| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is zwf [H]
Identifier: 66044371
GI number: 66044371
Start: 1269242
End: 1270711
Strand: Direct
Name: zwf [H]
Synonym: Psyr_1120
Alternate gene names: 66044371
Gene position: 1269242-1270711 (Clockwise)
Preceding gene: 66044369
Following gene: 66044372
Centisome position: 20.83
GC content: 58.91
Gene sequence:
>1470_bases ATGCCCTTGATTACGGTTGAACCGTGCACATTTGCCCTGTTTGGTGCCTTGGGGGACCTTGCGGTACGCAAGCTGTTCCC GGCTCTTTATCAGCTTGATCGCGCTGGACTGCTGCATGAAGACACAAAAATTCTTGCCCTGGCGCGTGAACCAGGCGACG AAGAGTCGCATCTGGCGTACATCGAAAAATCCATGCGCCGCTTCATTCCCGAGACGGAGCTGGAGCCGGACAACCTGAGC CGCTTTCTGGCGCGTCTCAGCTATCTGCATGTCGACTTTCTCAAGGCCGAGGATTACGTTGCGCTCGCCGAGCGTGTCGG CAATGCCGAAACCCTGATCGCCTATTTCGCCACACCGGCCTCGGTCTATGGCGCCATCTGCGAGAACCTCGCGTCGGTCA ATCTCGCCGAACGCACGCGTGCCGTACTGGAAAAACCCATCGGCCACGACCTGGCCTCTTCGCGCCGGGTCAATGACGCC GTCGCGCAGTTTTTCCCGGAAAACCGCGTCTATCGCATCGACCACTATCTGGGCAAGGACACGGTACAGAACCTCATCGC TCTGCGCTTCGCCAACAGCCTGTTCGAAACCCAGTGGAACCAGAACCATATTTCGCACGTAGAGATCACGGTGGCCGAGA AGGTCGGCATCGAAGGCCGTTGGGGCTACTTCGATCAGGCCGGCCAGCTGCGTGACATGATTCAGAACCACCTGCTGCAG CTGCTCTGCCTGATTGCCATGGACCCGCCAAGCGACCTGTCGGCCGACAGTATCCGTGACGAGAAGGTCAAGGTGCTCAA GGCACTCGCACCTTTCACCCCGGAGCGTCTGGCGACCCAGGTGGTGCGTGGCCAGTACACCTCTGGCTACAGCGAAGGCA AGGCGGTGCCTGGCTATCTGGAAGAGGAAAACTCCAATACCCAGAGCGATACCGAAACCTTCGTCGCGTTGCGTGCCGAT ATCCGCAACTGGCGCTGGTCGGGTACGCCGTTCTATTTGCGCACCGGCAAACGCATGCCGCAGAAGCTGTCGCAGATCGT GATCCATTTCAAAGAGCCGCCGCACTACATCTTCGCGCCTGAACAGCGTTTGCAGATCAGCAACCGCCTGATCATCCGCC TGCAGCCTGACGAAGGCATCTCCTTGCAGGTGATGACCAAGGATCAGGGCCTTGACAAGGGCATGCAGCTGCGCAGCGGT CCCTTGCAACTGAATTTTTCCGACACCTACCGCAGCGCTCGTGTCCCCGACGCTTATGAGCGGTTGTTGCTGGAAGTCAT GCGTGGCAATCAGAACCTGTTTGTCCGCAAAGATGAGATCGAGTACGCCTGGCAATGGTGCGATCAATTGATCGCTGGCT GGAAGAAGGCGGGCGATGCGCCCAAGCCTTACCCGGCCGGAACCTGGGGGCCGATGAGCTCCATTGCCCTGATTACTCGC GACGGGAGATCCTGGTATGGCGACATGTGA
Upstream 100 bases:
>100_bases ATGCTTTCAGGCAGAATGTTGTGGTTATTACTACATATGGCCTTGAGTAACGCCTTTAAAAAAGGTATTTGTAGCCTAAC TTGATAAAAGAACCAACATT
Downstream 100 bases:
>100_bases CCTCAAGCTGCCAGCAGGGCTGGTAGCACACGATTTCGACACGGCGCAGCAACTGGCCGATGCACTGGCCGAAAAGGTCG CCGAGCGCCTGAAGCAGGCG
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MPLITVEPCTFALFGALGDLAVRKLFPALYQLDRAGLLHEDTKILALAREPGDEESHLAYIEKSMRRFIPETELEPDNLS RFLARLSYLHVDFLKAEDYVALAERVGNAETLIAYFATPASVYGAICENLASVNLAERTRAVLEKPIGHDLASSRRVNDA VAQFFPENRVYRIDHYLGKDTVQNLIALRFANSLFETQWNQNHISHVEITVAEKVGIEGRWGYFDQAGQLRDMIQNHLLQ LLCLIAMDPPSDLSADSIRDEKVKVLKALAPFTPERLATQVVRGQYTSGYSEGKAVPGYLEEENSNTQSDTETFVALRAD IRNWRWSGTPFYLRTGKRMPQKLSQIVIHFKEPPHYIFAPEQRLQISNRLIIRLQPDEGISLQVMTKDQGLDKGMQLRSG PLQLNFSDTYRSARVPDAYERLLLEVMRGNQNLFVRKDEIEYAWQWCDQLIAGWKKAGDAPKPYPAGTWGPMSSIALITR DGRSWYGDM
Sequences:
>Translated_489_residues MPLITVEPCTFALFGALGDLAVRKLFPALYQLDRAGLLHEDTKILALAREPGDEESHLAYIEKSMRRFIPETELEPDNLS RFLARLSYLHVDFLKAEDYVALAERVGNAETLIAYFATPASVYGAICENLASVNLAERTRAVLEKPIGHDLASSRRVNDA VAQFFPENRVYRIDHYLGKDTVQNLIALRFANSLFETQWNQNHISHVEITVAEKVGIEGRWGYFDQAGQLRDMIQNHLLQ LLCLIAMDPPSDLSADSIRDEKVKVLKALAPFTPERLATQVVRGQYTSGYSEGKAVPGYLEEENSNTQSDTETFVALRAD IRNWRWSGTPFYLRTGKRMPQKLSQIVIHFKEPPHYIFAPEQRLQISNRLIIRLQPDEGISLQVMTKDQGLDKGMQLRSG PLQLNFSDTYRSARVPDAYERLLLEVMRGNQNLFVRKDEIEYAWQWCDQLIAGWKKAGDAPKPYPAGTWGPMSSIALITR DGRSWYGDM >Mature_488_residues PLITVEPCTFALFGALGDLAVRKLFPALYQLDRAGLLHEDTKILALAREPGDEESHLAYIEKSMRRFIPETELEPDNLSR FLARLSYLHVDFLKAEDYVALAERVGNAETLIAYFATPASVYGAICENLASVNLAERTRAVLEKPIGHDLASSRRVNDAV AQFFPENRVYRIDHYLGKDTVQNLIALRFANSLFETQWNQNHISHVEITVAEKVGIEGRWGYFDQAGQLRDMIQNHLLQL LCLIAMDPPSDLSADSIRDEKVKVLKALAPFTPERLATQVVRGQYTSGYSEGKAVPGYLEEENSNTQSDTETFVALRADI RNWRWSGTPFYLRTGKRMPQKLSQIVIHFKEPPHYIFAPEQRLQISNRLIIRLQPDEGISLQVMTKDQGLDKGMQLRSGP LQLNFSDTYRSARVPDAYERLLLEVMRGNQNLFVRKDEIEYAWQWCDQLIAGWKKAGDAPKPYPAGTWGPMSSIALITRD GRSWYGDM
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=485, Percent_Identity=38.5567010309278, Blast_Score=323, Evalue=3e-88, Organism=Homo sapiens, GI108773793, Length=485, Percent_Identity=38.5567010309278, Blast_Score=322, Evalue=4e-88, Organism=Homo sapiens, GI52145310, Length=496, Percent_Identity=29.8387096774194, Blast_Score=171, Evalue=1e-42, Organism=Escherichia coli, GI1788158, Length=485, Percent_Identity=54.4329896907216, Blast_Score=545, Evalue=1e-156, Organism=Caenorhabditis elegans, GI17538218, Length=494, Percent_Identity=36.6396761133603, Blast_Score=311, Evalue=4e-85, Organism=Saccharomyces cerevisiae, GI6324088, Length=475, Percent_Identity=35.5789473684211, Blast_Score=293, Evalue=6e-80, Organism=Drosophila melanogaster, GI24643350, Length=477, Percent_Identity=35.6394129979036, Blast_Score=286, Evalue=3e-77, Organism=Drosophila melanogaster, GI24643352, Length=477, Percent_Identity=35.6394129979036, Blast_Score=285, Evalue=4e-77, Organism=Drosophila melanogaster, GI221513548, Length=502, Percent_Identity=30.6772908366534, Blast_Score=206, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 55582; Mature: 55451
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLITVEPCTFALFGALGDLAVRKLFPALYQLDRAGLLHEDTKILALAREPGDEESHLAY CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHH IEKSMRRFIPETELEPDNLSRFLARLSYLHVDFLKAEDYVALAERVGNAETLIAYFATPA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHEEEEECCCHH SVYGAICENLASVNLAERTRAVLEKPIGHDLASSRRVNDAVAQFFPENRVYRIDHYLGKD HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCEEEEHHHCCHH TVQNLIALRFANSLFETQWNQNHISHVEITVAEKVGIEGRWGYFDQAGQLRDMIQNHLLQ HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHH LLCLIAMDPPSDLSADSIRDEKVKVLKALAPFTPERLATQVVRGQYTSGYSEGKAVPGYL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC EEENSNTQSDTETFVALRADIRNWRWSGTPFYLRTGKRMPQKLSQIVIHFKEPPHYIFAP CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHEEECCCCCEEECC EQRLQISNRLIIRLQPDEGISLQVMTKDQGLDKGMQLRSGPLQLNFSDTYRSARVPDAYE HHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCCCHHHH RLLLEVMRGNQNLFVRKDEIEYAWQWCDQLIAGWKKAGDAPKPYPAGTWGPMSSIALITR HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE DGRSWYGDM CCCCCCCCC >Mature Secondary Structure PLITVEPCTFALFGALGDLAVRKLFPALYQLDRAGLLHEDTKILALAREPGDEESHLAY CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHH IEKSMRRFIPETELEPDNLSRFLARLSYLHVDFLKAEDYVALAERVGNAETLIAYFATPA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHEEEEECCCHH SVYGAICENLASVNLAERTRAVLEKPIGHDLASSRRVNDAVAQFFPENRVYRIDHYLGKD HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCEEEEHHHCCHH TVQNLIALRFANSLFETQWNQNHISHVEITVAEKVGIEGRWGYFDQAGQLRDMIQNHLLQ HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHH LLCLIAMDPPSDLSADSIRDEKVKVLKALAPFTPERLATQVVRGQYTSGYSEGKAVPGYL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC EEENSNTQSDTETFVALRADIRNWRWSGTPFYLRTGKRMPQKLSQIVIHFKEPPHYIFAP CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHEEECCCCCEEECC EQRLQISNRLIIRLQPDEGISLQVMTKDQGLDKGMQLRSGPLQLNFSDTYRSARVPDAYE HHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHCCCCCCHHHH RLLLEVMRGNQNLFVRKDEIEYAWQWCDQLIAGWKKAGDAPKPYPAGTWGPMSSIALITR HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE DGRSWYGDM CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537370; 10984043 [H]