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The map label for this gene is aidB [C]

Identifier: 66043772

GI number: 66043772

Start: 555612

End: 557414

Strand: Reverse

Name: aidB [C]

Synonym: Psyr_0505

Alternate gene names: 66043772

Gene position: 557414-555612 (Counterclockwise)

Preceding gene: 161486739

Following gene: 161486740

Centisome position: 9.15

GC content: 59.46

Gene sequence:

>1803_bases
ATGTCCGAGTCGCTGCTCAGTTCCCGAAATCTGGCTTTCGAGCTGTATGAAGTGCTGGACGCCGAAGGGCTGACGCGTCG
CGAGCGCTTTGCCGAGCATTCGCGGGAAACCTTTGATGCGGCGCTGGGGACGGCGCGCGTCATTGCAGAAAAGTACTTTG
CACCGCACAACCGCAAGGCTGACGAAAACGAGCCGCGCTATGAAAAGGGCGAGGCGATTCTGATCCCGGAGGTCAAGCCC
GCGGTGGATGCGTTTATTGCGGCAGGCTTTCTCAACGCATCGCGTGATTTCGACGTGGGTGGCATGCAGTTGCCTACACT
GCTGTCGCAGGCCTGCTTTGCCCACTTCCAGGCCGCCAACGTCGGGACCACGTCCTATCCGTTTCTGACCATGGGCGCTG
CAAACCTGATCGAAAGTTTTGGCAGTGACGAGCAGAAGCAACGCTTTCTGCAACCGATGATCGAGGGGCGCTTTTTCGGC
ACCATGGCGCTGACCGAGCCCCATGCGGGTTCATCATTGTCAGACATCCGCACACGCGCCGAACCGGCAGATAACGGTAC
GTATCGGCTGCGCGGCAACAAGATATTCATTTCCGGGGGCGATCATTCGCTGTCGGAAAATATCGTGCACCTGGTGCTGG
CGAAACTGCCAGATGCACCAGGGGGCGTCAAAGGCATCTCACTGTTCATCGTGCCCAAGTTTCTGGTCAACGAAGACGGC
AGTCTCGGCAAGCGTAACGATGTGCTGCTGGCCGGGCTTTTTCACAAGATGGGCTGGAAAGGTACGACCTCTACAGCGCT
GAACTTCGGCGATAACGGCGAGTGCGTCGGCTATCTGGTCGGCAAGCCTCATCACGGTTTGAGTTACATGTTCCAGATGA
TGAACGAAGCGCGTATCGGCGTTGGCCTGGGCGCTGTCATGTTGGGCTACGCCGGTTATCTGTATTCGCTGGATTACGCT
CGGGATCGACCTCAGGGTCGCCTGCCCGACAGCAAAAGCCCCGAGAGCACGCCCGTGCCGATCATCCAGCATGCTGACGT
GCGGCGCATGCTGCTGACCCAGAAGGCTTACGTAGAGGGCGCGTTTGACCTGTGTCTGTATGCCTCACGGCTGTTCGACG
ACACCCAGACCGGAGAAACCGAAGACGTCCGCAAGCACGCCCATGAGCTGCTGGACCTGCTGACCCCCGTCGTCAAATCC
TGGCCTTCGGAGTTCTGCCTGAAGGCCAATGAACTGGCGATTCAGGTGCTCGGCGGTCATGGTTACACCCGCGAGTACCC
CGTTGAGCAGTACTACCGTGACAACCGGCTCAATCCGATTCATGAAGGCACTCACGGCATCCAGTCACTGGACCTGCTCG
GGCGCAAGCTGGCGCAGAACGGTGGCACCGGCCTCAAGCAACTGCTGCGCCTGATCGCCAACACCTGCGAGCGCGCACAG
GCTCACGAGTCACTCGTTGAACTGCGCCAGCCTCTGGAGCAATTGATTGCTCGCTTGCAGGCTGTCACTCTGGGGCTGCT
GGGCGATCTGGCGCAAGGCAGGATCACCAGCACACTGGCCAACTCGGCGCTGTACCTCAAGGCATTCGGTCACACGGTAA
TCGGCTGGCGCTGGCTGGAACAGGCAATCCGCGCCGAGGAAGGCCTGGGCAAGGGCAATTCGGCCGACAGCGACTTCTAC
CACGGCAAACTGCAAGCTGCCCGGTATTTCCTGACGTGGGAAGTACCGGGCTGCCATCATGAACTGACGATTCTGGAAAA
CCGCGATGACACCTGTCTGGCAATGCGCGATGACTGGTTCTGA

Upstream 100 bases:

>100_bases
GCCCCCTCACCCACGCTCGACCATCACCCGAATCAATCTTGCTACCCTCGCCCCTCAACCCGACCTAGACTTGAGCCATT
CCAAGAACAGGTACGCCATC

Downstream 100 bases:

>100_bases
TCAAAACCAGGCTGGCTGTTGATCAGCGCGGGCTGAACAGGTCTGTCATTGGATTCTGCGGAAAAAACCGGTCGACCAGT
ACCTTGGCATCTGTCCCCAG

Product: Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MSESLLSSRNLAFELYEVLDAEGLTRRERFAEHSRETFDAALGTARVIAEKYFAPHNRKADENEPRYEKGEAILIPEVKP
AVDAFIAAGFLNASRDFDVGGMQLPTLLSQACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFLQPMIEGRFFG
TMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHLVLAKLPDAPGGVKGISLFIVPKFLVNEDG
SLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSLDYA
RDRPQGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLTPVVKS
WPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGTGLKQLLRLIANTCERAQ
AHESLVELRQPLEQLIARLQAVTLGLLGDLAQGRITSTLANSALYLKAFGHTVIGWRWLEQAIRAEEGLGKGNSADSDFY
HGKLQAARYFLTWEVPGCHHELTILENRDDTCLAMRDDWF

Sequences:

>Translated_600_residues
MSESLLSSRNLAFELYEVLDAEGLTRRERFAEHSRETFDAALGTARVIAEKYFAPHNRKADENEPRYEKGEAILIPEVKP
AVDAFIAAGFLNASRDFDVGGMQLPTLLSQACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFLQPMIEGRFFG
TMALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHLVLAKLPDAPGGVKGISLFIVPKFLVNEDG
SLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSLDYA
RDRPQGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLTPVVKS
WPSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGTGLKQLLRLIANTCERAQ
AHESLVELRQPLEQLIARLQAVTLGLLGDLAQGRITSTLANSALYLKAFGHTVIGWRWLEQAIRAEEGLGKGNSADSDFY
HGKLQAARYFLTWEVPGCHHELTILENRDDTCLAMRDDWF
>Mature_599_residues
SESLLSSRNLAFELYEVLDAEGLTRRERFAEHSRETFDAALGTARVIAEKYFAPHNRKADENEPRYEKGEAILIPEVKPA
VDAFIAAGFLNASRDFDVGGMQLPTLLSQACFAHFQAANVGTTSYPFLTMGAANLIESFGSDEQKQRFLQPMIEGRFFGT
MALTEPHAGSSLSDIRTRAEPADNGTYRLRGNKIFISGGDHSLSENIVHLVLAKLPDAPGGVKGISLFIVPKFLVNEDGS
LGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIGVGLGAVMLGYAGYLYSLDYAR
DRPQGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEGAFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLTPVVKSW
PSEFCLKANELAIQVLGGHGYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGTGLKQLLRLIANTCERAQA
HESLVELRQPLEQLIARLQAVTLGLLGDLAQGRITSTLANSALYLKAFGHTVIGWRWLEQAIRAEEGLGKGNSADSDFYH
GKLQAARYFLTWEVPGCHHELTILENRDDTCLAMRDDWF

