| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is metQ [H]
Identifier: 66043597
GI number: 66043597
Start: 347041
End: 347823
Strand: Direct
Name: metQ [H]
Synonym: Psyr_0328
Alternate gene names: 66043597
Gene position: 347041-347823 (Clockwise)
Preceding gene: 66043596
Following gene: 66043599
Centisome position: 5.7
GC content: 56.19
Gene sequence:
>783_bases ATGAAAAAGACGTTTTTGCTGACCGCTCTGGCGGCTGTGTTCTCCATTGGCCTGGCTCACGCAGGTGAAAAGCTGGTCGT CGGCGCAACGCCCGTACCGCATGCGGAAATCCTCAAACTGATCCAGCCGACGCTGGCCAAGGAAGGTGTGGACCTGGAAA TCAAGGTCTTCACTGACTACGTACAGCCCAACGTCCAGTTGAGCGAGAAGCGTCTGGATGCCAACTACTTCCAGACCAAG CCTTACCTGGATGGCTTCAACAAGGGTAAAGGCACCAACCTGGTAACCGGCGTTGGCGTACACGTCGAACCGTTCGGCGG CTACTCGAAAAAGTACAAGAGCGTGAAAGATCTGCCTGAAGGCGCAACCATTGCCATTCCGAACGAAGGCAGCAACGCCG GGCGTGCGCTGATCCTGTTGGACAAGAACGGCCTGATCACCCTGAAGGATCCGAAAAACGCACTGTCCACGCCGAAAGAC ATCGCCAGCAACCCGAAGAATTTCAAGTTCCGCGAACTGGAGTCGGCTGTACTGCCACGCGCCTTGAGCCAGGTTGACCT CGCGCTGATCAATACCAACTACGCGCTGGAAGCCAAGCTCAATCCGAAGAAAGACGCGCTGATCATCGAGGGTTCGGATT CGCCGTACGTGAACTTCCTCGTGACCCGCGAAGACAACGCCCACACCGACGCCATCGAGAAACTGTCGAAAGCGCTGACC AGCCAGGAAGTGAAAGACTTCATCAACAAGAAGTACGACGGCGCGGTACTGCCTGCGTTCTGA
Upstream 100 bases:
>100_bases GTCAGCATGATGTCGCAGGGTTCGGATAGCTGTGGCAAATCATTGAATAATAAGGTGTCATTTTCTGGATGACGCTCTCG GATTTCGTTAAGGACATTGC
Downstream 100 bases:
>100_bases CCCACTGACTCTCGTTCCTCCAACTATCATGCGACGCTCCGCGTCGCATGCCGTTCTGAACGCTCCGCGTCCGATCGTGA ATGTGCGACGCAGCGCAGAT
Product: NLPA lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MKKTFLLTALAAVFSIGLAHAGEKLVVGATPVPHAEILKLIQPTLAKEGVDLEIKVFTDYVQPNVQLSEKRLDANYFQTK PYLDGFNKGKGTNLVTGVGVHVEPFGGYSKKYKSVKDLPEGATIAIPNEGSNAGRALILLDKNGLITLKDPKNALSTPKD IASNPKNFKFRELESAVLPRALSQVDLALINTNYALEAKLNPKKDALIIEGSDSPYVNFLVTREDNAHTDAIEKLSKALT SQEVKDFINKKYDGAVLPAF
Sequences:
>Translated_260_residues MKKTFLLTALAAVFSIGLAHAGEKLVVGATPVPHAEILKLIQPTLAKEGVDLEIKVFTDYVQPNVQLSEKRLDANYFQTK PYLDGFNKGKGTNLVTGVGVHVEPFGGYSKKYKSVKDLPEGATIAIPNEGSNAGRALILLDKNGLITLKDPKNALSTPKD IASNPKNFKFRELESAVLPRALSQVDLALINTNYALEAKLNPKKDALIIEGSDSPYVNFLVTREDNAHTDAIEKLSKALT SQEVKDFINKKYDGAVLPAF >Mature_260_residues MKKTFLLTALAAVFSIGLAHAGEKLVVGATPVPHAEILKLIQPTLAKEGVDLEIKVFTDYVQPNVQLSEKRLDANYFQTK PYLDGFNKGKGTNLVTGVGVHVEPFGGYSKKYKSVKDLPEGATIAIPNEGSNAGRALILLDKNGLITLKDPKNALSTPKD IASNPKNFKFRELESAVLPRALSQVDLALINTNYALEAKLNPKKDALIIEGSDSPYVNFLVTREDNAHTDAIEKLSKALT SQEVKDFINKKYDGAVLPAF
Specific function: Part of the ABC transporter complex metNIQ involved in methionine import. Binds the methionine and transfers it to the membrane-bound permease. It has also been shown to be involved in methionine sulfoxide transport (Probable) [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=216, Percent_Identity=46.2962962962963, Blast_Score=185, Evalue=2e-48, Organism=Escherichia coli, GI1790093, Length=216, Percent_Identity=42.1296296296296, Blast_Score=167, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 28262; Mature: 28262
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFLLTALAAVFSIGLAHAGEKLVVGATPVPHAEILKLIQPTLAKEGVDLEIKVFTDY CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEC VQPNVQLSEKRLDANYFQTKPYLDGFNKGKGTNLVTGVGVHVEPFGGYSKKYKSVKDLPE CCCCCEEHHHHCCCCCEECCCCCCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHCCCC GATIAIPNEGSNAGRALILLDKNGLITLKDPKNALSTPKDIASNPKNFKFRELESAVLPR CCEEEECCCCCCCCCEEEEECCCCEEEECCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHH ALSQVDLALINTNYALEAKLNPKKDALIIEGSDSPYVNFLVTREDNAHTDAIEKLSKALT HHHHHEEEEEECCEEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHH SQEVKDFINKKYDGAVLPAF HHHHHHHHCCCCCCEECCCC >Mature Secondary Structure MKKTFLLTALAAVFSIGLAHAGEKLVVGATPVPHAEILKLIQPTLAKEGVDLEIKVFTDY CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEC VQPNVQLSEKRLDANYFQTKPYLDGFNKGKGTNLVTGVGVHVEPFGGYSKKYKSVKDLPE CCCCCEEHHHHCCCCCEECCCCCCCCCCCCCCEEEEECCEEEECCCCHHHHHHHHHCCCC GATIAIPNEGSNAGRALILLDKNGLITLKDPKNALSTPKDIASNPKNFKFRELESAVLPR CCEEEECCCCCCCCCEEEEECCCCEEEECCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHH ALSQVDLALINTNYALEAKLNPKKDALIIEGSDSPYVNFLVTREDNAHTDAIEKLSKALT HHHHHEEEEEECCEEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHH SQEVKDFINKKYDGAVLPAF HHHHHHHHCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]