| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044224
Identifier: 66044224
GI number: 66044224
Start: 1104451
End: 1104954
Strand: Direct
Name: 66044224
Synonym: Psyr_0971
Alternate gene names: NA
Gene position: 1104451-1104954 (Clockwise)
Preceding gene: 66044223
Following gene: 66044225
Centisome position: 18.12
GC content: 60.32
Gene sequence:
>504_bases ATGAAGCTACTGATTCCCGGCGCCGTGGCGTTGGTGCTGTTGTCTGGTCTGGCCGTTGCCGCACCTGCTGCGCCGGTATC GGCCAGCCCCATGCACGATCAATACCTGCCGCCTGACGACCTGAGCCTGCGCGATGGTGTGCCCGAGCAGCAACAGTTGA TGCGGGTCACCGAGTACACCATCGTTGCCGGTAACCAGCGGCAATCGAGTCAGCAGCCGATTCCGGTCACCTCGCCCTTG TCGCTGCGCCTCAAGGGCAAGTCGCTGAACAAGGGCGCATCCATCTCCCAGGTGCTCGTGCACTTCGATGGCGGTGATAG CAAAAGCCTTAAAAAGCCGACCTATGATGAGCCGTCGCGCACGTTGACGCTGTATTACCCGCTGTCCCAGTACCGCGTGC TGGTGGACTTGCTGCGCAACGAGAAGGTCTATTGCCAGTTCCTCAGTTATGCCAACGGACACATCTGGGCTGATCTGCAC ACCACCTCTGCACGTGCGCGTTGA
Upstream 100 bases:
>100_bases TGCTGCCGGTATCTATGCGGTCAAAGGGATGTAAGGCATTCTGACGACCGCTTCTGCGAACAGGGGCGGTCGTCGATTGG CAATTATATGGAAACCCTCA
Downstream 100 bases:
>100_bases GCGCGGCGCTCGCCGGAGGGTAAACTGCCCGCCCGTGAAAGTGTCTGCGACCTGCTGGAGCCTGTAATGCGTAAAGATAA GAAGCAGTTGATTGGCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MKLLIPGAVALVLLSGLAVAAPAAPVSASPMHDQYLPPDDLSLRDGVPEQQQLMRVTEYTIVAGNQRQSSQQPIPVTSPL SLRLKGKSLNKGASISQVLVHFDGGDSKSLKKPTYDEPSRTLTLYYPLSQYRVLVDLLRNEKVYCQFLSYANGHIWADLH TTSARAR
Sequences:
>Translated_167_residues MKLLIPGAVALVLLSGLAVAAPAAPVSASPMHDQYLPPDDLSLRDGVPEQQQLMRVTEYTIVAGNQRQSSQQPIPVTSPL SLRLKGKSLNKGASISQVLVHFDGGDSKSLKKPTYDEPSRTLTLYYPLSQYRVLVDLLRNEKVYCQFLSYANGHIWADLH TTSARAR >Mature_167_residues MKLLIPGAVALVLLSGLAVAAPAAPVSASPMHDQYLPPDDLSLRDGVPEQQQLMRVTEYTIVAGNQRQSSQQPIPVTSPL SLRLKGKSLNKGASISQVLVHFDGGDSKSLKKPTYDEPSRTLTLYYPLSQYRVLVDLLRNEKVYCQFLSYANGHIWADLH TTSARAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18329; Mature: 18329
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLIPGAVALVLLSGLAVAAPAAPVSASPMHDQYLPPDDLSLRDGVPEQQQLMRVTEYT CEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEE IVAGNQRQSSQQPIPVTSPLSLRLKGKSLNKGASISQVLVHFDGGDSKSLKKPTYDEPSR EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC TLTLYYPLSQYRVLVDLLRNEKVYCQFLSYANGHIWADLHTTSARAR EEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure MKLLIPGAVALVLLSGLAVAAPAAPVSASPMHDQYLPPDDLSLRDGVPEQQQLMRVTEYT CEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEE IVAGNQRQSSQQPIPVTSPLSLRLKGKSLNKGASISQVLVHFDGGDSKSLKKPTYDEPSR EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC TLTLYYPLSQYRVLVDLLRNEKVYCQFLSYANGHIWADLHTTSARAR EEEEEECHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA