Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is yccK [H]

Identifier: 66043806

GI number: 66043806

Start: 609362

End: 610177

Strand: Reverse

Name: yccK [H]

Synonym: Psyr_0539

Alternate gene names: 66043806

Gene position: 610177-609362 (Counterclockwise)

Preceding gene: 66043807

Following gene: 66043805

Centisome position: 10.01

GC content: 61.4

Gene sequence:

>816_bases
ATGAGCCTGAAAACCCTGCACGATCTGCATCGCCCGCTGGGCAGTACCGGCCTGAACGTATCGCCGCTGGGGCTGGGCAC
CGTCAAACTGGGGCGCGACCAGGGCGTCAAATACCCCAGCGGCTTCAAGATTCCCGATGACCAGCAGGCGCAGATGCTGC
TGCGCATGGCCCGCGACATGGGCATCAACCTGATCGACACGGCGCCCGCCTACGGCACCAGCGAAGAGCGCCTGGGGCCG
CTGCTGCGCGGTCAGCGCCAGGACTGGGTGATCGTCAGCAAGGTTGGCGAGGAATTCGTCAACGGCGAGTCGAGCCATGA
CTTCAGTGCCGCCCATACACGCACATCGGTCGAACGCAGCCTGAAACGTCTTGAAACTGACTTTCTCGATCTGGTTCTGG
TGCATTCGGACGGCAACGACCTGGCGATCCTCAACGACACCGAGGTATACCAGACGCTCGCCGACCTCAAACGCGAAGGC
AAGATTCGTGGCTTCGGCTTTTCCGGCAAGACCGTCGAAGGCGGCCTGCTGGCGCTGCGTGAGGGTGACTGCGCAATGGT
CACCTACAACCTCAACGAGCAGGACGAAAAGCCGGTACTGGATTACGCGCAGGCTCATGGCAAGGGCATTCTGGTGAAGA
AAGCGCTGGCCAGTGGTCATGTCTGCCTGACACCCGGCACGGACCCGGTCCACGCCAGTTTCCAGCTACTGTTTGAACAT
CCGGCGGTTGCCAGTGCTATTGTCGGCACCATCAACCCGTTGCACCTGGCACACAACGTTGCAACTGCCGCAGCCGTGAT
TTGCCGTCAAGCCTGA

Upstream 100 bases:

>100_bases
CGCAGCTGTCCAGAGACGGCATCCACCCGACCCCGCAAGCTGCGCTGAGCGATGTGCCACGGCCTCCGATGGCCATACCT
GTCTGGGATGAACTGCTGCC

Downstream 100 bases:

>100_bases
TTAAGGCGGCCGACCCCAACGCAAGAAGGAGCCGTTATGCCGCGAACACTGATCCGGAAGAATCCCAGCAACTTCAAGAC
CCTGCCGCTGTTTGTCGAGG

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSLKTLHDLHRPLGSTGLNVSPLGLGTVKLGRDQGVKYPSGFKIPDDQQAQMLLRMARDMGINLIDTAPAYGTSEERLGP
LLRGQRQDWVIVSKVGEEFVNGESSHDFSAAHTRTSVERSLKRLETDFLDLVLVHSDGNDLAILNDTEVYQTLADLKREG
KIRGFGFSGKTVEGGLLALREGDCAMVTYNLNEQDEKPVLDYAQAHGKGILVKKALASGHVCLTPGTDPVHASFQLLFEH
PAVASAIVGTINPLHLAHNVATAAAVICRQA

Sequences:

>Translated_271_residues
MSLKTLHDLHRPLGSTGLNVSPLGLGTVKLGRDQGVKYPSGFKIPDDQQAQMLLRMARDMGINLIDTAPAYGTSEERLGP
LLRGQRQDWVIVSKVGEEFVNGESSHDFSAAHTRTSVERSLKRLETDFLDLVLVHSDGNDLAILNDTEVYQTLADLKREG
KIRGFGFSGKTVEGGLLALREGDCAMVTYNLNEQDEKPVLDYAQAHGKGILVKKALASGHVCLTPGTDPVHASFQLLFEH
PAVASAIVGTINPLHLAHNVATAAAVICRQA
>Mature_270_residues
SLKTLHDLHRPLGSTGLNVSPLGLGTVKLGRDQGVKYPSGFKIPDDQQAQMLLRMARDMGINLIDTAPAYGTSEERLGPL
LRGQRQDWVIVSKVGEEFVNGESSHDFSAAHTRTSVERSLKRLETDFLDLVLVHSDGNDLAILNDTEVYQTLADLKREGK
IRGFGFSGKTVEGGLLALREGDCAMVTYNLNEQDEKPVLDYAQAHGKGILVKKALASGHVCLTPGTDPVHASFQLLFEHP
AVASAIVGTINPLHLAHNVATAAAVICRQA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI87081735, Length=226, Percent_Identity=29.646017699115, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788070, Length=172, Percent_Identity=31.3953488372093, Blast_Score=61, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323684, Length=160, Percent_Identity=34.375, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24646155, Length=233, Percent_Identity=33.4763948497854, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24646159, Length=171, Percent_Identity=34.5029239766082, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 29283; Mature: 29152

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKTLHDLHRPLGSTGLNVSPLGLGTVKLGRDQGVKYPSGFKIPDDQQAQMLLRMARDM
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
GINLIDTAPAYGTSEERLGPLLRGQRQDWVIVSKVGEEFVNGESSHDFSAAHTRTSVERS
CCEEEECCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LKRLETDFLDLVLVHSDGNDLAILNDTEVYQTLADLKREGKIRGFGFSGKTVEGGLLALR
HHHHHHCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCEEEECCCCCEECCCEEEEE
EGDCAMVTYNLNEQDEKPVLDYAQAHGKGILVKKALASGHVCLTPGTDPVHASFQLLFEH
CCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEHHHHCCCEEECCCCCCHHHHHHHHHCC
PAVASAIVGTINPLHLAHNVATAAAVICRQA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLKTLHDLHRPLGSTGLNVSPLGLGTVKLGRDQGVKYPSGFKIPDDQQAQMLLRMARDM
CCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
GINLIDTAPAYGTSEERLGPLLRGQRQDWVIVSKVGEEFVNGESSHDFSAAHTRTSVERS
CCEEEECCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LKRLETDFLDLVLVHSDGNDLAILNDTEVYQTLADLKREGKIRGFGFSGKTVEGGLLALR
HHHHHHCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCEEEECCCCCEECCCEEEEE
EGDCAMVTYNLNEQDEKPVLDYAQAHGKGILVKKALASGHVCLTPGTDPVHASFQLLFEH
CCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEHHHHCCCEEECCCCCCHHHHHHHHHCC
PAVASAIVGTINPLHLAHNVATAAAVICRQA
CHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274031; 9384377; 9106203 [H]