| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fbp [H]
Identifier: 66043639
GI number: 66043639
Start: 393957
End: 394967
Strand: Reverse
Name: fbp [H]
Synonym: Psyr_0370
Alternate gene names: 66043639
Gene position: 394967-393957 (Counterclockwise)
Preceding gene: 66043640
Following gene: 66043638
Centisome position: 6.48
GC content: 60.93
Gene sequence:
>1011_bases ATGTCCCGCGTCACACTAAGTCGTTACTTGATTGAGCAGACTCGCAGCAACAACACCCCTGCCGATCTGCGCTTCCTGAT CGAAGTTGTGGCGCGCGCATGCAAGGAAATCAGCCACGCCGTCTCCAAAGGCGCGCTGGGCGGCGTACTGGGCAGCATGG GCACCGAAAACGTGCAGGGCGAAGTGCAGAAAAAGCTCGATGTGATCTCCAACGAGATTCTGCTCGAAGCCAACGAATGG GGCGGTCACCTGGCCGGCATGGCGTCCGAAGAAATGGACAACGCCTACCAGATCCCGGGCAAATACCCGAAGGGTGCCTA CCTGCTGGTTTTCGACCCGCTGGACGGCTCGTCGAACATCGACATCAACGCACCGGTCGGCACCATCTTCTCGGTACTGC GCTGCCCGAACGAATACCTGAGCCAGAACGAAGCGCTGAATGAAAAGGCCTTCCTGCAGCCAGGCACCGAACAGGTCGCC GCCGGTTACGCCATCTACGGCCCGCAAACCATGCTGGTCCTGACCCTGGGCGATGGCGTGAAAGGCTTCACCCTGGACCG TGAAATGGGCAGCTTCGTGCTGACCCACGAAGACATCACCATCCCGGAGTCCACTCAGGAGTTCGCGGTCAACATGTCCA ACCAGCGCCACTGGGAAGCCCCGGTACAGCGCTACGTGAGCGAGCTGCTGGCCGGTGAAGACGGTCCGCTGAAAAAGAAC TACAACATGCGCTGGGTCGCGGCGATGGTGGCCGACGTGCACCGTATCCTGACCCGTGGCGGCCTGTTCATGTACCCGCG CGACAGCCGCGAGCCTTCCAAGCCGGGTAAACTGCGCCTGATGTACGAAGCCAACCCGATGTCCTTCCTGGTCGAACAGG CTGGCGGCGCGTCCACTGATGGCCATCAGCGCATTCTCGACATTCAGCCCGAAGGCCTGCACCAGCGCGTAGCGGTGTAC CTGGGTTCCAAGGAAGAAGTCGAACGCGCCACCGCGTATCACAAGGCGTAA
Upstream 100 bases:
>100_bases TCTGAACTGAAACAGTCTTAAGCCAGTCTCATAGCAGTATTACGTCGCCACTCGCGTTAAACTGCGCAGGTTTTCATACC CCCTATTTTCGGAGCTATCC
Downstream 100 bases:
>100_bases GACGTCTTCTGCACCGCTGGTGATCGGGCCATGCCCGATCACCAGCGCGTGAGCCGATTCTTGAAAAAACGAGCAGTCCG CCCTTCTGTCAGCCCCTTCT
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEW GGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLSQNEALNEKAFLQPGTEQVA AGYAIYGPQTMLVLTLGDGVKGFTLDREMGSFVLTHEDITIPESTQEFAVNMSNQRHWEAPVQRYVSELLAGEDGPLKKN YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTDGHQRILDIQPEGLHQRVAVY LGSKEEVERATAYHKA
Sequences:
>Translated_336_residues MSRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEW GGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLSQNEALNEKAFLQPGTEQVA AGYAIYGPQTMLVLTLGDGVKGFTLDREMGSFVLTHEDITIPESTQEFAVNMSNQRHWEAPVQRYVSELLAGEDGPLKKN YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTDGHQRILDIQPEGLHQRVAVY LGSKEEVERATAYHKA >Mature_335_residues SRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVISNEILLEANEWG GHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLSQNEALNEKAFLQPGTEQVAA GYAIYGPQTMLVLTLGDGVKGFTLDREMGSFVLTHEDITIPESTQEFAVNMSNQRHWEAPVQRYVSELLAGEDGPLKKNY NMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTDGHQRILDIQPEGLHQRVAVYL GSKEEVERATAYHKA
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI22907028, Length=325, Percent_Identity=41.5384615384615, Blast_Score=240, Evalue=1e-63, Organism=Homo sapiens, GI189083692, Length=324, Percent_Identity=39.8148148148148, Blast_Score=224, Evalue=7e-59, Organism=Homo sapiens, GI16579888, Length=324, Percent_Identity=39.8148148148148, Blast_Score=224, Evalue=7e-59, Organism=Escherichia coli, GI1790679, Length=329, Percent_Identity=42.5531914893617, Blast_Score=257, Evalue=8e-70, Organism=Caenorhabditis elegans, GI17508131, Length=331, Percent_Identity=41.3897280966767, Blast_Score=249, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6323409, Length=329, Percent_Identity=39.8176291793313, Blast_Score=244, Evalue=2e-65, Organism=Drosophila melanogaster, GI19921562, Length=333, Percent_Identity=42.3423423423423, Blast_Score=237, Evalue=7e-63, Organism=Drosophila melanogaster, GI45550998, Length=333, Percent_Identity=42.3423423423423, Blast_Score=237, Evalue=7e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37063; Mature: 36931
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQG CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNI HHHHHHHHHCCCEEEEECCCCCHHCCCCHHHCCCEEECCCCCCCCEEEEEEECCCCCCCE DINAPVGTIFSVLRCPNEYLSQNEALNEKAFLQPGTEQVAAGYAIYGPQTMLVLTLGDGV EEECCHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCHHHHHCCEEEECCCEEEEEEECCCC KGFTLDREMGSFVLTHEDITIPESTQEFAVNMSNQRHWEAPVQRYVSELLAGEDGPLKKN CCEEECCCCCCEEEEECCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTD CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC GHQRILDIQPEGLHQRVAVYLGSKEEVERATAYHKA CCCEEEECCCCCHHHEEHEEECCHHHHHHHHHHCCC >Mature Secondary Structure SRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQG CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EVQKKLDVISNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNI HHHHHHHHHCCCEEEEECCCCCHHCCCCHHHCCCEEECCCCCCCCEEEEEEECCCCCCCE DINAPVGTIFSVLRCPNEYLSQNEALNEKAFLQPGTEQVAAGYAIYGPQTMLVLTLGDGV EEECCHHHHHHHHHCCHHHHHCCCCCCCHHHCCCCHHHHHCCEEEECCCEEEEEEECCCC KGFTLDREMGSFVLTHEDITIPESTQEFAVNMSNQRHWEAPVQRYVSELLAGEDGPLKKN CCEEECCCCCCEEEEECCCCCCCCCHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTD CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC GHQRILDIQPEGLHQRVAVYLGSKEEVERATAYHKA CCCEEEECCCCCHHHEEHEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA