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The map label for this gene is ytfH [C]

Identifier: 66044331

GI number: 66044331

Start: 1221539

End: 1221982

Strand: Direct

Name: ytfH [C]

Synonym: Psyr_1078

Alternate gene names: 66044331

Gene position: 1221539-1221982 (Clockwise)

Preceding gene: 66044329

Following gene: 66044332

Centisome position: 20.05

GC content: 59.01

Gene sequence:

>444_bases
ATGCCTGTCGACATACAAAAAGTAGGCACATCGGTGATACCGGGCGGGCTGGACGCGCAGGAAGTGGTCAGACGCTCCGA
AGCGGCCTGTGCTGCGCTCAGCGATGATGAGGATGGTCTCAAGCGTGACATTCTCGGCCACGCCGGTAATCGCTGGTCAT
TGGGCGTGGTCCATGCCCTTGGCGTCAGCAGCCCTTTGCGCCACGCCCAATTGCGCCGAAAACTGCACGGTGTCACTCAG
CGCATGCTCACTCATACCTTGCGCCAGCTCGAACAGGACGGGTTGATCACCCGCCACGACTACCGCGAGAAGCCGCTCAG
GGTGGAATATTCGTTGACCGACCTGGGCATGGGGCTGCTGGTACAGATGATTCCGCTGTGGACTTGGGTGATTGAAAATT
CGGAGGCGTTCAGTGCGGCGCGAAATCGTTATCTGGACAGGTAA

Upstream 100 bases:

>100_bases
CTGCACCTATTACCAGAATGCGTTGTTTGACGTTTGCGTTATCGGCTTGCATGGTGATCCCTTTGAATAGCCTTTCAATT
CAGGCGGGAGAGATGCTGGC

Downstream 100 bases:

>100_bases
ACGTGATGGCTGATGCGCCATCAACCCCTCGCCATTTTCTTCGGCGCCGCTTATCGTGCACGAATAATTCGCCAAGGGAT
GTGCACGCATGAACTACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MPVDIQKVGTSVIPGGLDAQEVVRRSEAACAALSDDEDGLKRDILGHAGNRWSLGVVHALGVSSPLRHAQLRRKLHGVTQ
RMLTHTLRQLEQDGLITRHDYREKPLRVEYSLTDLGMGLLVQMIPLWTWVIENSEAFSAARNRYLDR

Sequences:

>Translated_147_residues
MPVDIQKVGTSVIPGGLDAQEVVRRSEAACAALSDDEDGLKRDILGHAGNRWSLGVVHALGVSSPLRHAQLRRKLHGVTQ
RMLTHTLRQLEQDGLITRHDYREKPLRVEYSLTDLGMGLLVQMIPLWTWVIENSEAFSAARNRYLDR
>Mature_146_residues
PVDIQKVGTSVIPGGLDAQEVVRRSEAACAALSDDEDGLKRDILGHAGNRWSLGVVHALGVSSPLRHAQLRRKLHGVTQR
MLTHTLRQLEQDGLITRHDYREKPLRVEYSLTDLGMGLLVQMIPLWTWVIENSEAFSAARNRYLDR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=106, Percent_Identity=36.7924528301887, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16518; Mature: 16387

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVDIQKVGTSVIPGGLDAQEVVRRSEAACAALSDDEDGLKRDILGHAGNRWSLGVVHAL
CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
GVSSPLRHAQLRRKLHGVTQRMLTHTLRQLEQDGLITRHDYREKPLRVEYSLTDLGMGLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHH
VQMIPLWTWVIENSEAFSAARNRYLDR
HHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
PVDIQKVGTSVIPGGLDAQEVVRRSEAACAALSDDEDGLKRDILGHAGNRWSLGVVHAL
CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
GVSSPLRHAQLRRKLHGVTQRMLTHTLRQLEQDGLITRHDYREKPLRVEYSLTDLGMGLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHH
VQMIPLWTWVIENSEAFSAARNRYLDR
HHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]