| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pgl [H]
Identifier: 66044372
GI number: 66044372
Start: 1270698
End: 1271411
Strand: Direct
Name: pgl [H]
Synonym: Psyr_1121
Alternate gene names: 66044372
Gene position: 1270698-1271411 (Clockwise)
Preceding gene: 66044371
Following gene: 66044373
Centisome position: 20.85
GC content: 65.13
Gene sequence:
>714_bases ATGGCGACATGTGACCTCAAGCTGCCAGCAGGGCTGGTAGCACACGATTTCGACACGGCGCAGCAACTGGCCGATGCACT GGCCGAAAAGGTCGCCGAGCGCCTGAAGCAGGCGATCAGCGAGAACGGTCTGGCGACGCTGGTGGTGTCCGGTGGACGCA GCCCGGTCGCCTTCTTCCAGAGTCTGGCGACACAACCGCTGGAGTGGTCGAAGGTCGTCATCAGTCTGGCGGACGAGCGC TTCGTGCCGACCGAACATGCCGACAGCAATGCCGGCCTGCTGCAGCGCCACTTGCTGCAGGGGCCTGTGGCGAAGGCCAG GTTTCTCGGCCTGTACAGCGTTGCGAGCAGTGTCGAGGAAGCCGCGCAGGCTGCCGATCAGGCCTTGGCCGAGCTGCCAC CCATAGATGTACTGATTCTGGGCATGGGCGACGACGGGCATACCGCATCGCTATTCCCCAACAGCCCGAATCTGAGCGAA GCCCTTGATCTGCAAGGCGAGCGCCGCTGCCTGCCCATGCTCGCACCGAGCGTGCCGCACCAGCGCCTGACCCTGACCCG CCGCCTGCTGGCGTCGGCGCGCTCACCGATTCTGTCGGTGTCCGGTCAGGCCAAGCTCGACACCCTGCGCGCCGCGCTGG CAGGCGATGACCTCGCCGAAATGCCGGTGCGTGCCTTTCTCAACCCGTCTCTCGAGATTTACTGGTGCCCATAA
Upstream 100 bases:
>100_bases GGCTGGAAGAAGGCGGGCGATGCGCCCAAGCCTTACCCGGCCGGAACCTGGGGGCCGATGAGCTCCATTGCCCTGATTAC TCGCGACGGGAGATCCTGGT
Downstream 100 bases:
>100_bases GCCCCGATAAGCCCCACAAACAAAGGAACCGTCGCCATGACACAGAACGAAAATAATCAGCCGCTGACCAGCATGGCGAA CAAGATTGCCCAGATCGACG
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MATCDLKLPAGLVAHDFDTAQQLADALAEKVAERLKQAISENGLATLVVSGGRSPVAFFQSLATQPLEWSKVVISLADER FVPTEHADSNAGLLQRHLLQGPVAKARFLGLYSVASSVEEAAQAADQALAELPPIDVLILGMGDDGHTASLFPNSPNLSE ALDLQGERRCLPMLAPSVPHQRLTLTRRLLASARSPILSVSGQAKLDTLRAALAGDDLAEMPVRAFLNPSLEIYWCP
Sequences:
>Translated_237_residues MATCDLKLPAGLVAHDFDTAQQLADALAEKVAERLKQAISENGLATLVVSGGRSPVAFFQSLATQPLEWSKVVISLADER FVPTEHADSNAGLLQRHLLQGPVAKARFLGLYSVASSVEEAAQAADQALAELPPIDVLILGMGDDGHTASLFPNSPNLSE ALDLQGERRCLPMLAPSVPHQRLTLTRRLLASARSPILSVSGQAKLDTLRAALAGDDLAEMPVRAFLNPSLEIYWCP >Mature_236_residues ATCDLKLPAGLVAHDFDTAQQLADALAEKVAERLKQAISENGLATLVVSGGRSPVAFFQSLATQPLEWSKVVISLADERF VPTEHADSNAGLLQRHLLQGPVAKARFLGLYSVASSVEEAAQAADQALAELPPIDVLILGMGDDGHTASLFPNSPNLSEA LDLQGERRCLPMLAPSVPHQRLTLTRRLLASARSPILSVSGQAKLDTLRAALAGDDLAEMPVRAFLNPSLEIYWCP
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=228, Percent_Identity=32.8947368421053, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI6912586, Length=224, Percent_Identity=32.5892857142857, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI115533058, Length=205, Percent_Identity=27.8048780487805, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI115533060, Length=205, Percent_Identity=27.8048780487805, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6321687, Length=209, Percent_Identity=29.1866028708134, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321957, Length=204, Percent_Identity=27.9411764705882, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24641119, Length=216, Percent_Identity=28.2407407407407, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25278; Mature: 25147
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATCDLKLPAGLVAHDFDTAQQLADALAEKVAERLKQAISENGLATLVVSGGRSPVAFFQ CCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH SLATQPLEWSKVVISLADERFVPTEHADSNAGLLQRHLLQGPVAKARFLGLYSVASSVEE HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AAQAADQALAELPPIDVLILGMGDDGHTASLFPNSPNLSEALDLQGERRCLPMLAPSVPH HHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCHHHHHCCCCCCCCHHHHCCCCCH QRLTLTRRLLASARSPILSVSGQAKLDTLRAALAGDDLAEMPVRAFLNPSLEIYWCP HHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure ATCDLKLPAGLVAHDFDTAQQLADALAEKVAERLKQAISENGLATLVVSGGRSPVAFFQ CCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHH SLATQPLEWSKVVISLADERFVPTEHADSNAGLLQRHLLQGPVAKARFLGLYSVASSVEE HHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AAQAADQALAELPPIDVLILGMGDDGHTASLFPNSPNLSEALDLQGERRCLPMLAPSVPH HHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCCHHHHHCCCCCCCCHHHHCCCCCH QRLTLTRRLLASARSPILSVSGQAKLDTLRAALAGDDLAEMPVRAFLNPSLEIYWCP HHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA