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The map label for this gene is soxA [H]

Identifier: 66043621

GI number: 66043621

Start: 376391

End: 377749

Strand: Reverse

Name: soxA [H]

Synonym: Psyr_0352

Alternate gene names: 66043621

Gene position: 377749-376391 (Counterclockwise)

Preceding gene: 66043622

Following gene: 66043620

Centisome position: 6.2

GC content: 61.22

Gene sequence:

>1359_bases
ATGGCGCGTAAAAAGATCCTCCTCAATGCGTTCAACATGAACTGCATCGGCCATATCAACCATGGCCTGTGGACCCATCC
ACGCGACACCTCGACACAATTCAACAGCCTGGAATACTGGACTGAGCTGGCAAAACTGCTGGAACGCGGGCTGTTCGACG
GCCTGTTCATCGCCGACATCGTGGGCGTGTATGACGTCTATCAGAACTCGGTGGACGTCACCCTCAAGGAGGCGATCCAG
TTACCGGTCAACGACCCGCTGCTGCTGGTCTCGGCCATGGCCGGGGTCACCAGACACCTGGGCTTCGGCCTGACCGCCAA
CCTGACCTACGACGCGCCCTATCTGTTCGCCAGGCGCATGTCGACACTGGATCACCTGAGCCGTGGCCGGGTGGGCTGGA
ACATCGTCACCGGTTACCTCGACAGCGCAGCGCGGGCCATGGGCCTCAGCGAGCAGAACGAACATGACCGCCGTTACGAT
CAGGCCGACGAGTACCTGGAGGTGCTGTACAAGCTTTGGGAAGGCAGCTGGGAAGACGATGCCGTGATCAACGACCGCGA
GCAACGCGTCTACGCCCAGCCAGGCAAGGTCCACAAGGTCCGGCATCAGGGCGAGTTCTATCAGGTCGAGGGTTATCACC
TCTGCGAACCGTCGCCGCAACGCACGCCGGTGCTGTTTCAGGCTGGCAGCTCGGAGCGCGGCCTGCAGTTTGCCGGACAG
AACGCCGAGTGTGTGTTCATCAGCGGTCAGAACAAGGCCGCGACCCGCGAGCAGGTCGACAAGGTGCGCGCCAGTGCCGT
GCAGGCCGGGCGCAACCCGGAGGACATCAAGGTGTTCATGGGCCTGAACGTGATCGTCGCGGCCACCGAAGCACTGGCTC
GGGAGAAACACGCCGAATACCGCCGCCATGCCAGCGCCGAAGCCGGCGTGGCGCACTTCGCTGCGTCTACGGGCATCGAT
TTTTCTCAGTACGAACTGGACGAACCCATTCAGTACGTGAAAAACAACGCCATTCAGTCCGCGACCAAAAACCTGAAAAA
CAACGACTGGACGCGCCAGAAACTGCTCGACCAGCACGCCTTGGGCGGCCGTTACATCACCTTGATCGGCTCGCCCCGAC
AGGTCGCCGACGAGCTCGAATCGTGGATCGAGGAAACCGGCCTGGACGGCTTCAACCTGACCCGCATCGTCACCCCGGAA
AGTTACGAGGACTTCATTGACCTGGTGATCCCGGAGCTGCAACGCCGGGGCTCATACAAAACCGCTTACCAGGAGGGCAG
CTTGCGCAAAAAACTGTTTCCGCAAGGCACCGACCGCTTGCCGGAGCGGCATGCCGGGGCTGCACACCGACATATTTGA

Upstream 100 bases:

>100_bases
CGCGCGTGCATACGCTGCATGACCCGGTGCGCTGGAAGTTTCACGCCATCGGCAATTACTACCTCAATGAGACTAATCCG
CCCCTGCGGGGAACGATCTG

Downstream 100 bases:

>100_bases
TGAAGACATGCGCCCCACGCCGAAGCGCTTGGCGTTGTGCACAGGCTTTGTGGGAGCGATGCGCTGCGGGGGCGGCACAC
CGCCGTATTTGATGACGACA

Product: DszA family monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MARKKILLNAFNMNCIGHINHGLWTHPRDTSTQFNSLEYWTELAKLLERGLFDGLFIADIVGVYDVYQNSVDVTLKEAIQ
LPVNDPLLLVSAMAGVTRHLGFGLTANLTYDAPYLFARRMSTLDHLSRGRVGWNIVTGYLDSAARAMGLSEQNEHDRRYD
QADEYLEVLYKLWEGSWEDDAVINDREQRVYAQPGKVHKVRHQGEFYQVEGYHLCEPSPQRTPVLFQAGSSERGLQFAGQ
NAECVFISGQNKAATREQVDKVRASAVQAGRNPEDIKVFMGLNVIVAATEALAREKHAEYRRHASAEAGVAHFAASTGID
FSQYELDEPIQYVKNNAIQSATKNLKNNDWTRQKLLDQHALGGRYITLIGSPRQVADELESWIEETGLDGFNLTRIVTPE
SYEDFIDLVIPELQRRGSYKTAYQEGSLRKKLFPQGTDRLPERHAGAAHRHI

Sequences:

>Translated_452_residues
MARKKILLNAFNMNCIGHINHGLWTHPRDTSTQFNSLEYWTELAKLLERGLFDGLFIADIVGVYDVYQNSVDVTLKEAIQ
LPVNDPLLLVSAMAGVTRHLGFGLTANLTYDAPYLFARRMSTLDHLSRGRVGWNIVTGYLDSAARAMGLSEQNEHDRRYD
QADEYLEVLYKLWEGSWEDDAVINDREQRVYAQPGKVHKVRHQGEFYQVEGYHLCEPSPQRTPVLFQAGSSERGLQFAGQ
NAECVFISGQNKAATREQVDKVRASAVQAGRNPEDIKVFMGLNVIVAATEALAREKHAEYRRHASAEAGVAHFAASTGID
FSQYELDEPIQYVKNNAIQSATKNLKNNDWTRQKLLDQHALGGRYITLIGSPRQVADELESWIEETGLDGFNLTRIVTPE
SYEDFIDLVIPELQRRGSYKTAYQEGSLRKKLFPQGTDRLPERHAGAAHRHI
>Mature_451_residues
ARKKILLNAFNMNCIGHINHGLWTHPRDTSTQFNSLEYWTELAKLLERGLFDGLFIADIVGVYDVYQNSVDVTLKEAIQL
PVNDPLLLVSAMAGVTRHLGFGLTANLTYDAPYLFARRMSTLDHLSRGRVGWNIVTGYLDSAARAMGLSEQNEHDRRYDQ
ADEYLEVLYKLWEGSWEDDAVINDREQRVYAQPGKVHKVRHQGEFYQVEGYHLCEPSPQRTPVLFQAGSSERGLQFAGQN
AECVFISGQNKAATREQVDKVRASAVQAGRNPEDIKVFMGLNVIVAATEALAREKHAEYRRHASAEAGVAHFAASTGIDF
SQYELDEPIQYVKNNAIQSATKNLKNNDWTRQKLLDQHALGGRYITLIGSPRQVADELESWIEETGLDGFNLTRIVTPES
YEDFIDLVIPELQRRGSYKTAYQEGSLRKKLFPQGTDRLPERHAGAAHRHI

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. This enzyme metabolizes DBT-sulfone (DBTO2 or DBT 5,5-dioxide) to 2- hydroxybiphenyl (2-HBP) [H]

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1787247, Length=343, Percent_Identity=25.3644314868805, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787166, Length=206, Percent_Identity=27.6699029126214, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR016215 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 51079; Mature: 50948

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKILLNAFNMNCIGHINHGLWTHPRDTSTQFNSLEYWTELAKLLERGLFDGLFIADI
CCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGVYDVYQNSVDVTLKEAIQLPVNDPLLLVSAMAGVTRHLGFGLTANLTYDAPYLFARRM
HHHHHHHHCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
STLDHLSRGRVGWNIVTGYLDSAARAMGLSEQNEHDRRYDQADEYLEVLYKLWEGSWEDD
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
AVINDREQRVYAQPGKVHKVRHQGEFYQVEGYHLCEPSPQRTPVLFQAGSSERGLQFAGQ
CCCCCHHHHEECCCCCEEEHHCCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCEECCC
NAECVFISGQNKAATREQVDKVRASAVQAGRNPEDIKVFMGLNVIVAATEALAREKHAEY
CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
RRHASAEAGVAHFAASTGIDFSQYELDEPIQYVKNNAIQSATKNLKNNDWTRQKLLDQHA
HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
LGGRYITLIGSPRQVADELESWIEETGLDGFNLTRIVTPESYEDFIDLVIPELQRRGSYK
CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC
TAYQEGSLRKKLFPQGTDRLPERHAGAAHRHI
HHHHCCCHHHHHCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
ARKKILLNAFNMNCIGHINHGLWTHPRDTSTQFNSLEYWTELAKLLERGLFDGLFIADI
CCCEEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGVYDVYQNSVDVTLKEAIQLPVNDPLLLVSAMAGVTRHLGFGLTANLTYDAPYLFARRM
HHHHHHHHCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
STLDHLSRGRVGWNIVTGYLDSAARAMGLSEQNEHDRRYDQADEYLEVLYKLWEGSWEDD
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
AVINDREQRVYAQPGKVHKVRHQGEFYQVEGYHLCEPSPQRTPVLFQAGSSERGLQFAGQ
CCCCCHHHHEECCCCCEEEHHCCCCEEEECCEEECCCCCCCCCEEEECCCCCCCCEECCC
NAECVFISGQNKAATREQVDKVRASAVQAGRNPEDIKVFMGLNVIVAATEALAREKHAEY
CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
RRHASAEAGVAHFAASTGIDFSQYELDEPIQYVKNNAIQSATKNLKNNDWTRQKLLDQHA
HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
LGGRYITLIGSPRQVADELESWIEETGLDGFNLTRIVTPESYEDFIDLVIPELQRRGSYK
CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCC
TAYQEGSLRKKLFPQGTDRLPERHAGAAHRHI
HHHHCCCHHHHHCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]