| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is folE [H]
Identifier: 66044273
GI number: 66044273
Start: 1151982
End: 1152545
Strand: Reverse
Name: folE [H]
Synonym: Psyr_1020
Alternate gene names: 66044273
Gene position: 1152545-1151982 (Counterclockwise)
Preceding gene: 66044274
Following gene: 66044272
Centisome position: 18.91
GC content: 56.03
Gene sequence:
>564_bases ATGAGTTCGTCCCTGCCCCAGCACTATCGAGACATTCTGCTCGGCCTTGGTGAAGATCCAGACCGCGAAGGTCTGCTGGA CACGCCGAAACGCGCTTCCAAAGCCATGCAGTACCTGTGTCATGGCTACACCCAGAGCGTCGAAGAAATCGTCAATGGCG CGCTGTTCGCCTCCGATAACGATGAGATGGTCATCGTCCAGAACATCGAGTTGTACTCGCTTTGCGAGCACCACCTGCTG CCGTTCATAGGCAAGGCGCATGTCGCCTACATTCCGACCGGCAAGGTGCTGGGTCTGTCGAAGATCGCACGCATCGTCGA CATGTTTGCCCGCCGTCTGCAGATTCAGGAAAATCTGACCAAACAGATTGCCGATGCGATTCAGAAAGTCACCGGAGCCG CCGGTGTAGCGGTGGTCATCGAAGCCCAGCACATGTGCATGATGATGCGCGGCGTCGAAAAGCAGAATTCGACCATGAAT ACGTCAGTGATGCTCGGCGCCTTCCGTGACTCGAGCACCACGCGCATGGAGTTTCTGCAATTGATCGGACGGAGCAGACA ATAA
Upstream 100 bases:
>100_bases GAGCCTGCGTTATCTTCTGGACAGCACCTATGTCACCGGCACAACACTGACCGTAAACGGCGGACGGCACGTCAAGTAAG CCGCCCCGAGGATCATTCTG
Downstream 100 bases:
>100_bases TGGCAAGACTCGAACCTGGCACCGCACGCATCCGCGTCAAGGACCTGCGCCTGCGCACGTTCATCGGCATCAACGAGGAC GAAATCCTCAACAAACAGGA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I 1; GTP-CH-I 1 [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSSSLPQHYRDILLGLGEDPDREGLLDTPKRASKAMQYLCHGYTQSVEEIVNGALFASDNDEMVIVQNIELYSLCEHHLL PFIGKAHVAYIPTGKVLGLSKIARIVDMFARRLQIQENLTKQIADAIQKVTGAAGVAVVIEAQHMCMMMRGVEKQNSTMN TSVMLGAFRDSSTTRMEFLQLIGRSRQ
Sequences:
>Translated_187_residues MSSSLPQHYRDILLGLGEDPDREGLLDTPKRASKAMQYLCHGYTQSVEEIVNGALFASDNDEMVIVQNIELYSLCEHHLL PFIGKAHVAYIPTGKVLGLSKIARIVDMFARRLQIQENLTKQIADAIQKVTGAAGVAVVIEAQHMCMMMRGVEKQNSTMN TSVMLGAFRDSSTTRMEFLQLIGRSRQ >Mature_186_residues SSSLPQHYRDILLGLGEDPDREGLLDTPKRASKAMQYLCHGYTQSVEEIVNGALFASDNDEMVIVQNIELYSLCEHHLLP FIGKAHVAYIPTGKVLGLSKIARIVDMFARRLQIQENLTKQIADAIQKVTGAAGVAVVIEAQHMCMMMRGVEKQNSTMNT SVMLGAFRDSSTTRMEFLQLIGRSRQ
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=174, Percent_Identity=57.4712643678161, Blast_Score=225, Evalue=2e-59, Organism=Homo sapiens, GI4503949, Length=174, Percent_Identity=57.4712643678161, Blast_Score=225, Evalue=2e-59, Organism=Homo sapiens, GI66932970, Length=144, Percent_Identity=52.7777777777778, Blast_Score=173, Evalue=6e-44, Organism=Homo sapiens, GI66932972, Length=134, Percent_Identity=55.9701492537313, Blast_Score=173, Evalue=7e-44, Organism=Escherichia coli, GI1788476, Length=186, Percent_Identity=40.8602150537634, Blast_Score=120, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17560486, Length=181, Percent_Identity=58.5635359116022, Blast_Score=228, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6321706, Length=176, Percent_Identity=57.9545454545455, Blast_Score=213, Evalue=1e-56, Organism=Drosophila melanogaster, GI24656791, Length=175, Percent_Identity=60, Blast_Score=218, Evalue=2e-57, Organism=Drosophila melanogaster, GI24656782, Length=174, Percent_Identity=60.3448275862069, Blast_Score=218, Evalue=2e-57, Organism=Drosophila melanogaster, GI24656796, Length=175, Percent_Identity=60, Blast_Score=218, Evalue=3e-57,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 20812; Mature: 20681
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLPQHYRDILLGLGEDPDREGLLDTPKRASKAMQYLCHGYTQSVEEIVNGALFASDN CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC DEMVIVQNIELYSLCEHHLLPFIGKAHVAYIPTGKVLGLSKIARIVDMFARRLQIQENLT CCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH KQIADAIQKVTGAAGVAVVIEAQHMCMMMRGVEKQNSTMNTSVMLGAFRDSSTTRMEFLQ HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCHHHHHHHH LIGRSRQ HHCCCCC >Mature Secondary Structure SSSLPQHYRDILLGLGEDPDREGLLDTPKRASKAMQYLCHGYTQSVEEIVNGALFASDN CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC DEMVIVQNIELYSLCEHHLLPFIGKAHVAYIPTGKVLGLSKIARIVDMFARRLQIQENLT CCEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH KQIADAIQKVTGAAGVAVVIEAQHMCMMMRGVEKQNSTMNTSVMLGAFRDSSTTRMEFLQ HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCHHHHHHHH LIGRSRQ HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]