| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is znuB [H]
Identifier: 66043548
GI number: 66043548
Start: 295781
End: 296569
Strand: Direct
Name: znuB [H]
Synonym: Psyr_0278
Alternate gene names: 66043548
Gene position: 295781-296569 (Clockwise)
Preceding gene: 66043547
Following gene: 66043549
Centisome position: 4.85
GC content: 62.99
Gene sequence:
>789_bases ATGGCTGATTTTCTACTGTATGCCTTGCTCGCAGGCGTTGCGCTGGCCGTGGTCGCTGGCCCGCTGGGATCATTCGTGGT CTGGCGGCGCATGGCGTATTTCGGCGACACACTTTCCCACGCCGCGCTGCTCGGCGTCGCGCTGGGCTTCCTGCTGGACA TCAGCCCGACCATCGCGGTGACGGTCGGCTGCCTGCTGCTGGCGGTGTTGCTGGTCACGTTGCAACAGCGCCAACCGCTG GCGTCGGACACGCTGCTGGGGATTCTCGCGCCAAGCACTTTGTCGCTGGGGCTGGTGGTGCTCAGTTTCATGCACGAAGT GCGCATCGACCTGATGGCCTACCTGTTCGGCGATCTGCTGGCCATCAGCCCGGCTGATCTGGGCTGGATTCTGGGCGGCA GCACGTTGGTGCTGGTGCTGATCGTCGCGCTGTGGCGCCCACTGCTGGCAATGACCGTGCATGAAGAGCTGGCGCGGGTC GAAGGCCTGCCGGTTGCTACACTGCGCATGACCTTGATGCTGCTGATCGCCGTGGTGATCGCGGTTGCGATGAAAATCGT CGGTGTTCTGCTGATTACGTCGCTGTTGATCATCCCGGCAGCTGCGGCACAGCGTCACGCCCGTTCGCCGGAGCAAATGG CGCTGGGCGCGAGCCTGTTGGGCGTGATAGCCGTGTGTGCCGGGCTATCATTGTCCTGGTTCAAGGACACTCCTGCCGGA CCGTCTATAGTGGTATCCGCTGCGGCGTTGTTCTTGCTCAGCTTTGTTCTACCCAGGCGAGCGGTGTAG
Upstream 100 bases:
>100_bases TATCACCACCATCACGATCACGCCCACGATCTGCATGGCGCGGTGGTGAATGACGCTGCACCCCTCTCTCACACTCACGT TCACGGAGACAGCTGTAAGC
Downstream 100 bases:
>100_bases ACTTGCTCGTTTTTTGCGCAAACTAGAGAATCGCAGGAATGAAGCCGTTCGCCCCACGCTATCTGCTGCTTGTCGCATTT TCCATCTTGCTGGGTGCCTG
Product: hypothetical protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MADFLLYALLAGVALAVVAGPLGSFVVWRRMAYFGDTLSHAALLGVALGFLLDISPTIAVTVGCLLLAVLLVTLQQRQPL ASDTLLGILAPSTLSLGLVVLSFMHEVRIDLMAYLFGDLLAISPADLGWILGGSTLVLVLIVALWRPLLAMTVHEELARV EGLPVATLRMTLMLLIAVVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMALGASLLGVIAVCAGLSLSWFKDTPAG PSIVVSAAALFLLSFVLPRRAV
Sequences:
>Translated_262_residues MADFLLYALLAGVALAVVAGPLGSFVVWRRMAYFGDTLSHAALLGVALGFLLDISPTIAVTVGCLLLAVLLVTLQQRQPL ASDTLLGILAPSTLSLGLVVLSFMHEVRIDLMAYLFGDLLAISPADLGWILGGSTLVLVLIVALWRPLLAMTVHEELARV EGLPVATLRMTLMLLIAVVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMALGASLLGVIAVCAGLSLSWFKDTPAG PSIVVSAAALFLLSFVLPRRAV >Mature_261_residues ADFLLYALLAGVALAVVAGPLGSFVVWRRMAYFGDTLSHAALLGVALGFLLDISPTIAVTVGCLLLAVLLVTLQQRQPLA SDTLLGILAPSTLSLGLVVLSFMHEVRIDLMAYLFGDLLAISPADLGWILGGSTLVLVLIVALWRPLLAMTVHEELARVE GLPVATLRMTLMLLIAVVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMALGASLLGVIAVCAGLSLSWFKDTPAGP SIVVSAAALFLLSFVLPRRAV
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=254, Percent_Identity=58.6614173228346, Blast_Score=264, Evalue=3e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 27460; Mature: 27329
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFLLYALLAGVALAVVAGPLGSFVVWRRMAYFGDTLSHAALLGVALGFLLDISPTIAV CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TVGCLLLAVLLVTLQQRQPLASDTLLGILAPSTLSLGLVVLSFMHEVRIDLMAYLFGDLL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISPADLGWILGGSTLVLVLIVALWRPLLAMTVHEELARVEGLPVATLRMTLMLLIAVVI HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMALGASLLGVIAVCAGLSLSWFKDTPAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC PSIVVSAAALFLLSFVLPRRAV HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ADFLLYALLAGVALAVVAGPLGSFVVWRRMAYFGDTLSHAALLGVALGFLLDISPTIAV HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TVGCLLLAVLLVTLQQRQPLASDTLLGILAPSTLSLGLVVLSFMHEVRIDLMAYLFGDLL HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AISPADLGWILGGSTLVLVLIVALWRPLLAMTVHEELARVEGLPVATLRMTLMLLIAVVI HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMALGASLLGVIAVCAGLSLSWFKDTPAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC PSIVVSAAALFLLSFVLPRRAV HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2842314; 7984428; 9680209 [H]