Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

Click here to switch to the map view.

The map label for this gene is fecB [H]

Identifier: 66043934

GI number: 66043934

Start: 755559

End: 756479

Strand: Reverse

Name: fecB [H]

Synonym: Psyr_0667

Alternate gene names: 66043934

Gene position: 756479-755559 (Counterclockwise)

Preceding gene: 66043936

Following gene: 161486738

Centisome position: 12.41

GC content: 64.6

Gene sequence:

>921_bases
ATGCGTGCTTTTCGACTTCCGCATCTGCTGGCTTGCGGCCTGCTGACCCTGATCGCGAGCGTCGCCCAGGCCGCGCCTAT
CGACATCGATGACGGCCAACACAAAGTCCACCTGCCTGATACCCCCAAGCGCGTGGTGGTGCTGGAGTTTTCGTTTCTCG
ACGGGCTGGCCTCGGTCGGCGTGACACCCGTCGGCGCGGCGGACGATGGCGATGCCAACCGCGTGCTGCCCAAGGTGCGC
AAGGCCGTCGGCGAATGGCAGTCTGTAGGTCTGCGTTCGCAACCCAATATAGAGGTGATCGCGCGGCTCAAGCCGGACCT
GATCATTGCCGACCTCGGTCGCCATCAGGCGCTGTACAACGACCTGGCCAGCCTGGCGCCGACGCTGATGCTGCCGTCAC
GCGGTGAGGATTATCAGGGCAGCCTGAAGTCTGCCGAGCTGATCGGCGTCGCGCTGGGCAAAGGGCCACAGATGCAGGCG
CGCATCGCGGAAAACCGCCAGCACCTGAAGACCGTCGCCGAGCAGATTCCGGCCAACAGCAACGTGCTGTTCGGCGTCGC
CCGCGAAGACAGCTTCTCTGTGCATGGCCCGCACTCTTATGCCGGCAGCGTGTTGCAGGCGATTGGTCTGAAGGTCCCGG
AAGTACGCAAAAACGCCGCGCCAACCGAATTCGTCAGCCTGGAGCAACTGCTGGCCCTGGACCCGGGCTGGTTGCTGGTC
GGTCATTACCGCCGTCCGAGCATCGTTGACAGCTGGAGCAAGCAGCCGCTGTGGCAGGTGCTGGGCGCGGTGCGTAACAA
GCAGGTGGCCGAAGTGGATGGCGACAGCTGGGCGCGCAATCGCGGGATCATGGCCTCCGAGCAGATCGCCGACGATGCGC
TTGCCGTGCTCAAGGGCGGCAAGGCCGTGCTGAACCCGTAA

Upstream 100 bases:

>100_bases
AGTGCCCGCCGTTTTCAACAAGAGTGCCCGCCGTTTTCTTCGCGGCCTTCAGGGCGCGCCTGTTTTTCATGATTCCGCTT
TGTTAGAAAGGACCTTTGCC

Downstream 100 bases:

>100_bases
ATGCGCCGCTGGCTGATGGCGGGCGTGATCATCGCGGCCTGCCTGGGATTGTTCTGGGTGTCGCTGTTTGCCCTGTCGTC
GTTCAGCATTCGCCAGGTGG

Product: iron-dicitrate transporter substrate-binding subunit

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: Iron(III) dicitrate-binding periplasmic protein [H]

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVGVTPVGAADDGDANRVLPKVR
KAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYNDLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQA
RIAENRQHLKTVAEQIPANSNVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV
GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGGKAVLNP

Sequences:

>Translated_306_residues
MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVGVTPVGAADDGDANRVLPKVR
KAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYNDLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQA
RIAENRQHLKTVAEQIPANSNVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV
GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGGKAVLNP
>Mature_306_residues
MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVGVTPVGAADDGDANRVLPKVR
KAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYNDLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQA
RIAENRQHLKTVAEQIPANSNVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV
GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGGKAVLNP

Specific function: Binds citrate-dependent Fe(3+); part of the binding- protein-dependent transport system for uptake of citrate-dependent Fe(3+) [H]

COG id: COG4594

COG function: function code P; ABC-type Fe3+-citrate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=290, Percent_Identity=48.2758620689655, Blast_Score=270, Evalue=7e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 32909; Mature: 32909

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCC
VTPVGAADDGDANRVLPKVRKAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCHHHHHHHH
DLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQARIAENRQHLKTVAEQIPANS
HHHHHHHEEECCCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
NVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV
CEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEE
GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGG
ECCCCCCHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHCCC
KAVLNP
CCCCCC
>Mature Secondary Structure
MRAFRLPHLLACGLLTLIASVAQAAPIDIDDGQHKVHLPDTPKRVVVLEFSFLDGLASVG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEHHHHHHHHCC
VTPVGAADDGDANRVLPKVRKAVGEWQSVGLRSQPNIEVIARLKPDLIIADLGRHQALYN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEECCHHHHHHHH
DLASLAPTLMLPSRGEDYQGSLKSAELIGVALGKGPQMQARIAENRQHLKTVAEQIPANS
HHHHHHHEEECCCCCCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
NVLFGVAREDSFSVHGPHSYAGSVLQAIGLKVPEVRKNAAPTEFVSLEQLLALDPGWLLV
CEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEEE
GHYRRPSIVDSWSKQPLWQVLGAVRNKQVAEVDGDSWARNRGIMASEQIADDALAVLKGG
ECCCCCCHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHCCC
KAVLNP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2651410; 7610040; 9278503 [H]