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=27.1276595744681, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI4501857, Length=324, Percent_Identity=28.3950617283951, Blast_Score=107, Evalue=5e-23,
Organism=Homo sapiens, GI4557233, Length=321, Percent_Identity=29.595015576324, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4501859, Length=325, Percent_Identity=28.3076923076923, Blast_Score=100, Evalue=7e-21,
Organism=Homo sapiens, GI21361497, Length=408, Percent_Identity=28.1862745098039, Blast_Score=93, Evalue=8e-19,
Organism=Escherichia coli, GI87082384, Length=304, Percent_Identity=28.9473684210526, Blast_Score=97, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=321, Percent_Identity=29.595015576324, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17533517, Length=441, Percent_Identity=25.8503401360544, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=367, Percent_Identity=27.7929155313352, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86563381, Length=367, Percent_Identity=27.7929155313352, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71985184, Length=316, Percent_Identity=29.4303797468354, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=362, Percent_Identity=24.585635359116, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=165, Percent_Identity=35.7575757575758, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI21356377, Length=322, Percent_Identity=28.5714285714286, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666513, Length=318, Percent_Identity=27.3584905660377, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646207, Length=333, Percent_Identity=27.9279279279279, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24660351, Length=394, Percent_Identity=26.6497461928934, Blast_Score=85, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 66464; Mature: 66333

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESLLSSRNLAFELYEVLDAEGLTRRERFAEHSRETFDAALGTARVIAEKYFAPHNRKA
CCCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DENEPRYEKGEAILIPEVKPAVDAFIAAGFLNASRDFDVGGMQLPTLLSQACFAHFQAAN
CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
VGTTSYPFLTMGAANLIESFGSDEQKQRFLQPMIEGRFFGTMALTEPHAGSSLSDIRTRA
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHC
EPADNGTYRLRGNKIFISGGDHSLSENIVHLVLAKLPDAPGGVKGISLFIVPKFLVNEDG
CCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHCCCC
SLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIG
CCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
VGLGAVMLGYAGYLYSLDYARDRPQGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEG
CHHHHHHHHHHHHHHEEHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHH
AFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGH
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
GYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGTGLKQLLRLIANTCERAQ
CCCCCCCHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AHESLVELRQPLEQLIARLQAVTLGLLGDLAQGRITSTLANSALYLKAFGHTVIGWRWLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEHHHCCHHHHHHHHH
QAIRAEEGLGKGNSADSDFYHGKLQAARYFLTWEVPGCHHELTILENRDDTCLAMRDDWF
HHHHHHHCCCCCCCCCCCHHHCCEEEEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCC
>Mature Secondary Structure 
SESLLSSRNLAFELYEVLDAEGLTRRERFAEHSRETFDAALGTARVIAEKYFAPHNRKA
CCHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DENEPRYEKGEAILIPEVKPAVDAFIAAGFLNASRDFDVGGMQLPTLLSQACFAHFQAAN
CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
VGTTSYPFLTMGAANLIESFGSDEQKQRFLQPMIEGRFFGTMALTEPHAGSSLSDIRTRA
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHC
EPADNGTYRLRGNKIFISGGDHSLSENIVHLVLAKLPDAPGGVKGISLFIVPKFLVNEDG
CCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHCCCC
SLGKRNDVLLAGLFHKMGWKGTTSTALNFGDNGECVGYLVGKPHHGLSYMFQMMNEARIG
CCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
VGLGAVMLGYAGYLYSLDYARDRPQGRLPDSKSPESTPVPIIQHADVRRMLLTQKAYVEG
CHHHHHHHHHHHHHHEEHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHH
AFDLCLYASRLFDDTQTGETEDVRKHAHELLDLLTPVVKSWPSEFCLKANELAIQVLGGH
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC
GYTREYPVEQYYRDNRLNPIHEGTHGIQSLDLLGRKLAQNGGTGLKQLLRLIANTCERAQ
CCCCCCCHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AHESLVELRQPLEQLIARLQAVTLGLLGDLAQGRITSTLANSALYLKAFGHTVIGWRWLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEHHHCCHHHHHHHHH
QAIRAEEGLGKGNSADSDFYHGKLQAARYFLTWEVPGCHHELTILENRDDTCLAMRDDWF
HHHHHHHCCCCCCCCCCCHHHCCEEEEEEEEEEECCCCCEEEEEEECCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]