| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yeaN [H]
Identifier: 66044329
GI number: 66044329
Start: 1219265
End: 1220509
Strand: Direct
Name: yeaN [H]
Synonym: Psyr_1076
Alternate gene names: 66044329
Gene position: 1219265-1220509 (Clockwise)
Preceding gene: 66044328
Following gene: 66044331
Centisome position: 20.01
GC content: 65.14
Gene sequence:
>1245_bases ATGACCGAGAAACTGATGACTGCCAAGGCTCAACTCAGCCCCCAACCGACTGCCGATCAACCTCATTCTGCCTTGAAGCG CCCCTGGCTGTTGCTGCTGGGTCTGGTGCTGGTCGCCCTCAACCTGCGCCCGGCGTTGTCCAGCATTGCGCCGCTGCTTG ACACGGTGTCCGACAGCCTGGGCATGTCCGCTGCCGAGGCCGGACTGCTGACCACCTTGCCGGTTTTGTGCCTGGGCCTG TTCGCGCCGCTCGCACCGATCCTCGCCCGCCGGTTTGGCAGTGAGCGGGTGGTCATGGTGGTGCTTCTGACACTGGCTGC AGGCTTGGCAGTGCGCAGTCTGTTTGGTCAGGTCGGGCTGTTTGGCGGCAGCCTGCTGGCGGGTGCGAGCATCGGAATCA TCGGCGTGTTGCTGCCGGGTATCGTCAAACGTGATTTTCCGCACAAGGCCGGAGCCATGACCGGTGTCTACACCATGGCC TTGTGCCTGGGCGCGGCCATTGCAGCCGGTTCGACGGTGCCGCTCAGTCAGTACGTGGGTGGCAGTTGGCAGATTGGCCT GGGTTTCTGGCTGGTTCCGGCACTGATTGCCGCCGCGTTCTGGTTTCCGCAGGCGCGTGAAGTGCATGGCACGCATCGCG ATGTTTACCGGGTCCGCGGCTTGTTGCGTGACCCGCTGGCCTGGCAGGTCACGCTGTACATGGGCCTGCAATCGTCGCTG TCGTACATCGTCTTCGGCTGGTTGCCGTCGATCCTCATCGGTCGCGGCCTGACGCCCACCCAGGCCGGCCTGCTGTTGTC CGGCTCGATCATTGCGCAGGTCATCAGCGCGCTGGCGGTGCCTTATCTGGCCACACGCGGCAAGGATCAGCGTCTGGCGA TCATGCTGGTCATGTCGCTGACCCTGATCGGTCTGTTCGGCTGCCTGTATGCGCCGCTTGGCGGGCTGTGGGGCTGGGCG ATCCTGCTGGGGATCGGGCAGGGCGGCACGTTCAGTCTGGCGCTGGCCTTGATCGTCCTGCGCTCGCGCGACTCACATGT CGCCGCCAACCTGTCGAGCATGGCGCAAGGCGTCGGCTACACCATCGCCTCGACCGGCCCGTTTGCCGTGGGCGTGGTGC ATGACATGACCGGCAGCTGGAGCGCGATTGGCTGGATCTTCGCGGTACTCGGGCTGGGCGCCATCATCGCGGGCATGGGC GCCGGTCGGGCGCTGCAGGTGCAGGTCAGTAGCGAGAAGGTTTGA
Upstream 100 bases:
>100_bases CTGTCGTTGCTGTGTGGGTTGTATGCAATTGATCTGAACCTTGTATTCGCGATGATTCTCCAACAGGATACCGCCCCCCT GAAAAGGGTCGACATACTTG
Downstream 100 bases:
>100_bases TGTTCGATGATTGATGATCGTGCGACCCGGGCTTGAGTTGCTTCAGGTCTGGGTCAGATTGGCCCGTGCCCATTGTTCGG CACGGGTGACGCTCAGCCCT
Product: cyanate transport system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTEKLMTAKAQLSPQPTADQPHSALKRPWLLLLGLVLVALNLRPALSSIAPLLDTVSDSLGMSAAEAGLLTTLPVLCLGL FAPLAPILARRFGSERVVMVVLLTLAAGLAVRSLFGQVGLFGGSLLAGASIGIIGVLLPGIVKRDFPHKAGAMTGVYTMA LCLGAAIAAGSTVPLSQYVGGSWQIGLGFWLVPALIAAAFWFPQAREVHGTHRDVYRVRGLLRDPLAWQVTLYMGLQSSL SYIVFGWLPSILIGRGLTPTQAGLLLSGSIIAQVISALAVPYLATRGKDQRLAIMLVMSLTLIGLFGCLYAPLGGLWGWA ILLGIGQGGTFSLALALIVLRSRDSHVAANLSSMAQGVGYTIASTGPFAVGVVHDMTGSWSAIGWIFAVLGLGAIIAGMG AGRALQVQVSSEKV
Sequences:
>Translated_414_residues MTEKLMTAKAQLSPQPTADQPHSALKRPWLLLLGLVLVALNLRPALSSIAPLLDTVSDSLGMSAAEAGLLTTLPVLCLGL FAPLAPILARRFGSERVVMVVLLTLAAGLAVRSLFGQVGLFGGSLLAGASIGIIGVLLPGIVKRDFPHKAGAMTGVYTMA LCLGAAIAAGSTVPLSQYVGGSWQIGLGFWLVPALIAAAFWFPQAREVHGTHRDVYRVRGLLRDPLAWQVTLYMGLQSSL SYIVFGWLPSILIGRGLTPTQAGLLLSGSIIAQVISALAVPYLATRGKDQRLAIMLVMSLTLIGLFGCLYAPLGGLWGWA ILLGIGQGGTFSLALALIVLRSRDSHVAANLSSMAQGVGYTIASTGPFAVGVVHDMTGSWSAIGWIFAVLGLGAIIAGMG AGRALQVQVSSEKV >Mature_413_residues TEKLMTAKAQLSPQPTADQPHSALKRPWLLLLGLVLVALNLRPALSSIAPLLDTVSDSLGMSAAEAGLLTTLPVLCLGLF APLAPILARRFGSERVVMVVLLTLAAGLAVRSLFGQVGLFGGSLLAGASIGIIGVLLPGIVKRDFPHKAGAMTGVYTMAL CLGAAIAAGSTVPLSQYVGGSWQIGLGFWLVPALIAAAFWFPQAREVHGTHRDVYRVRGLLRDPLAWQVTLYMGLQSSLS YIVFGWLPSILIGRGLTPTQAGLLLSGSIIAQVISALAVPYLATRGKDQRLAIMLVMSLTLIGLFGCLYAPLGGLWGWAI LLGIGQGGTFSLALALIVLRSRDSHVAANLSSMAQGVGYTIASTGPFAVGVVHDMTGSWSAIGWIFAVLGLGAIIAGMGA GRALQVQVSSEKV
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=386, Percent_Identity=39.3782383419689, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI1786536, Length=362, Percent_Identity=33.9779005524862, Blast_Score=150, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43065; Mature: 42934
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKLMTAKAQLSPQPTADQPHSALKRPWLLLLGLVLVALNLRPALSSIAPLLDTVSDSL CCCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GMSAAEAGLLTTLPVLCLGLFAPLAPILARRFGSERVVMVVLLTLAAGLAVRSLFGQVGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGGSLLAGASIGIIGVLLPGIVKRDFPHKAGAMTGVYTMALCLGAAIAAGSTVPLSQYVG CCCHHHHCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHCC GSWQIGLGFWLVPALIAAAFWFPQAREVHGTHRDVYRVRGLLRDPLAWQVTLYMGLQSSL CCEEEHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHH SYIVFGWLPSILIGRGLTPTQAGLLLSGSIIAQVISALAVPYLATRGKDQRLAIMLVMSL HHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TLIGLFGCLYAPLGGLWGWAILLGIGQGGTFSLALALIVLRSRDSHVAANLSSMAQGVGY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCE TIASTGPFAVGVVHDMTGSWSAIGWIFAVLGLGAIIAGMGAGRALQVQVSSEKV EEECCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure TEKLMTAKAQLSPQPTADQPHSALKRPWLLLLGLVLVALNLRPALSSIAPLLDTVSDSL CCHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH GMSAAEAGLLTTLPVLCLGLFAPLAPILARRFGSERVVMVVLLTLAAGLAVRSLFGQVGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGGSLLAGASIGIIGVLLPGIVKRDFPHKAGAMTGVYTMALCLGAAIAAGSTVPLSQYVG CCCHHHHCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHCC GSWQIGLGFWLVPALIAAAFWFPQAREVHGTHRDVYRVRGLLRDPLAWQVTLYMGLQSSL CCEEEHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHH SYIVFGWLPSILIGRGLTPTQAGLLLSGSIIAQVISALAVPYLATRGKDQRLAIMLVMSL HHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH TLIGLFGCLYAPLGGLWGWAILLGIGQGGTFSLALALIVLRSRDSHVAANLSSMAQGVGY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCE TIASTGPFAVGVVHDMTGSWSAIGWIFAVLGLGAIIAGMGAGRALQVQVSSEKV EEECCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]