Click here to switch to the map view.

The map label for this gene is 66043549

Identifier: 66043549

GI number: 66043549

Start: 296608

End: 297324

Strand: Direct

Name: 66043549

Synonym: Psyr_0279

Alternate gene names: NA

Gene position: 296608-297324 (Clockwise)

Preceding gene: 66043548

Following gene: 66043551

Centisome position: 4.87

GC content: 59.97

Gene sequence:

>717_bases
ATGAAGCCGTTCGCCCCACGCTATCTGCTGCTTGTCGCATTTTCCATCTTGCTGGGTGCCTGCCAGAGTGCGCCCACTGT
CGAGACGCCTGCCTCCGAGGCCCAGCCTGATGCATTCGCTCAGCTTGAGCAGAACATCGCCGGCAATGAGCTGGCAACCG
CCGAGGACCAATTGGCGGCGTTGCAGGCTGCCAATCCTGCCGACATCCGTCTGGAGCCTTTTCAGCGTCGTCTGGCCGAA
GCCTATCTGAGCCGCAGTCAGATAAGCCTGCAGAAGGGCGACATGAACGCGGCGGCCTCTGCGCTGAGCCGTGCACGCGC
CCTGATGCCCAAGGCACCGGCGCTGACCAGTGGCGTCAACGGCGCCATTGCCCATGCGCGCAAGGCCGAGCTGGAAAAAG
CCGAAGCGGATTTGAAAGCGGCCGAAGCCAGAAGGGTTGCCAGACTGATTGACCCGTCGGCAGAAAGCACGACGATTGAG
CTCAAGATCGGCGATATGCCTGCATTGCGTCGTCAACTCGACGATATCGCAGCCGATACCGTAGCGTTCAACTGTGAAGT
GCTGATGGTGGTGCCGCGTACCGAAGACTATCCGTGGCTGGCTACGTTGCTGACCAAGCGGGTGGTCAAGGCCAATCCGG
ATTTCGAACTGCAATTGCGTCGACAGATCGAGCGCAATGAAAAAGCTCACATCATCCTCACGCCAGCGAAGTCCTGA

Upstream 100 bases:

>100_bases
TAGTGGTATCCGCTGCGGCGTTGTTCTTGCTCAGCTTTGTTCTACCCAGGCGAGCGGTGTAGACTTGCTCGTTTTTTGCG
CAAACTAGAGAATCGCAGGA

Downstream 100 bases:

>100_bases
GTCGATCCTTGAAGGCGGACGCAGAGCGTCCAGAACTGCATTCCCACGCGGAGCGTGAGGAACGACAAGTGTTCGGGAGT
ATAAGCGGGCGGAGAGAGCG

Product: putative lipoprotein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKPFAPRYLLLVAFSILLGACQSAPTVETPASEAQPDAFAQLEQNIAGNELATAEDQLAALQAANPADIRLEPFQRRLAE
AYLSRSQISLQKGDMNAAASALSRARALMPKAPALTSGVNGAIAHARKAELEKAEADLKAAEARRVARLIDPSAESTTIE
LKIGDMPALRRQLDDIAADTVAFNCEVLMVVPRTEDYPWLATLLTKRVVKANPDFELQLRRQIERNEKAHIILTPAKS

Sequences:

>Translated_238_residues
MKPFAPRYLLLVAFSILLGACQSAPTVETPASEAQPDAFAQLEQNIAGNELATAEDQLAALQAANPADIRLEPFQRRLAE
AYLSRSQISLQKGDMNAAASALSRARALMPKAPALTSGVNGAIAHARKAELEKAEADLKAAEARRVARLIDPSAESTTIE
LKIGDMPALRRQLDDIAADTVAFNCEVLMVVPRTEDYPWLATLLTKRVVKANPDFELQLRRQIERNEKAHIILTPAKS
>Mature_238_residues
MKPFAPRYLLLVAFSILLGACQSAPTVETPASEAQPDAFAQLEQNIAGNELATAEDQLAALQAANPADIRLEPFQRRLAE
AYLSRSQISLQKGDMNAAASALSRARALMPKAPALTSGVNGAIAHARKAELEKAEADLKAAEARRVARLIDPSAESTTIE
LKIGDMPALRRQLDDIAADTVAFNCEVLMVVPRTEDYPWLATLLTKRVVKANPDFELQLRRQIERNEKAHIILTPAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25876; Mature: 25876

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFAPRYLLLVAFSILLGACQSAPTVETPASEAQPDAFAQLEQNIAGNELATAEDQLAA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
LQAANPADIRLEPFQRRLAEAYLSRSQISLQKGDMNAAASALSRARALMPKAPALTSGVN
HHCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCC
GAIAHARKAELEKAEADLKAAEARRVARLIDPSAESTTIELKIGDMPALRRQLDDIAADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
VAFNCEVLMVVPRTEDYPWLATLLTKRVVKANPDFELQLRRQIERNEKAHIILTPAKS
EEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MKPFAPRYLLLVAFSILLGACQSAPTVETPASEAQPDAFAQLEQNIAGNELATAEDQLAA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH
LQAANPADIRLEPFQRRLAEAYLSRSQISLQKGDMNAAASALSRARALMPKAPALTSGVN
HHCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCC
GAIAHARKAELEKAEADLKAAEARRVARLIDPSAESTTIELKIGDMPALRRQLDDIAADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
VAFNCEVLMVVPRTEDYPWLATLLTKRVVKANPDFELQLRRQIERNEKAHIILTPAKS
EEECCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA