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The map label for this gene is 66044434

Identifier: 66044434

GI number: 66044434

Start: 1336758

End: 1338209

Strand: Direct

Name: 66044434

Synonym: Psyr_1183

Alternate gene names: NA

Gene position: 1336758-1338209 (Clockwise)

Preceding gene: 66044426

Following gene: 66044436

Centisome position: 21.94

GC content: 61.91

Gene sequence:

>1452_bases
ATGCACATCAACCGAACCGGCAGCTCGCAGCCCAGCATCGAGCTGGAGCGCTTTTATTCCGCATCGCAATCATTGGCCTC
CAGTTCCGTACGCGAGCTCAGCCCTGCCGAACACGCTAATCTGCAAGCCATTACCGATTACCTGAAAGATCATGTATTCG
CTGCGCACAAACTGCCGTTGAGTGAGTCGGCCGTCGATCAGGATGCCGTTCATGCGCACAACGAGCAACTCGACAAGATC
ATCGATGCTCGCGCCAGACGCTTGCTGGACGAGGGCGAAACGCCTGCCACCATTGCCGACACCTTCGCCAAGGCGGAGAA
GTTCGACAGGATGGCAACCACCGCTTCGATCACGCTGCGCGCCACGCCGTTTGCCGCTGCGTCGGTGCTGCAATACATGC
AGCCTGCCATCAACAAGGGCGACTGGCTGCCGATGCCGCTCAAACCCCTGACGCCATTTGTGTCCGGGGCGCTGTCCGGG
ATCATGGATCAGGTCGGCACTACGGTCATGAATCGCGCCACGGGCAACCTGCACTACCTGAGTACCCCGCCTGAGAAACT
GCATGATGCGATGGCGGCTTCCGTGAAGCGTCATTCGCCGGGTGTCATGCGTCAGGCGGTGGATCTGGGTATTGCCATCC
AGGCTTACAGCGCGCGAAATGCGGTGCGTACCGTGCTGGCGCCAGCACTGGCATCCAGACCCGCCGTGCAGGGTGCGGTC
GACATCAGCGTGTCGGCGGCAGGTGGCCTGGCGGCCAACGCGGGGTTCGGCAATCGTATGCACAGTGTGCAGGCGCGTGA
TCACTTGCGCGGCGGTGCGTTCGTGCTCGGCATCAAGGACCAGGAACCCAAGGCAGACTTGAGTGAAGAAACCGACTGGC
TCGTGGCTTACAAAGCGATCAAGTCAGCCAGCTACTCCGGCGCGGCGCTGAACGCAGGCAAGCGGGTGGCTGGCCTGCCG
CTGGACGTCGCCACCGACGGCCTGAAAGCGGTGAGAAGCCTGGTGTCGGCCACCGGTCTGGCGCAAAACGGGCTGGCCCT
GGCAGGCGGCTTTGCCGGCGTGGGCAAATTGCAGGAGATGGCGACCAAAAATATCACTGATCCGGCCACCAAGGCGGCGG
TCAGCCAACTGACCAATATGGCCGCCTCGACAGGCGTTTTTGCGGCCTGGACCACCGCAGCGGTCGCAACCGATCCCGCG
GTGAAAAAAGCTGAGTCGTTCTTGCAGGATACGGTCAAATCGGCGGCGTCGAGTTCGACCAGCTATGTAGCTGACCAGAC
TGTCAAGCTGGCCAAGGCGGGCATTGACGCGAGTGGTGAGGCGATTGCTGCGACGGGGGCATCCTTGCTTGACACATTAC
GTCGTCGCAATGCTCGTGAGCCGGACATCGAAGAGGGTGGCATTGCAGCGGGTTCACCGAGCGCGGTGCCGTTCCAGCCA
GGGCGCTCATAA

Upstream 100 bases:

>100_bases
GACCGACGCCTCATTGCCTTGCCTGTTCGCAAGCAAGTCGTCCGGCCAGACTCGTCTCGGCGCGTTGCTACGCAACTTAA
GCAATAGAGAGGGAGTTTCA

Downstream 100 bases:

>100_bases
GCGTTTCGACCCATAGCCGGTAAAGCAAAGGGGCGCCTTCCACGGAGTGCGCCCCTTTGCTTGTTTCTCATGTATGCGTC
GTATCAGAGCTCGGTGTGCT

Product: type III effector HopAA1

Products: NA

Alternate protein names: Type III Effector Protein

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPLSESAVDQDAVHAHNEQLDKI
IDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLRATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSG
IMDQVGTTVMNRATGNLHYLSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAV
DISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAIKSASYSGAALNAGKRVAGLP
LDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPA
VKKAESFLQDTVKSAASSSTSYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQP
GRS

Sequences:

>Translated_483_residues
MHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPLSESAVDQDAVHAHNEQLDKI
IDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLRATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSG
IMDQVGTTVMNRATGNLHYLSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAV
DISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAIKSASYSGAALNAGKRVAGLP
LDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPA
VKKAESFLQDTVKSAASSSTSYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQP
GRS
>Mature_483_residues
MHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPLSESAVDQDAVHAHNEQLDKI
IDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLRATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSG
IMDQVGTTVMNRATGNLHYLSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAV
DISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAIKSASYSGAALNAGKRVAGLP
LDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPA
VKKAESFLQDTVKSAASSSTSYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQP
GRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50257; Mature: 50257

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHCCCC
SESAVDQDAVHAHNEQLDKIIDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLR
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEE
ATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSGIMDQVGTTVMNRATGNLHYL
ECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
STPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCEE
DISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAI
EEEEECCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
KSASYSGAALNAGKRVAGLPLDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEM
HHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHH
ATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPAVKKAESFLQDTVKSAASSST
HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
SYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQP
HHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GRS
CCC
>Mature Secondary Structure
MHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHCCCC
SESAVDQDAVHAHNEQLDKIIDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLR
CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEEE
ATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSGIMDQVGTTVMNRATGNLHYL
ECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
STPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCEE
DISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAI
EEEEECCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH
KSASYSGAALNAGKRVAGLPLDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEM
HHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHH
ATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPAVKKAESFLQDTVKSAASSST
HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
SYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQP
HHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GRS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA