| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043807
Identifier: 66043807
GI number: 66043807
Start: 610174
End: 611349
Strand: Reverse
Name: 66043807
Synonym: Psyr_0540
Alternate gene names: NA
Gene position: 611349-610174 (Counterclockwise)
Preceding gene: 66043808
Following gene: 66043806
Centisome position: 10.03
GC content: 65.48
Gene sequence:
>1176_bases ATGCCATCGGTTATTTCCACTGACGTGCTGATTGTCGGGGCTGGCGTCGCCGGTCTCTGGCTCAATGCCCGGTTGCGTCG TCAAGGGTTCTCGACAGTGCTGGTAGAAAGCGCCAGCCTGGGTGGCGGGCAAAGCCTCAAGTCTCAGGGGATCATCCACG GCGGCGCCAAGTACGCGCTGCACGGCGCGCTGTCCGGTGCCTCCGAAGCCATTGCCGACATGCCGCGCCGCTGGCGTGAA GCCCTCGATGGCAAGGGCGAGCTGGACCTGTCCGGTGTACGCCTGCTGTCCGAGGCTCATTACCTGTGGTCGCCAGGCAC CATCGCCGGCAACCTCACCAGTTTTTTCGCCAGCAAGGCCGTGCGCGGTCGTGTGGATCAGGTCAAGGGTGAGCAACTGC CGCCGGCCCTGCAAAACCCCAAATTCAAAGGCAAGGTCTATCGGCTTGCCGAGCTGGTGGTCGATGTACCCAGCCTGATC GGGCGGCTTGCCGAGCTGGCCGGTGACAGCCTGCTGGCCGGTCAGCACATCGAGCCGCTCTTCGAGGGCGATGAACTGAT CGGTCTGCGCGTCGATGGTCGCGATATCCATGCGCAGCGCATTGTGCTCAGTGCCGGAGGTGGCAATGCCGACCTGCTGA ACGCACTGGGCGTGTCGCAACCGCAGATGCAACGCCGCCCGTTGCACATGGTGCTGGTCAAGGGGCCGACCCTGAAGCCG CTGTACGCTCATTGCCTGGGTGGCGGCCCCAAGCCACGCATCACCGTGACCACGCACCCGGCCGCAGACGGCCAGTGGGT GTGGTATCTGGGTGGCGATCTGGCCGAAGCCGATGGCGTGGCGCGCCAACCGGACGCGCAGATCGCCGTCGCGCGCAAAG AGCTTGAAGCGCTGCTGCCGTGGGTCGACCTGAGTCAGGCGCAGTGGGCGACCCTGCGTGTTGATCGTGCCGAGCCGGCT CAATCAGGACTGGTGCGCCCGGACAACGCCTTCCTCGACAGCCGGCAACGCCTGATGATCGGCTGGCCGACCAAGCTGGC ACTGGCTCCGGACTTCGCCGACCGAGTCCTGTCGCAGCTGTCCAGAGACGGCATCCACCCGACCCCGCAAGCTGCGCTGA GCGATGTGCCACGGCCTCCGATGGCCATACCTGTCTGGGATGAACTGCTGCCATGA
Upstream 100 bases:
>100_bases CGTGGCGGGCGTGGCGGTCATTCAGCTGTTCTCGAAAACCGCCGGGCATTGAAAACCCGATCCTTTATAATGCTGGTACT TTTCGCTCACTGAGGTGCTC
Downstream 100 bases:
>100_bases GCCTGAAAACCCTGCACGATCTGCATCGCCCGCTGGGCAGTACCGGCCTGAACGTATCGCCGCTGGGGCTGGGCACCGTC AAACTGGGGCGCGACCAGGG
Product: oxidoreductase, FAD-binding
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase Superfamily Protein; Glycerol-3-Phosphate Dehydrogenase; FAD Dependent Oxidoreductase Domain Protein
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MPSVISTDVLIVGAGVAGLWLNARLRRQGFSTVLVESASLGGGQSLKSQGIIHGGAKYALHGALSGASEAIADMPRRWRE ALDGKGELDLSGVRLLSEAHYLWSPGTIAGNLTSFFASKAVRGRVDQVKGEQLPPALQNPKFKGKVYRLAELVVDVPSLI GRLAELAGDSLLAGQHIEPLFEGDELIGLRVDGRDIHAQRIVLSAGGGNADLLNALGVSQPQMQRRPLHMVLVKGPTLKP LYAHCLGGGPKPRITVTTHPAADGQWVWYLGGDLAEADGVARQPDAQIAVARKELEALLPWVDLSQAQWATLRVDRAEPA QSGLVRPDNAFLDSRQRLMIGWPTKLALAPDFADRVLSQLSRDGIHPTPQAALSDVPRPPMAIPVWDELLP
Sequences:
>Translated_391_residues MPSVISTDVLIVGAGVAGLWLNARLRRQGFSTVLVESASLGGGQSLKSQGIIHGGAKYALHGALSGASEAIADMPRRWRE ALDGKGELDLSGVRLLSEAHYLWSPGTIAGNLTSFFASKAVRGRVDQVKGEQLPPALQNPKFKGKVYRLAELVVDVPSLI GRLAELAGDSLLAGQHIEPLFEGDELIGLRVDGRDIHAQRIVLSAGGGNADLLNALGVSQPQMQRRPLHMVLVKGPTLKP LYAHCLGGGPKPRITVTTHPAADGQWVWYLGGDLAEADGVARQPDAQIAVARKELEALLPWVDLSQAQWATLRVDRAEPA QSGLVRPDNAFLDSRQRLMIGWPTKLALAPDFADRVLSQLSRDGIHPTPQAALSDVPRPPMAIPVWDELLP >Mature_390_residues PSVISTDVLIVGAGVAGLWLNARLRRQGFSTVLVESASLGGGQSLKSQGIIHGGAKYALHGALSGASEAIADMPRRWREA LDGKGELDLSGVRLLSEAHYLWSPGTIAGNLTSFFASKAVRGRVDQVKGEQLPPALQNPKFKGKVYRLAELVVDVPSLIG RLAELAGDSLLAGQHIEPLFEGDELIGLRVDGRDIHAQRIVLSAGGGNADLLNALGVSQPQMQRRPLHMVLVKGPTLKPL YAHCLGGGPKPRITVTTHPAADGQWVWYLGGDLAEADGVARQPDAQIAVARKELEALLPWVDLSQAQWATLRVDRAEPAQ SGLVRPDNAFLDSRQRLMIGWPTKLALAPDFADRVLSQLSRDGIHPTPQAALSDVPRPPMAIPVWDELLP
Specific function: Unknown
COG id: COG0578
COG function: function code C; Glycerol-3-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41879; Mature: 41747
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVISTDVLIVGAGVAGLWLNARLRRQGFSTVLVESASLGGGQSLKSQGIIHGGAKYAL CCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEECCCHHEE HGALSGASEAIADMPRRWREALDGKGELDLSGVRLLSEAHYLWSPGTIAGNLTSFFASKA HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH VRGRVDQVKGEQLPPALQNPKFKGKVYRLAELVVDVPSLIGRLAELAGDSLLAGQHIEPL HHCCHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC FEGDELIGLRVDGRDIHAQRIVLSAGGGNADLLNALGVSQPQMQRRPLHMVLVKGPTLKP CCCCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHCCCCHHHHCCCEEEEEECCCCCCH LYAHCLGGGPKPRITVTTHPAADGQWVWYLGGDLAEADGVARQPDAQIAVARKELEALLP HHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHCC WVDLSQAQWATLRVDRAEPAQSGLVRPDNAFLDSRQRLMIGWPTKLALAPDFADRVLSQL CCCCCCCCEEEEEECCCCHHHCCCCCCCHHHHCCCCEEEEECCCCEEECCCHHHHHHHHH SRDGIHPTPQAALSDVPRPPMAIPVWDELLP HHCCCCCCCHHHHHCCCCCCEECCCHHHHCC >Mature Secondary Structure PSVISTDVLIVGAGVAGLWLNARLRRQGFSTVLVESASLGGGQSLKSQGIIHGGAKYAL CCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEECCCHHEE HGALSGASEAIADMPRRWREALDGKGELDLSGVRLLSEAHYLWSPGTIAGNLTSFFASKA HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHH VRGRVDQVKGEQLPPALQNPKFKGKVYRLAELVVDVPSLIGRLAELAGDSLLAGQHIEPL HHCCHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC FEGDELIGLRVDGRDIHAQRIVLSAGGGNADLLNALGVSQPQMQRRPLHMVLVKGPTLKP CCCCCEEEEEECCCEEEEEEEEEECCCCCHHHHHHHCCCCHHHHCCCEEEEEECCCCCCH LYAHCLGGGPKPRITVTTHPAADGQWVWYLGGDLAEADGVARQPDAQIAVARKELEALLP HHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHCC WVDLSQAQWATLRVDRAEPAQSGLVRPDNAFLDSRQRLMIGWPTKLALAPDFADRVLSQL CCCCCCCCEEEEEECCCCHHHCCCCCCCHHHHCCCCEEEEECCCCEEECCCHHHHHHHHH SRDGIHPTPQAALSDVPRPPMAIPVWDELLP HHCCCCCCCHHHHHCCCCCCEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA