| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043805
Identifier: 66043805
GI number: 66043805
Start: 608369
End: 609325
Strand: Reverse
Name: 66043805
Synonym: Psyr_0538
Alternate gene names: NA
Gene position: 609325-608369 (Counterclockwise)
Preceding gene: 66043806
Following gene: 66043802
Centisome position: 10.0
GC content: 63.01
Gene sequence:
>957_bases ATGCCGCGAACACTGATCCGGAAGAATCCCAGCAACTTCAAGACCCTGCCGCTGTTTGTCGAGGCCACTCCGGAAAGCCT GAGCTACCAGAGCGTCGGCATGCCGATGAACTTCGCGCAAACCTTGCAGCGGCGGCGCAAGATCGACGTGCCGGACACCG AACGTTTCGCCACCGAGCTGGCCAATCTGGGGGTGTCCGTTCGCCTGACCGTCAGTTGGCAGAATCGCGATTACTGGGTG CTGGTCCGCCAGCGTCGTCAGGACCGCGGCGACGTCGTACTCAAGCTGATCTCGGGTTATGTCCCGGCCCATGAGCTGAC ACTGCCGCTGCACACCGCGATTCAGGAAGTGGCCGAAGAGTGCCTGATCGAAACACCGCAGGGCTGGCTGAGCGGGCTGT TCAAGGAGACCTGGCTGCCTGCGCCCTATGCTGCCGCGCTGCATTATCGCGAGGCCATGCCGTTTCGCCTCAGCCCCCTC TCCGGCGCCGCGAGACCTGTTCGAACCGGCAGCCTGACCCTGCTGGAGCGTCCACGGGCCTATGTGCATTTGCCCACGGC GTCGTTGCAGCTGATTTACGACATGCGCCTGGAAATCCCCAAGGAAGCGCGCCCGGTCAGCCTTTTCCATGTCGACGAAG CCCTGGAAAACGATCAACTGGTCGCTCGCCTCAACCGCAGCAAACCTGACCTGTATCTGATGCCGCTGGAGAATGGCGCG CCCCTGCCTGAGCTGTACACGCTCAAGCGCGACAAGCTGATCCCGGCCGGCACGAGAGGGCTGTACCTGGCCGAGAGTTT CGCCGCGCAGGATGGCTGGGTGGTGCGTGAAGAGCGGATTCGCTGGAAGGACTGGCTGCGTCAGCAGGGCATGGCCCCAC CGGCGAAGAAGTCAGGGCTCAAACGCCTGACCGGCAAGGCCCGGGAGCTGTTGCACTCCATTAGTGGCAAGCTGTAA
Upstream 100 bases:
>100_bases CAACCCGTTGCACCTGGCACACAACGTTGCAACTGCCGCAGCCGTGATTTGCCGTCAAGCCTGATTAAGGCGGCCGACCC CAACGCAAGAAGGAGCCGTT
Downstream 100 bases:
>100_bases GCCTCAAGCCTCAAGCCTCAAGCCTCAAGCCTCAAGCCTCAAGCCTTTTGATTTGATCTGCTGTGGCTTGTAGCTTGTAG CTTGCAGCTTGTAGCTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MPRTLIRKNPSNFKTLPLFVEATPESLSYQSVGMPMNFAQTLQRRRKIDVPDTERFATELANLGVSVRLTVSWQNRDYWV LVRQRRQDRGDVVLKLISGYVPAHELTLPLHTAIQEVAEECLIETPQGWLSGLFKETWLPAPYAAALHYREAMPFRLSPL SGAARPVRTGSLTLLERPRAYVHLPTASLQLIYDMRLEIPKEARPVSLFHVDEALENDQLVARLNRSKPDLYLMPLENGA PLPELYTLKRDKLIPAGTRGLYLAESFAAQDGWVVREERIRWKDWLRQQGMAPPAKKSGLKRLTGKARELLHSISGKL
Sequences:
>Translated_318_residues MPRTLIRKNPSNFKTLPLFVEATPESLSYQSVGMPMNFAQTLQRRRKIDVPDTERFATELANLGVSVRLTVSWQNRDYWV LVRQRRQDRGDVVLKLISGYVPAHELTLPLHTAIQEVAEECLIETPQGWLSGLFKETWLPAPYAAALHYREAMPFRLSPL SGAARPVRTGSLTLLERPRAYVHLPTASLQLIYDMRLEIPKEARPVSLFHVDEALENDQLVARLNRSKPDLYLMPLENGA PLPELYTLKRDKLIPAGTRGLYLAESFAAQDGWVVREERIRWKDWLRQQGMAPPAKKSGLKRLTGKARELLHSISGKL >Mature_317_residues PRTLIRKNPSNFKTLPLFVEATPESLSYQSVGMPMNFAQTLQRRRKIDVPDTERFATELANLGVSVRLTVSWQNRDYWVL VRQRRQDRGDVVLKLISGYVPAHELTLPLHTAIQEVAEECLIETPQGWLSGLFKETWLPAPYAAALHYREAMPFRLSPLS GAARPVRTGSLTLLERPRAYVHLPTASLQLIYDMRLEIPKEARPVSLFHVDEALENDQLVARLNRSKPDLYLMPLENGAP LPELYTLKRDKLIPAGTRGLYLAESFAAQDGWVVREERIRWKDWLRQQGMAPPAKKSGLKRLTGKARELLHSISGKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36264; Mature: 36132
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTLIRKNPSNFKTLPLFVEATPESLSYQSVGMPMNFAQTLQRRRKIDVPDTERFATEL CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH ANLGVSVRLTVSWQNRDYWVLVRQRRQDRGDVVLKLISGYVPAHELTLPLHTAIQEVAEE HHCCEEEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHCCCCHHHEECHHHHHHHHHHHH CLIETPQGWLSGLFKETWLPAPYAAALHYREAMPFRLSPLSGAARPVRTGSLTLLERPRA HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCE YVHLPTASLQLIYDMRLEIPKEARPVSLFHVDEALENDQLVARLNRSKPDLYLMPLENGA EEEECCHHEEEEEEHHHCCCCCCCCEEEEEHHHHHCCCHHHHHHCCCCCCEEEEECCCCC PLPELYTLKRDKLIPAGTRGLYLAESFAAQDGWVVREERIRWKDWLRQQGMAPPAKKSGL CCCHHHHHHCCCCCCCCCCCEEEHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHH KRLTGKARELLHSISGKL HHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRTLIRKNPSNFKTLPLFVEATPESLSYQSVGMPMNFAQTLQRRRKIDVPDTERFATEL CCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHH ANLGVSVRLTVSWQNRDYWVLVRQRRQDRGDVVLKLISGYVPAHELTLPLHTAIQEVAEE HHCCEEEEEEEEECCCCEEEEEEHHCCCHHHHHHHHHHCCCCHHHEECHHHHHHHHHHHH CLIETPQGWLSGLFKETWLPAPYAAALHYREAMPFRLSPLSGAARPVRTGSLTLLERPRA HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCCE YVHLPTASLQLIYDMRLEIPKEARPVSLFHVDEALENDQLVARLNRSKPDLYLMPLENGA EEEECCHHEEEEEEHHHCCCCCCCCEEEEEHHHHHCCCHHHHHHCCCCCCEEEEECCCCC PLPELYTLKRDKLIPAGTRGLYLAESFAAQDGWVVREERIRWKDWLRQQGMAPPAKKSGL CCCHHHHHHCCCCCCCCCCCEEEHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHH KRLTGKARELLHSISGKL HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA