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The map label for this gene is ydjR [C]

Identifier: 66043634

GI number: 66043634

Start: 389816

End: 390412

Strand: Reverse

Name: ydjR [C]

Synonym: Psyr_0365

Alternate gene names: 66043634

Gene position: 390412-389816 (Counterclockwise)

Preceding gene: 66043635

Following gene: 66043633

Centisome position: 6.41

GC content: 61.47

Gene sequence:

>597_bases
ATGAGCCAGACCCGCATTTTGCGCGCCGCAGACTACCCGCGCATGCCGTGGAAGAACGGCGGAGGCAGCACTGAAGAGAT
CGCTCGCGACGCAGGCCAGGACCTGGACGGTTTCGGCTGGCGGCTGTCGATTGCCGACATCGAAACCTCGGGCGGTTTTT
CGGTGTTCGCCGGTTATCAGCGCATCATCACCGTCCTGCAGGGCGCGGGCATGACGCTGGACGTGGATGGCCTCAGCAGT
CGCCCGCTGCTGCCATCGGACCCGTTTGCATTCAGCGGTGACAGTCAGGTCAATTGCACCTTGATGGACGGGCCGATTCG
CGATTTCAACCTGATCTACGCCCCACACCGCTACACTGCACGCTTGCACTGGATAGACGTGCGTCACCCGCAACGCCTGT
TCAGTTCAGCCAGTACTCTGGTGCTGTTCAGCATGGCCGAGCAAGTGGCGATCAGCGTCGACAGTCAGCCGTGGGAAATC
CTCGGCAAACACGATTGCGCTCAGGTGGACAACGCTGGCGGTCTGCTTGAAGTCGAACTGCAATCACCGCGCGCCAGCCG
TTGCTGCCTGATCGAGCTTACCGCCACAGGCCAGTAA

Upstream 100 bases:

>100_bases
TGCTGATTCGCCGCCGTACCTGGTCAGGTCGTCAGCCGGTCACCGCTGCGCGCCTGATCCATCCCGGCTCCCGCCATCGC
CTGGAAGGACGCTTTACCAA

Downstream 100 bases:

>100_bases
GCGCCTGTCTGCACACTTTATAAAAACAGCTTTGCGTTCAAGGACGACCATGACTCAAGTTCCGAACCGGGAAACGCCCA
GAGGCATTGCCATCCTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSQTRILRAADYPRMPWKNGGGSTEEIARDAGQDLDGFGWRLSIADIETSGGFSVFAGYQRIITVLQGAGMTLDVDGLSS
RPLLPSDPFAFSGDSQVNCTLMDGPIRDFNLIYAPHRYTARLHWIDVRHPQRLFSSASTLVLFSMAEQVAISVDSQPWEI
LGKHDCAQVDNAGGLLEVELQSPRASRCCLIELTATGQ

Sequences:

>Translated_198_residues
MSQTRILRAADYPRMPWKNGGGSTEEIARDAGQDLDGFGWRLSIADIETSGGFSVFAGYQRIITVLQGAGMTLDVDGLSS
RPLLPSDPFAFSGDSQVNCTLMDGPIRDFNLIYAPHRYTARLHWIDVRHPQRLFSSASTLVLFSMAEQVAISVDSQPWEI
LGKHDCAQVDNAGGLLEVELQSPRASRCCLIELTATGQ
>Mature_197_residues
SQTRILRAADYPRMPWKNGGGSTEEIARDAGQDLDGFGWRLSIADIETSGGFSVFAGYQRIITVLQGAGMTLDVDGLSSR
PLLPSDPFAFSGDSQVNCTLMDGPIRDFNLIYAPHRYTARLHWIDVRHPQRLFSSASTLVLFSMAEQVAISVDSQPWEIL
GKHDCAQVDNAGGLLEVELQSPRASRCCLIELTATGQ

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=121, Percent_Identity=36.3636363636364, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 21676; Mature: 21544

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTRILRAADYPRMPWKNGGGSTEEIARDAGQDLDGFGWRLSIADIETSGGFSVFAGYQ
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHH
RIITVLQGAGMTLDVDGLSSRPLLPSDPFAFSGDSQVNCTLMDGPIRDFNLIYAPHRYTA
HHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCEEEEECCCCEEE
RLHWIDVRHPQRLFSSASTLVLFSMAEQVAISVDSQPWEILGKHDCAQVDNAGGLLEVEL
EEEEEECCCHHHHHHCCCCEEEEEHHHHEEEEECCCCCEEECCCCCCCCCCCCCEEEEEE
QSPRASRCCLIELTATGQ
CCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
SQTRILRAADYPRMPWKNGGGSTEEIARDAGQDLDGFGWRLSIADIETSGGFSVFAGYQ
CCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHH
RIITVLQGAGMTLDVDGLSSRPLLPSDPFAFSGDSQVNCTLMDGPIRDFNLIYAPHRYTA
HHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCEEEEEEECCCCCCEEEEECCCCEEE
RLHWIDVRHPQRLFSSASTLVLFSMAEQVAISVDSQPWEILGKHDCAQVDNAGGLLEVEL
EEEEEECCCHHHHHHCCCCEEEEEHHHHEEEEECCCCCEEECCCCCCCCCCCCCEEEEEE
QSPRASRCCLIELTATGQ
CCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]