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The map label for this gene is elbB [H]

Identifier: 66043560

GI number: 66043560

Start: 308664

End: 309332

Strand: Reverse

Name: elbB [H]

Synonym: Psyr_0290

Alternate gene names: 66043560

Gene position: 309332-308664 (Counterclockwise)

Preceding gene: 66043561

Following gene: 66043559

Centisome position: 5.08

GC content: 61.58

Gene sequence:

>669_bases
ATGCAGAAAAAAGTGGCTGTAATCCTCTCCGGCTGTGGCGTCTACGACGGTGCCGAGATTCACGAAAGCGTCCTCACCCT
GCTGCGTCTGGATCAGCGCGGTGCGCAGGTTCAGTGCTTTGCGCCCGACATCAATCAGCATCATGTGGTCAATCACCTGA
CCGGTGAGGAAATGCCCGAGTCGCGCAATGTGCTGGTCGAGTCTGCGCGCATTGCACGCGGCGAAGTGAAGGACATCCGC
GAAGCAAATGCCGAGGACTTTGACGCCCTGATCATCCCGGGCGGTTTTGGCTCGGCAAAGAATCTTTCCGACCTTGCCCT
GCAAGGCCCGGCCTGCCAGGTCGAAGCCGGACTGCTGGAGCTGGCCGAGGCGTTTGCCGAAGCCGGCAAACCGGTCGGGC
TGATCTGCATCACCCCGGCACTCGCGGCCAAGATCTATGGCCCCGGCGTTACCTGCACCATCGGCAACGACCCTGAAACC
GCTGCGGCCATCACCAAAATGGGCGGCAGCCATGCGGAATGCGCCGTCGATGACATCGTCGAGGACGAAGCCCGAAAACT
GGTCAGCACACCTGCCTACATGGTCGCCAAGAGCATCAGCGAGGCGGCCTCGGGCATCAACAAGCTGGTTGACCGCGTGC
TGGAACTGACCCACGAGGGCGATGCCTGA

Upstream 100 bases:

>100_bases
CCAGCAATGCCTGAACTGAACACTCGGCCCGTTAAGCGATCAACTGAACAGACAAATTAAAACAAGCCTCAGGTTGATCG
AGCAAAAGGAGCCGAAATCG

Downstream 100 bases:

>100_bases
TCGTCGCCCTGCCTGCCCAAGGCACCGCCCGTCAGGCGGGCGGTGTTTTGCAGGCCGGCCATGGTGATTCATCCAGGCTT
TATACTGTACTGTATGCATG

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MQKKVAVILSGCGVYDGAEIHESVLTLLRLDQRGAQVQCFAPDINQHHVVNHLTGEEMPESRNVLVESARIARGEVKDIR
EANAEDFDALIIPGGFGSAKNLSDLALQGPACQVEAGLLELAEAFAEAGKPVGLICITPALAAKIYGPGVTCTIGNDPET
AAAITKMGGSHAECAVDDIVEDEARKLVSTPAYMVAKSISEAASGINKLVDRVLELTHEGDA

Sequences:

>Translated_222_residues
MQKKVAVILSGCGVYDGAEIHESVLTLLRLDQRGAQVQCFAPDINQHHVVNHLTGEEMPESRNVLVESARIARGEVKDIR
EANAEDFDALIIPGGFGSAKNLSDLALQGPACQVEAGLLELAEAFAEAGKPVGLICITPALAAKIYGPGVTCTIGNDPET
AAAITKMGGSHAECAVDDIVEDEARKLVSTPAYMVAKSISEAASGINKLVDRVLELTHEGDA
>Mature_222_residues
MQKKVAVILSGCGVYDGAEIHESVLTLLRLDQRGAQVQCFAPDINQHHVVNHLTGEEMPESRNVLVESARIARGEVKDIR
EANAEDFDALIIPGGFGSAKNLSDLALQGPACQVEAGLLELAEAFAEAGKPVGLICITPALAAKIYGPGVTCTIGNDPET
AAAITKMGGSHAECAVDDIVEDEARKLVSTPAYMVAKSISEAASGINKLVDRVLELTHEGDA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=227, Percent_Identity=46.6960352422907, Blast_Score=191, Evalue=6e-49,
Organism=Homo sapiens, GI296531408, Length=227, Percent_Identity=41.8502202643172, Blast_Score=154, Evalue=7e-38,
Organism=Escherichia coli, GI87082228, Length=214, Percent_Identity=58.411214953271, Blast_Score=256, Evalue=8e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23299; Mature: 23299

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKVAVILSGCGVYDGAEIHESVLTLLRLDQRGAQVQCFAPDINQHHVVNHLTGEEMPE
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCC
SRNVLVESARIARGEVKDIREANAEDFDALIIPGGFGSAKNLSDLALQGPACQVEAGLLE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHH
LAEAFAEAGKPVGLICITPALAAKIYGPGVTCTIGNDPETAAAITKMGGSHAECAVDDIV
HHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHH
EDEARKLVSTPAYMVAKSISEAASGINKLVDRVLELTHEGDA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKKVAVILSGCGVYDGAEIHESVLTLLRLDQRGAQVQCFAPDINQHHVVNHLTGEEMPE
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCCCCCC
SRNVLVESARIARGEVKDIREANAEDFDALIIPGGFGSAKNLSDLALQGPACQVEAGLLE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHH
LAEAFAEAGKPVGLICITPALAAKIYGPGVTCTIGNDPETAAAITKMGGSHAECAVDDIV
HHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHH
EDEARKLVSTPAYMVAKSISEAASGINKLVDRVLELTHEGDA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]