHLPTLEKFRAEQP
TVQGTSTPTISANAALLIGSLLQSEKLPFEVMAARLSPERYALQQFHGSDLQQMLGRFAEPGHLPGKAETEQLIKGFARS
LADQLEHFQLMHDATAEAFGPGGLRDRNTLAVSQAALGEYAGRASKSIEAGLNHSLAVLDERIAALDSQLEGATEDSRPV
LLMDRQALETARAMLSDLHVDFCKSPEAKRLSAVAAHTQMDALIDKLNVDRSSVGGWKGIGPIVAAAVPQFMVSMLHLGY
IRTATSDAMKDAVPEKSADASMKRALAVGLTAGVAHEGVTNLLKPMVQAGFQKAGLNERLNMVPLKGIDTDSVIPDPFEL
KNDNGALVRKTPEEAAEDKAFVASERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLNDFNLLNGQTLSARAVTSG
IAGAISATTQTIAQLNSTYVDPRGRKIPVFTPDRANADLGKDLAKGLDLREPAVRTAFYSKAVSGVQSAALNGALPSVAV
QPQGASGTLSAGNIMRNMALAATGSVSYLSTLYANQSVTAEAKALKEAGMGGATPMVARTETALSNIRHPDRASLPHTFQ
PDTLGGVPRAVENAYHMARGALQLPTQVVVDTVRVVEDGVASGVSSLRDAHKPAETSSPTADDAAAVELTAMEEGRRR

Sequences:

>Translated_718_residues
MIGTRVGGSGSTEIVQANQPQPSAAVAQAHPHAVSPSSNPPLTASQSAAQAPESSAAGAARLPVAPRHLPTLEKFRAEQP
TVQGTSTPTISANAALLIGSLLQSEKLPFEVMAARLSPERYALQQFHGSDLQQMLGRFAEPGHLPGKAETEQLIKGFARS
LADQLEHFQLMHDATAEAFGPGGLRDRNTLAVSQAALGEYAGRASKSIEAGLNHSLAVLDERIAALDSQLEGATEDSRPV
LLMDRQALETARAMLSDLHVDFCKSPEAKRLSAVAAHTQMDALIDKLNVDRSSVGGWKGIGPIVAAAVPQFMVSMLHLGY
IRTATSDAMKDAVPEKSADASMKRALAVGLTAGVAHEGVTNLLKPMVQAGFQKAGLNERLNMVPLKGIDTDSVIPDPFEL
KNDNGALVRKTPEEAAEDKAFVASERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLNDFNLLNGQTLSARAVTSG
IAGAISATTQTIAQLNSTYVDPRGRKIPVFTPDRANADLGKDLAKGLDLREPAVRTAFYSKAVSGVQSAALNGALPSVAV
QPQGASGTLSAGNIMRNMALAATGSVSYLSTLYANQSVTAEAKALKEAGMGGATPMVARTETALSNIRHPDRASLPHTFQ
PDTLGGVPRAVENAYHMARGALQLPTQVVVDTVRVVEDGVASGVSSLRDAHKPAETSSPTADDAAAVELTAMEEGRRR
>Mature_718_residues
MIGTRVGGSGSTEIVQANQPQPSAAVAQAHPHAVSPSSNPPLTASQSAAQAPESSAAGAARLPVAPRHLPTLEKFRAEQP
TVQGTSTPTISANAALLIGSLLQSEKLPFEVMAARLSPERYALQQFHGSDLQQMLGRFAEPGHLPGKAETEQLIKGFARS
LADQLEHFQLMHDATAEAFGPGGLRDRNTLAVSQAALGEYAGRASKSIEAGLNHSLAVLDERIAALDSQLEGATEDSRPV
LLMDRQALETARAMLSDLHVDFCKSPEAKRLSAVAAHTQMDALIDKLNVDRSSVGGWKGIGPIVAAAVPQFMVSMLHLGY
IRTATSDAMKDAVPEKSADASMKRALAVGLTAGVAHEGVTNLLKPMVQAGFQKAGLNERLNMVPLKGIDTDSVIPDPFEL
KNDNGALVRKTPEEAAEDKAFVASERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLNDFNLLNGQTLSARAVTSG
IAGAISATTQTIAQLNSTYVDPRGRKIPVFTPDRANADLGKDLAKGLDLREPAVRTAFYSKAVSGVQSAALNGALPSVAV
QPQGASGTLSAGNIMRNMALAATGSVSYLSTLYANQSVTAEAKALKEAGMGGATPMVARTETALSNIRHPDRASLPHTFQ
PDTLGGVPRAVENAYHMARGALQLPTQVVVDTVRVVEDGVASGVSSLRDAHKPAETSSPTADDAAAVELTAMEEGRRR

Specific function: Involved in the suppression of basal resistance and promotion of disease symptoms in plants. May be involved in the inhibition of a host vesicle trafficking pathway

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Host membrane (By similarity). Note=Secreted via the type III secretion system (TTSS). Localized to the plant endomembrane (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HOPM1_PSEU2 (Q4ZX82)

Other databases:

- EMBL:   CP000075
- RefSeq:   YP_234278.1
- STRING:   Q4ZX82
- GeneID:   3366680
- GenomeReviews:   CP000075_GR
- KEGG:   psb:Psyr_1186
- NMPDR:   fig|205918.4.peg.1503
- HOGENOM:   HBG193023
- OMA:   ADQLEHF
- ProtClustDB:   CLSK821685
- BioCyc:   PSYR205918:PSYR_1186-MONOMER
- GO:   GO:0016020
- GO:   GO:0009405

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75226; Mature: 75226

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTRVGGSGSTEIVQANQPQPSAAVAQAHPHAVSPSSNPPLTASQSAAQAPESSAAGAA
CCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
RLPVAPRHLPTLEKFRAEQPTVQGTSTPTISANAALLIGSLLQSEKLPFEVMAARLSPER
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHH
YALQQFHGSDLQQMLGRFAEPGHLPGKAETEQLIKGFARSLADQLEHFQLMHDATAEAFG
HHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGLRDRNTLAVSQAALGEYAGRASKSIEAGLNHSLAVLDERIAALDSQLEGATEDSRPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
LLMDRQALETARAMLSDLHVDFCKSPEAKRLSAVAAHTQMDALIDKLNVDRSSVGGWKGI
EEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCH
GPIVAAAVPQFMVSMLHLGYIRTATSDAMKDAVPEKSADASMKRALAVGLTAGVAHEGVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NLLKPMVQAGFQKAGLNERLNMVPLKGIDTDSVIPDPFELKNDNGALVRKTPEEAAEDKA
HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCEEECCHHHHHHHHH
FVASERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLNDFNLLNGQTLSARAVTSG
HHHHHHHHHHHHHEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
IAGAISATTQTIAQLNSTYVDPRGRKIPVFTPDRANADLGKDLAKGLDLREPAVRTAFYS
HHHHHHHHHHHHHHHHHHEECCCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
KAVSGVQSAALNGALPSVAVQPQGASGTLSAGNIMRNMALAATGSVSYLSTLYANQSVTA
HHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHH
EAKALKEAGMGGATPMVARTETALSNIRHPDRASLPHTFQPDTLGGVPRAVENAYHMARG
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
ALQLPTQVVVDTVRVVEDGVASGVSSLRDAHKPAETSSPTADDAAAVELTAMEEGRRR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCCCCC
>Mature Secondary Structure
MIGTRVGGSGSTEIVQANQPQPSAAVAQAHPHAVSPSSNPPLTASQSAAQAPESSAAGAA
CCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
RLPVAPRHLPTLEKFRAEQPTVQGTSTPTISANAALLIGSLLQSEKLPFEVMAARLSPER
CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHH
YALQQFHGSDLQQMLGRFAEPGHLPGKAETEQLIKGFARSLADQLEHFQLMHDATAEAFG
HHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PGGLRDRNTLAVSQAALGEYAGRASKSIEAGLNHSLAVLDERIAALDSQLEGATEDSRPV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE
LLMDRQALETARAMLSDLHVDFCKSPEAKRLSAVAAHTQMDALIDKLNVDRSSVGGWKGI
EEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCH
GPIVAAAVPQFMVSMLHLGYIRTATSDAMKDAVPEKSADASMKRALAVGLTAGVAHEGVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
NLLKPMVQAGFQKAGLNERLNMVPLKGIDTDSVIPDPFELKNDNGALVRKTPEEAAEDKA
HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCEECCCCCEEECCHHHHHHHHH
FVASERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLNDFNLLNGQTLSARAVTSG
HHHHHHHHHHHHHEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH
IAGAISATTQTIAQLNSTYVDPRGRKIPVFTPDRANADLGKDLAKGLDLREPAVRTAFYS
HHHHHHHHHHHHHHHHHHEECCCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
KAVSGVQSAALNGALPSVAVQPQGASGTLSAGNIMRNMALAATGSVSYLSTLYANQSVTA
HHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHH
EAKALKEAGMGGATPMVARTETALSNIRHPDRASLPHTFQPDTLGGVPRAVENAYHMARG
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
ALQLPTQVVVDTVRVVEDGVASGVSSLRDAHKPAETSSPTADDAAAVELTAMEEGRRR
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA