| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043640
Identifier: 66043640
GI number: 66043640
Start: 395102
End: 396481
Strand: Reverse
Name: 66043640
Synonym: Psyr_0371
Alternate gene names: NA
Gene position: 396481-395102 (Counterclockwise)
Preceding gene: 66043641
Following gene: 66043639
Centisome position: 6.51
GC content: 64.57
Gene sequence:
>1380_bases ATGAGGAAACCGTTCTTGAGTCATCCTGCCATGAAGATCGCCGTGCTTGGCCTGGCCTTGTGCACGGCGATAACCGCCCT CGCCCAGGACAAACCGGCGGACTTTGCCAGCCAGACGCCGCTGAGCCTGAGCGGCCAAGGGCCGTGGTATCGCATCGAGT TGCCGCTTGCCGTCCAGCTGAATGCCCGGCAGACCGATCTGAGCGATGTACGCGTGTTCAATGCCGAGGGCCAGCCGCAG GCTTATTCGATCAGGCCGCGCCAGCCCGCCCCCGAACAGGAGCCGACGCCGATCGAGGTCAACTGGTTTGCCCTGTACAG CACACAGGAGGCAGGCGACACCGCACCGGTCATCCGTATCGAGCGCTCCAGCAACGGCAGCGTGATCGAGGTGCAGCCAC AAAGCGATATCGAAGCGGGCGAAGAAGTGCTGCGCGGCTGGCTGCTGGACACCAGCGCAATCAAGGCGCCACTGGAACAG CTGGTTATCGACTGGAGCACCGAGCGCGAGGGCTTCCAGAATTTCAGCATCGAAGCCAGTGATGACCTGCAACACTGGCG CAACTGGGGCGAGGGCCAGGTTGCACGGCTGTCGTTTGCCGACGAAGTGGTCGAACAGCGCGAAGTCGGCCTGCCCGGCC AGAGCGCCCGCTATCTGCGCCTGCTGTGGCGGTCCCCGCACAGTGCGCCGCTGCTGATCTCTGCGCACCTGCTGAGTGCC AGCAGCGGCACGCCGGCCTCGCCACTGACCTGGTCGCCACCGGTCCAAGGCAGCGTCGAAAGCCCCAACGAGTATGTCTG GCAACTGCCGACCGGCTTGCCGATAGGCCGCGTCAAGATCGACATTGCCCAGCCCAACAGCCTGGCACCGGCGACGCTCT ACGGCCGGCTCGATGCCGGACAGCCCTGGCAGCCGATCAGCAGCGGCCTGCTGTACCGGCTATCGCAGAACAACAGCGAT GTCCTGCAGGACCAGTTGCAATTGTCCGGGCGCATCGTTCAGCAGCTCAAGCTAGTGGTGGATGATCGCGGCGGCGGGCT GGGCAATGAAGCACCGCAGTTGAGTGTGGCCGTGCCTGCCACGGAAGTGGTGTTCCTGGCTCGCGGTGACGGACCATTCA CCCTGGCGATCGGCAACCCGAGCGTCAAGGCGGCGAATCTGTCGCTGGCCACGCTGATTCCTGACCTGAGTGCGGAAAAG CTCGCGACTCTCGGCACAGCGAGCCCGGCCACGGCAACCGTGGCCAACATGGCCGCAGCGCCGATCGCCGTGCCACAAGG TACTGACTTCAAACGCCTGGGGCTTTGGGCCGTACTGCTGCTTGGCGTGGTGTTTCTGGGCTGGATGACGTTCAGCACGC TGCGCGCTGCAAAACGCTGA
Upstream 100 bases:
>100_bases TATTGGTGGTGGGATATTTCGCACCGTTACCGCCGAAACACTCTGTCACAGAGGTCGGTGAAGAACCCGGCCCAGGCTCG ACTGCCGCACCGGAAACGCT
Downstream 100 bases:
>100_bases AACAGGCGGCCTGTCAGGCGTGCTTCGCCTGACATCTGAACTGAAACAGTCTTAAGCCAGTCTCATAGCAGTATTACGTC GCCACTCGCGTTAAACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRKPFLSHPAMKIAVLGLALCTAITALAQDKPADFASQTPLSLSGQGPWYRIELPLAVQLNARQTDLSDVRVFNAEGQPQ AYSIRPRQPAPEQEPTPIEVNWFALYSTQEAGDTAPVIRIERSSNGSVIEVQPQSDIEAGEEVLRGWLLDTSAIKAPLEQ LVIDWSTEREGFQNFSIEASDDLQHWRNWGEGQVARLSFADEVVEQREVGLPGQSARYLRLLWRSPHSAPLLISAHLLSA SSGTPASPLTWSPPVQGSVESPNEYVWQLPTGLPIGRVKIDIAQPNSLAPATLYGRLDAGQPWQPISSGLLYRLSQNNSD VLQDQLQLSGRIVQQLKLVVDDRGGGLGNEAPQLSVAVPATEVVFLARGDGPFTLAIGNPSVKAANLSLATLIPDLSAEK LATLGTASPATATVANMAAAPIAVPQGTDFKRLGLWAVLLLGVVFLGWMTFSTLRAAKR
Sequences:
>Translated_459_residues MRKPFLSHPAMKIAVLGLALCTAITALAQDKPADFASQTPLSLSGQGPWYRIELPLAVQLNARQTDLSDVRVFNAEGQPQ AYSIRPRQPAPEQEPTPIEVNWFALYSTQEAGDTAPVIRIERSSNGSVIEVQPQSDIEAGEEVLRGWLLDTSAIKAPLEQ LVIDWSTEREGFQNFSIEASDDLQHWRNWGEGQVARLSFADEVVEQREVGLPGQSARYLRLLWRSPHSAPLLISAHLLSA SSGTPASPLTWSPPVQGSVESPNEYVWQLPTGLPIGRVKIDIAQPNSLAPATLYGRLDAGQPWQPISSGLLYRLSQNNSD VLQDQLQLSGRIVQQLKLVVDDRGGGLGNEAPQLSVAVPATEVVFLARGDGPFTLAIGNPSVKAANLSLATLIPDLSAEK LATLGTASPATATVANMAAAPIAVPQGTDFKRLGLWAVLLLGVVFLGWMTFSTLRAAKR >Mature_459_residues MRKPFLSHPAMKIAVLGLALCTAITALAQDKPADFASQTPLSLSGQGPWYRIELPLAVQLNARQTDLSDVRVFNAEGQPQ AYSIRPRQPAPEQEPTPIEVNWFALYSTQEAGDTAPVIRIERSSNGSVIEVQPQSDIEAGEEVLRGWLLDTSAIKAPLEQ LVIDWSTEREGFQNFSIEASDDLQHWRNWGEGQVARLSFADEVVEQREVGLPGQSARYLRLLWRSPHSAPLLISAHLLSA SSGTPASPLTWSPPVQGSVESPNEYVWQLPTGLPIGRVKIDIAQPNSLAPATLYGRLDAGQPWQPISSGLLYRLSQNNSD VLQDQLQLSGRIVQQLKLVVDDRGGGLGNEAPQLSVAVPATEVVFLARGDGPFTLAIGNPSVKAANLSLATLIPDLSAEK LATLGTASPATATVANMAAAPIAVPQGTDFKRLGLWAVLLLGVVFLGWMTFSTLRAAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49500; Mature: 49500
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKPFLSHPAMKIAVLGLALCTAITALAQDKPADFASQTPLSLSGQGPWYRIELPLAVQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEEE NARQTDLSDVRVFNAEGQPQAYSIRPRQPAPEQEPTPIEVNWFALYSTQEAGDTAPVIRI CCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEE ERSSNGSVIEVQPQSDIEAGEEVLRGWLLDTSAIKAPLEQLVIDWSTEREGFQNFSIEAS EECCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCC DDLQHWRNWGEGQVARLSFADEVVEQREVGLPGQSARYLRLLWRSPHSAPLLISAHLLSA HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEC SSGTPASPLTWSPPVQGSVESPNEYVWQLPTGLPIGRVKIDIAQPNSLAPATLYGRLDAG CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCC QPWQPISSGLLYRLSQNNSDVLQDQLQLSGRIVQQLKLVVDDRGGGLGNEAPQLSVAVPA CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCC TEVVFLARGDGPFTLAIGNPSVKAANLSLATLIPDLSAEKLATLGTASPATATVANMAAA EEEEEEEECCCCEEEEECCCCCEEECEEHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHC PIAVPQGTDFKRLGLWAVLLLGVVFLGWMTFSTLRAAKR CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKPFLSHPAMKIAVLGLALCTAITALAQDKPADFASQTPLSLSGQGPWYRIELPLAVQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCEEEEEEEEEEEE NARQTDLSDVRVFNAEGQPQAYSIRPRQPAPEQEPTPIEVNWFALYSTQEAGDTAPVIRI CCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEE ERSSNGSVIEVQPQSDIEAGEEVLRGWLLDTSAIKAPLEQLVIDWSTEREGFQNFSIEAS EECCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCC DDLQHWRNWGEGQVARLSFADEVVEQREVGLPGQSARYLRLLWRSPHSAPLLISAHLLSA HHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEC SSGTPASPLTWSPPVQGSVESPNEYVWQLPTGLPIGRVKIDIAQPNSLAPATLYGRLDAG CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCC QPWQPISSGLLYRLSQNNSDVLQDQLQLSGRIVQQLKLVVDDRGGGLGNEAPQLSVAVPA CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEECCC TEVVFLARGDGPFTLAIGNPSVKAANLSLATLIPDLSAEKLATLGTASPATATVANMAAA EEEEEEEECCCCEEEEECCCCCEEECEEHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHC PIAVPQGTDFKRLGLWAVLLLGVVFLGWMTFSTLRAAKR CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA