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The map label for this gene is 66044436

Identifier: 66044436

GI number: 66044436

Start: 1339922

End: 1340416

Strand: Direct

Name: 66044436

Synonym: Psyr_1185

Alternate gene names: NA

Gene position: 1339922-1340416 (Clockwise)

Preceding gene: 66044434

Following gene: 66044437

Centisome position: 21.99

GC content: 57.98

Gene sequence:

>495_bases
ATGAACAGAAATGATGCATATCACACGCTTATCAGTGAGATTTGCGCGCTCAGTCTGATCTCCGAACCTGAACGTTTTTA
CGAGTCAGCCAATTTCAAAATCAGCGACGTCGACTTCACCCTTCACTATCAGGACCGCGACGAGGGGCGTGCGATTCTCA
TCTACGGGGATATGGGCGCGCTGCCCGCGCGCAATCGTGACAGCGCCTTGCTGGCGTTGATGGACATCAACTTTCATATG
TTTTCGGGGGCCCACAGCCCGGCTTTCTCCTGGAATGCCCAGACCGGCCGAGTGCTGCTGATGGGATCGATAGGCCTTGA
ACGAGCGACAGCCGAGGGCGTGCTGTTGCTGATGAAGTCCTTTGCCGACCTGGCCAGAGAGTGGCGCGAGCACGGTTTCA
TGGGGCCGGTGGGTGCTGCGGGCGCCCCGGTCAATATGCCTGCTTCTCAGGCAACCACGCGTGACACTCCTGCGAGTTCC
GGGAGGTTCCAATGA

Upstream 100 bases:

>100_bases
CACCTCGCCCCAAGGAACCAAAACCCCTTGCCCTCCGACTCAGTGCGTACACGCCAGCAAAAAAATGGTGTGGACCCACA
TCGCACTCAGAGGCCGTGAA

Downstream 100 bases:

>100_bases
TTGGCACACGAGTCGGCGGATCAGGCAGTACCGAAATCGTTCAGGCGAACCAGCCGCAGCCGTCTGCCGCTGTCGCCCAG
GCTCATCCACACGCGGTAAG

Product: effector locus protein

Products: NA

Alternate protein names: Type III Chaperone ShcM; TIR Chaperone Family Protein; Effector Locus Protein

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNRNDAYHTLISEICALSLISEPERFYESANFKISDVDFTLHYQDRDEGRAILIYGDMGALPARNRDSALLALMDINFHM
FSGAHSPAFSWNAQTGRVLLMGSIGLERATAEGVLLLMKSFADLAREWREHGFMGPVGAAGAPVNMPASQATTRDTPASS
GRFQ

Sequences:

>Translated_164_residues
MNRNDAYHTLISEICALSLISEPERFYESANFKISDVDFTLHYQDRDEGRAILIYGDMGALPARNRDSALLALMDINFHM
FSGAHSPAFSWNAQTGRVLLMGSIGLERATAEGVLLLMKSFADLAREWREHGFMGPVGAAGAPVNMPASQATTRDTPASS
GRFQ
>Mature_164_residues
MNRNDAYHTLISEICALSLISEPERFYESANFKISDVDFTLHYQDRDEGRAILIYGDMGALPARNRDSALLALMDINFHM
FSGAHSPAFSWNAQTGRVLLMGSIGLERATAEGVLLLMKSFADLAREWREHGFMGPVGAAGAPVNMPASQATTRDTPASS
GRFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18014; Mature: 18014

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNDAYHTLISEICALSLISEPERFYESANFKISDVDFTLHYQDRDEGRAILIYGDMGA
CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECEEEEEEECCCCCCCEEEEEECCCC
LPARNRDSALLALMDINFHMFSGAHSPAFSWNAQTGRVLLMGSIGLERATAEGVLLLMKS
CCCCCCCCEEEEEEECCEEEECCCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHH
FADLAREWREHGFMGPVGAAGAPVNMPASQATTRDTPASSGRFQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRNDAYHTLISEICALSLISEPERFYESANFKISDVDFTLHYQDRDEGRAILIYGDMGA
CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECEEEEEEECCCCCCCEEEEEECCCC
LPARNRDSALLALMDINFHMFSGAHSPAFSWNAQTGRVLLMGSIGLERATAEGVLLLMKS
CCCCCCCCEEEEEEECCEEEECCCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHHHHHH
FADLAREWREHGFMGPVGAAGAPVNMPASQATTRDTPASSGRFQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA