| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fecB [H]
Identifier: 66043934
GI number: 66043934
Start: 755559
End: 756479
Strand: Reverse
Name: fecB [H]
Synonym: Psyr_0667
Alternate gene names: 66043934
Gene position: 756479-755559 (Counterclockwise)
Preceding gene: 66043936
Following gene: 161486738
Centisome position: 12.41
GC content: 64.6
Gene sequence:
>921_bases ATGCGTGCTTTTCGACTTCCGCATCTGCTGGCTTGCGGCCTGCTGACCCTGATCGCGAGCGTCGCCCAGGCCGCGCCTAT CGACATCGATGACGGCCAACACAAAGTCCACCTGCCTGATACCCCCAAGCGCGTGGTGGTGCTGGAGTTTTCGTTTCTCG ACGGGCTGGCCTCGGTCGGCGTGACACCCGTCGGCGCGGCGGACGATGGCGATGCCAACCGCGTGCTGCCCAAGGTGCGC AAGGCCGTCGGCGAATGGCAGTCTGTAGGTCTGCGTTCGCAACCCAATATAGAGGTGATCGCGCGGCTCAAGCCGGACCT GATCATTGCCGACCTCGGTCGCCATCAGGCGCTGTACAACGACCTGGCCAGCCTGGCGCCGACGCTGATGCTGCCGTCAC GCGGTGAGGATTATCAGGGCAGCCTGAAGTCTGCCGAGCTGATCGGCGTCGCGCTGGGCAAAGGGCCACAGATGCAGGCG CGCATCGCGGAAAACCGCCAGCACCTGAAGACCGTCGCCGAGCAGATTCCGGCCAACAGCAACGTGCTGTTCGGCGTCGC CCGCGAAGACAGCTTCTCTGTGCATGGCCCGCACTCTTATGCCGGCAGCGTGTTGCAGGCGATTGGTCTGAAGGTCCCGG AAGTACGCAAAAACGCCGCGCCAACCGAATTCGTCAGCCTGGAGCAACTGCTGGCCCTGGACCCGGGCTGGTTGCTGGTC GGTCATTACCGCCGTCCGAGCATCGTTGACAGCTGGAGCAAGCAGCCGCTGTGGCAGGTGCTGGGCGCGGTGCGTAACAA GCAGGTGGCCGAAGTGGATGGCGACAGCTGGGCGCGCAATCGCGGGATCATGGCCTCCGAGCAGATCGCCGACGATGCGC TTGCCGTGCTCAAGGGCGGCAAGGCCGTGCTGAACCCGTAA
Upstream 100 bases:
>100_bases AGTGCCCGCCGTTTTCAACAAGAGTGCCCGCCGTTTTCTTCGCGGCCTTCAGGGCGCGCCTGTTTTTCATGATTCCGCTT TGTTAGAAAGGACCTTTGCC
Downstream 100 bases:
>100_bases ATGCGCCGCTGGCTGATGGCGGGCGTGATCATCGCGGCCTGCCTGGGATTGTTCTGGGTGTCGCTGTTTGCCCTGTCGTC GTTCAGCATTCGCCAGGTGG
Product: iron-dicitrate transporter substrate-binding subunit
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: Iron(III) dicitrate-binding periplasmic protein [H]
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVGVTPVGAADDGDANRVLPKVR KAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYNDLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQA RIAENRQHLKTVAEQIPANSNVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGGKAVLNP
Sequences:
>Translated_306_residues MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVGVTPVGAADDGDANRVLPKVR KAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYNDLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQA RIAENRQHLKTVAEQIPANSNVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGGKAVLNP >Mature_306_residues MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVGVTPVGAADDGDANRVLPKVR KAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYNDLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQA RIAENRQHLKTVAEQIPANSNVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGGKAVLNP
Specific function: Binds citrate-dependent Fe(3+); part of the binding- protein-dependent transport system for uptake of citrate-dependent Fe(3+) [H]
COG id: COG4594
COG function: function code P; ABC-type Fe3+-citrate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87082411, Length=290, Percent_Identity=48.2758620689655, Blast_Score=270, Evalue=7e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 32909; Mature: 32909
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCC VTPVGAADDGDANRVLPKVRKAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCHHHHHHHH DLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQARIAENRQHLKTVAEQIPANS HHHHHHHEEECCCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC NVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV CEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEE GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGG ECCCCCCHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHCCC KAVLNP CCCCCC >Mature Secondary Structure MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCC VTPVGAADDGDANRVLPKVRKAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYN CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCHHHHHHHH DLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQARIAENRQHLKTVAEQIPANS HHHHHHHEEECCCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC NVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV CEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEE GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGG ECCCCCCHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHCCC KAVLNP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2651410; 7610040; 9278503 [H]