BacMap

Definition	Pseudomonas syringae pv. syringae B728a, complete genome.
Accession	NC_007005
Length	6,093,698

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The map label for this gene is dbpA [H]

Identifier: 66043783

GI number: 66043783

Start: 572766

End: 574187

Strand: Reverse

Name: dbpA [H]

Synonym: Psyr_0516

Alternate gene names: 66043783

Gene position: 574187-572766 (Counterclockwise)

Preceding gene: 66043784

Following gene: 66043782

Centisome position: 9.42

GC content: 61.46

Gene sequence:

>1422_bases
GTGATACACTACGCGACATTTTTGTTTTGCAGGTCCACCGTCGTGACTAACACCGCTTTCAATTCCCTGCCTCTGTCCGC
TGCCATGCTGGCTAACCTGGAGTCGCTTGGTTATGCCGAAATGACACCGATTCAGGCGCAGAGCCTGCCGGTGATCCTCA
AGGGCATGGACCTGATCGCGCAAGCCAAGACCGGCAGCGGCAAGACCGCTGCGTTCGGCATCGGCCTGCTCAACCCGATC
AACCCGCGTTTCTTCGGTTGTCAGGCACTGGTCATGTGTCCGACCCGCGAACTGGCGGATCAGGTGGCCAAGGAAATCCG
CCGTCTGGCGCGTTCCGAGGACAACATCAAGGTCCTGACCCTGTGTGGCGGCGTGTCCTTTGGCCCGCAGATCGGCTCGC
TGGAACATGGCGCACACATCATCGTCGGCACTCCGGGTCGTATACAGCAGCACTTGCGCAAGGGCTCGCTGGTCCTGGAC
GGCCTGAACACGCTGATTCTCGATGAAGCCGACCGCATGCTGGACATGGGCTTCTACGACGCCATCGCCGACATCATCGA
GCAGACTCCGCAGCGCCGTCAGACCCTGCTGTTCTCCGCCACCTACCCGGTCGGCATCAAGCAGTTGTCCTCGAAGTTCA
TGCGTGATCCGCAGACCGTCAAGGTCGAAGCGCTGCACGCCGACAGCCAGATCGAGCAGATTTTCTACGAGATCTCCCCG
GAGCAGCGCCTGGAAGCGGTGGTCAAGGTACTCGGCCATTTCCGTCCGACGTCCTGCGTGGCGTTCTGCTTCACCAAGCA
GCAGGTCCAGGAAGTGGTCGATCACCTGACCGCCAAGGGCATGTCTGCTGTCGGCCTGCATGGTGATCTGGAACAGCGTG
ACCGTGATCAGGTACTGGCGATGTTCGCCAACCGCAGTACCTCGGTACTGGTCGCCACGGACGTAGCCGCGCGCGGTCTG
GATATCGACGCGCTGGACATGGTGATCAACGTCGAGCTGGCGCGTGATTCGGAAATCCACATCCACCGCGTCGGCCGCAC
CGGTCGTGCCGGCGAGAAAGGCATCGCGGTCAGCCTCGTGGCCCCGTCGGAAAGCCAGCGCGCCCGTGCCATCGAAGAAT
TGCAGAAAGCGCCGTTGAACTGGCAGCAATACGACAGACTGAGCATCAAGGAAGGCGGCAAGCTGCTGCCCGCCATGACC
ACGCTGTGCATCGGCTCGGGCCGCAAGGACAAGCTGCGTCCAGGCGACATCCTCGGCGCACTGACCGGCGAGGCAGGCAT
TGCGGGCACTCAGGTCGGCAAGATCGCGATTTTCGACTTCCAGGCCTACGTTGCCGTCGAGCGCAGCATGGCCAAACAGG
CCCTGGAGCGTTTGAACAATGGCAAGATCAAGGGCAAGTCGCTGCGCGTGCGGATTTTGTAA

Upstream 100 bases:

>100_bases
GACCATGGTCCAGACGCCCCATCTTCTGGGACTGTAAGGGCCCCTTCGCGAGCAAGCTCGCTCCCACGACCTTTATCGCG
GTGCCAGGTCTGACTGGCGG

Downstream 100 bases:

>100_bases
AGTTTATCGTTGACCCTGATAGTCCCTACACGCCGCGCCGAGCGTCATATACAGGCCCCGAAGGTCCTGAAAACGCGGTT
TTCAGGCTTCTGCGGCCAGA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MIHYATFLFCRSTVVTNTAFNSLPLSAAMLANLESLGYAEMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPI
NPRFFGCQALVMCPTRELADQVAKEIRRLARSEDNIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLD
GLNTLILDEADRMLDMGFYDAIADIIEQTPQRRQTLLFSATYPVGIKQLSSKFMRDPQTVKVEALHADSQIEQIFYEISP
EQRLEAVVKVLGHFRPTSCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGL
DIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSESQRARAIEELQKAPLNWQQYDRLSIKEGGKLLPAMT
TLCIGSGRKDKLRPGDILGALTGEAGIAGTQVGKIAIFDFQAYVAVERSMAKQALERLNNGKIKGKSLRVRIL

Sequences:

>Translated_473_residues
MIHYATFLFCRSTVVTNTAFNSLPLSAAMLANLESLGYAEMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPI
NPRFFGCQALVMCPTRELADQVAKEIRRLARSEDNIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLD
GLNTLILDEADRMLDMGFYDAIADIIEQTPQRRQTLLFSATYPVGIKQLSSKFMRDPQTVKVEALHADSQIEQIFYEISP
EQRLEAVVKVLGHFRPTSCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGL
DIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSESQRARAIEELQKAPLNWQQYDRLSIKEGGKLLPAMT
TLCIGSGRKDKLRPGDILGALTGEAGIAGTQVGKIAIFDFQAYVAVERSMAKQALERLNNGKIKGKSLRVRIL
>Mature_473_residues
MIHYATFLFCRSTVVTNTAFNSLPLSAAMLANLESLGYAEMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPI
NPRFFGCQALVMCPTRELADQVAKEIRRLARSEDNIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLD
GLNTLILDEADRMLDMGFYDAIADIIEQTPQRRQTLLFSATYPVGIKQLSSKFMRDPQTVKVEALHADSQIEQIFYEISP
EQRLEAVVKVLGHFRPTSCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGL
DIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSESQRARAIEELQKAPLNWQQYDRLSIKEGGKLLPAMT
TLCIGSGRKDKLRPGDILGALTGEAGIAGTQVGKIAIFDFQAYVAVERSMAKQALERLNNGKIKGKSLRVRIL

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=361, Percent_Identity=38.781163434903, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI45446743, Length=361, Percent_Identity=38.781163434903, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=33.7837837837838, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI13129006, Length=382, Percent_Identity=37.696335078534, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=36.6946778711485, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI50659095, Length=406, Percent_Identity=35.4679802955665, Blast_Score=221, Evalue=8e-58,
Organism=Homo sapiens, GI148613856, Length=366, Percent_Identity=35.792349726776, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI38201710, Length=366, Percent_Identity=35.792349726776, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=30.3523035230352, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI87196351, Length=365, Percent_Identity=36.1643835616438, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI301171475, Length=365, Percent_Identity=36.1643835616438, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI169881239, Length=364, Percent_Identity=36.5384615384615, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI13514809, Length=364, Percent_Identity=36.5384615384615, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI301171467, Length=365, Percent_Identity=36.1643835616438, Blast_Score=212, Evalue=8e-55,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=36.7231638418079, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI21071032, Length=382, Percent_Identity=36.9109947643979, Blast_Score=208, Evalue=7e-54,
Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=34.9295774647887, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI20149629, Length=360, Percent_Identity=35, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=34.9295774647887, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=34.9295774647887, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=34.9295774647887, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=34.7708894878706, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI222352149, Length=358, Percent_Identity=34.3575418994413, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI224593278, Length=373, Percent_Identity=38.3378016085791, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI31542656, Length=372, Percent_Identity=36.2903225806452, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=32.3759791122715, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=34.7708894878706, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI13514831, Length=364, Percent_Identity=35.7142857142857, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI4758112, Length=368, Percent_Identity=30.7065217391304, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI18375623, Length=368, Percent_Identity=30.7065217391304, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI21040371, Length=368, Percent_Identity=30.1630434782609, Blast_Score=192, Evalue=6e-49,
Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=34.5714285714286, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=34.5714285714286, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI55749865, Length=370, Percent_Identity=31.6216216216216, Blast_Score=190, Evalue=3e-48,
Organism=Homo sapiens, GI188035877, Length=388, Percent_Identity=32.2164948453608, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI41327779, Length=415, Percent_Identity=30.1204819277108, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI38327634, Length=376, Percent_Identity=33.2446808510638, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI256223453, Length=357, Percent_Identity=29.6918767507003, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI41327776, Length=359, Percent_Identity=31.4763231197772, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=30.0242130750605, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI6005743, Length=370, Percent_Identity=29.1891891891892, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=29.1891891891892, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI62241022, Length=346, Percent_Identity=29.4797687861272, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI164419732, Length=347, Percent_Identity=30.2593659942363, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI38569503, Length=362, Percent_Identity=29.8342541436464, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI38569505, Length=362, Percent_Identity=29.8342541436464, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI62241024, Length=323, Percent_Identity=29.7213622291022, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=30.7692307692308, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI9506931, Length=395, Percent_Identity=28.3544303797468, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI9966805, Length=311, Percent_Identity=32.1543408360129, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI20336298, Length=372, Percent_Identity=27.9569892473118, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI256773275, Length=357, Percent_Identity=28.2913165266106, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI154759257, Length=409, Percent_Identity=25.9168704156479, Blast_Score=96, Evalue=5e-20,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=55.7986870897155, Blast_Score=503, Evalue=1e-144,
Organism=Escherichia coli, GI87082221, Length=360, Percent_Identity=40, Blast_Score=271, Evalue=5e-74,
Organism=Escherichia coli, GI1787016, Length=365, Percent_Identity=39.4520547945205, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1790214, Length=371, Percent_Identity=34.2318059299191, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1788930, Length=374, Percent_Identity=35.0267379679144, Blast_Score=187, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=35.9459459459459, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=35.5013550135501, Blast_Score=249, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI71987143, Length=356, Percent_Identity=33.7078651685393, Blast_Score=228, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI115533224, Length=362, Percent_Identity=37.5690607734807, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=37.292817679558, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=378, Percent_Identity=36.7724867724868, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17510309, Length=378, Percent_Identity=36.7724867724868, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=378, Percent_Identity=36.7724867724868, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI86570094, Length=350, Percent_Identity=38, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=374, Percent_Identity=35.8288770053476, Blast_Score=204, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=33.810888252149, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=33.810888252149, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=30.939226519337, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=369, Percent_Identity=33.6043360433604, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=382, Percent_Identity=34.8167539267016, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17507881, Length=408, Percent_Identity=32.5980392156863, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=37.3219373219373, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=34.3007915567282, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI193206561, Length=360, Percent_Identity=31.6666666666667, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=30.1630434782609, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17537549, Length=363, Percent_Identity=34.7107438016529, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=32.0754716981132, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17507945, Length=339, Percent_Identity=37.4631268436578, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=32.0754716981132, Blast_Score=186, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=34.7368421052632, Blast_Score=185, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI17509811, Length=361, Percent_Identity=33.7950138504155, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17505370, Length=374, Percent_Identity=32.3529411764706, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=29.6587926509186, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=29.6587926509186, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=29.6587926509186, Blast_Score=158, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=26.2872628726287, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI193208216, Length=388, Percent_Identity=29.639175257732, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=29.3367346938776, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17556951, Length=360, Percent_Identity=27.7777777777778, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=33.8235294117647, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=29.287598944591, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=29.6495956873315, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=27.2727272727273, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=26.8072289156627, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI25148203, Length=411, Percent_Identity=25.0608272506083, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=38.1443298969072, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=33.6043360433604, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=37.2159090909091, Blast_Score=230, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=35.7142857142857, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6321360, Length=365, Percent_Identity=36.986301369863, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=34.8404255319149, Blast_Score=217, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6323021, Length=400, Percent_Identity=36, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6320041, Length=356, Percent_Identity=31.4606741573034, Blast_Score=206, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=35.0267379679144, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6322912, Length=357, Percent_Identity=34.1736694677871, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6322323, Length=357, Percent_Identity=34.1736694677871, Blast_Score=192, Evalue=7e-50,
Organism=Saccharomyces cerevisiae, GI6320449, Length=380, Percent_Identity=32.8947368421053, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=376, Percent_Identity=34.5744680851064, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=31.3397129186603, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6324620, Length=395, Percent_Identity=28.8607594936709, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6321963, Length=372, Percent_Identity=34.9462365591398, Blast_Score=179, Evalue=7e-46,
Organism=Saccharomyces cerevisiae, GI6323947, Length=380, Percent_Identity=33.4210526315789, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=31.358024691358, Blast_Score=176, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6320119, Length=365, Percent_Identity=26.5753424657534, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=29.2682926829268, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=382, Percent_Identity=27.7486910994764, Blast_Score=152, Evalue=8e-38,
Organism=Saccharomyces cerevisiae, GI6320400, Length=405, Percent_Identity=26.9135802469136, Blast_Score=136, Evalue=8e-33,
Organism=Saccharomyces cerevisiae, GI6321267, Length=354, Percent_Identity=30.225988700565, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6322876, Length=479, Percent_Identity=26.5135699373695, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6323306, Length=219, Percent_Identity=32.8767123287671, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=34.4173441734417, Blast_Score=237, Evalue=2e-62,
Organism=Drosophila melanogaster, GI28574962, Length=342, Percent_Identity=39.1812865497076, Blast_Score=229, Evalue=4e-60,
Organism=Drosophila melanogaster, GI18857967, Length=383, Percent_Identity=36.5535248041775, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=35.7142857142857, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=35.7142857142857, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=35.7142857142857, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=35.7142857142857, Blast_Score=219, Evalue=4e-57,
Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=35.7142857142857, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=35.7142857142857, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=35.7142857142857, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24662330, Length=360, Percent_Identity=38.0555555555556, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=35.6756756756757, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24584399, Length=397, Percent_Identity=34.5088161209068, Blast_Score=212, Evalue=6e-55,
Organism=Drosophila melanogaster, GI21355075, Length=360, Percent_Identity=35.8333333333333, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=36.1111111111111, Blast_Score=209, Evalue=2e-54,
Organism=Drosophila melanogaster, GI28575014, Length=352, Percent_Identity=35.5113636363636, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI24642151, Length=390, Percent_Identity=34.8717948717949, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24582080, Length=360, Percent_Identity=34.1666666666667, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24582078, Length=360, Percent_Identity=34.1666666666667, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI17136248, Length=360, Percent_Identity=34.1666666666667, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24582075, Length=360, Percent_Identity=34.1666666666667, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=32.9842931937173, Blast_Score=203, Evalue=3e-52,
Organism=Drosophila melanogaster, GI24583281, Length=366, Percent_Identity=31.1475409836066, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24583279, Length=366, Percent_Identity=31.1475409836066, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=34.435261707989, Blast_Score=194, Evalue=8e-50,
Organism=Drosophila melanogaster, GI24581954, Length=369, Percent_Identity=31.7073170731707, Blast_Score=194, Evalue=8e-50,
Organism=Drosophila melanogaster, GI24581952, Length=369, Percent_Identity=31.7073170731707, Blast_Score=194, Evalue=8e-50,
Organism=Drosophila melanogaster, GI24581956, Length=369, Percent_Identity=31.7073170731707, Blast_Score=194, Evalue=8e-50,
Organism=Drosophila melanogaster, GI21356161, Length=359, Percent_Identity=37.0473537604457, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI281365720, Length=302, Percent_Identity=38.0794701986755, Blast_Score=188, Evalue=8e-48,
Organism=Drosophila melanogaster, GI17136814, Length=387, Percent_Identity=33.5917312661499, Blast_Score=181, Evalue=8e-46,
Organism=Drosophila melanogaster, GI28571808, Length=391, Percent_Identity=34.2710997442455, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI28571809, Length=391, Percent_Identity=34.2710997442455, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI21355559, Length=379, Percent_Identity=32.4538258575198, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI17647335, Length=365, Percent_Identity=30.6849315068493, Blast_Score=172, Evalue=4e-43,
Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=29.144385026738, Blast_Score=152, Evalue=6e-37,
Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=31.9018404907975, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24666101, Length=372, Percent_Identity=29.8387096774194, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI20130173, Length=440, Percent_Identity=27.9545454545455, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24643725, Length=400, Percent_Identity=26.5, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI28571338, Length=227, Percent_Identity=33.4801762114537, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI18859659, Length=227, Percent_Identity=33.4801762114537, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19920478, Length=362, Percent_Identity=27.3480662983425, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI17136666, Length=406, Percent_Identity=28.0788177339901, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24640164, Length=351, Percent_Identity=23.6467236467236, Blast_Score=92, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 51554; Mature: 51554

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHYATFLFCRSTVVTNTAFNSLPLSAAMLANLESLGYAEMTPIQAQSLPVILKGMDLIA
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHE
QAKTGSGKTAAFGIGLLNPINPRFFGCQALVMCPTRELADQVAKEIRRLARSEDNIKVLT
ECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEE
LCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYD
EECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH
AIADIIEQTPQRRQTLLFSATYPVGIKQLSSKFMRDPQTVKVEALHADSQIEQIFYEISP
HHHHHHHHCCHHHHEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCH
EQRLEAVVKVLGHFRPTSCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRDRDQVLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHH
MFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLV
HHHCCCCEEEEEECHHHCCCCCHHEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEE
APSESQRARAIEELQKAPLNWQQYDRLSIKEGGKLLPAMTTLCIGSGRKDKLRPGDILGA
CCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE
LTGEAGIAGTQVGKIAIFDFQAYVAVERSMAKQALERLNNGKIKGKSLRVRIL
ECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEC
>Mature Secondary Structure
MIHYATFLFCRSTVVTNTAFNSLPLSAAMLANLESLGYAEMTPIQAQSLPVILKGMDLIA
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHE
QAKTGSGKTAAFGIGLLNPINPRFFGCQALVMCPTRELADQVAKEIRRLARSEDNIKVLT
ECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEE
LCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYD
EECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH
AIADIIEQTPQRRQTLLFSATYPVGIKQLSSKFMRDPQTVKVEALHADSQIEQIFYEISP
HHHHHHHHCCHHHHEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCH
EQRLEAVVKVLGHFRPTSCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRDRDQVLA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHH
MFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLV
HHHCCCCEEEEEECHHHCCCCCHHEEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEE
APSESQRARAIEELQKAPLNWQQYDRLSIKEGGKLLPAMTTLCIGSGRKDKLRPGDILGA
CCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEE
LTGEAGIAGTQVGKIAIFDFQAYVAVERSMAKQALERLNNGKIKGKSLRVRIL
ECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]