| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yeiL [C]
Identifier: 66043513
GI number: 66043513
Start: 255795
End: 256505
Strand: Direct
Name: yeiL [C]
Synonym: Psyr_0243
Alternate gene names: 66043513
Gene position: 255795-256505 (Clockwise)
Preceding gene: 66043511
Following gene: 66043514
Centisome position: 4.2
GC content: 64.56
Gene sequence:
>711_bases ATGACAAATGGAGTGTCGTGGCGGTCACGATTGCTATCCGATTACTGGTTTTCCCATCTGCCTGCCGATCTGCAGGACAG CCTGCTGGACGCTGCCCGCCAGCGACGCAAGACGCCCGGCAGGCGGCTGTTCGAGAAGGGCGATCTGCCCTGCGGTGTTT ATGTGCTGCTGGAGGGCAGCGTGCGGATCGGCGCCGCCCACGAGCAGCGGCTGCTGACGAACGTGGAACCTGCAAGCGCG CCGTGCTGGTTTGGCGAAGTCTCGCTGTTTGACGGGCTGCCGCGCCGTTTCGAAGTCTGCTCGCTTGAGCAGAGCATCTT CCTGCACATCCCCCAGCCATTCCTGGCCCGGCTGCTCGACAGGCACTCCGAGTACTGGCGCTGGTTTGCCGCACTGCTCA GTCAGAAGGTCGGCTTGCCACTGCAGAGCCCCGAGAAAATGCGTCAGCTGCCGCCGCGGGCGCGGGTCGCCTGGCGGCTG TTGATGCTCAGCGAGGGGTATGGCCCGTTGAGCCACGCACGCCGCCTGATTGCGCTGGATGACATTCAGGCGGCGGAGCG TCTTGCGCTTGCCTCGCCGGCCTTGCTGGAAGTACTCCAGGACCTGCATGAGCGCAGGATCGTGCGCCTGGGAGAGGGAC ACCTGGAGGTGTTCGATGTGGACAGGCTGCGCAGGGTGGCGAACTTTTCCAGAGCCAGGGCTGTGTGCTGA
Upstream 100 bases:
>100_bases GATCGACAAGGGTTTTCATTATTATTCCTGCCTGAGACGATGGCCGGCTTGAGCCTGATTTCTTGTACAACATGCATGGC TGAAAGAGAAGGGAGCAAAA
Downstream 100 bases:
>100_bases TCACCGGTCATGATCGGGCCTGGACACATCCGGTAACGGCTCCGCTGTCGCTTCGATTGAGATAGCAAATGGGATTCACT ACCATTTCGCCTCCTTTGCG
Product: cyclic nucleotide-binding
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Regulatory Protein; Transcription Regulator Protein; GntR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTNGVSWRSRLLSDYWFSHLPADLQDSLLDAARQRRKTPGRRLFEKGDLPCGVYVLLEGSVRIGAAHEQRLLTNVEPASA PCWFGEVSLFDGLPRRFEVCSLEQSIFLHIPQPFLARLLDRHSEYWRWFAALLSQKVGLPLQSPEKMRQLPPRARVAWRL LMLSEGYGPLSHARRLIALDDIQAAERLALASPALLEVLQDLHERRIVRLGEGHLEVFDVDRLRRVANFSRARAVC
Sequences:
>Translated_236_residues MTNGVSWRSRLLSDYWFSHLPADLQDSLLDAARQRRKTPGRRLFEKGDLPCGVYVLLEGSVRIGAAHEQRLLTNVEPASA PCWFGEVSLFDGLPRRFEVCSLEQSIFLHIPQPFLARLLDRHSEYWRWFAALLSQKVGLPLQSPEKMRQLPPRARVAWRL LMLSEGYGPLSHARRLIALDDIQAAERLALASPALLEVLQDLHERRIVRLGEGHLEVFDVDRLRRVANFSRARAVC >Mature_235_residues TNGVSWRSRLLSDYWFSHLPADLQDSLLDAARQRRKTPGRRLFEKGDLPCGVYVLLEGSVRIGAAHEQRLLTNVEPASAP CWFGEVSLFDGLPRRFEVCSLEQSIFLHIPQPFLARLLDRHSEYWRWFAALLSQKVGLPLQSPEKMRQLPPRARVAWRLL MLSEGYGPLSHARRLIALDDIQAAERLALASPALLEVLQDLHERRIVRLGEGHLEVFDVDRLRRVANFSRARAVC
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27038; Mature: 26906
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNGVSWRSRLLSDYWFSHLPADLQDSLLDAARQRRKTPGRRLFEKGDLPCGVYVLLEGS CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECC VRIGAAHEQRLLTNVEPASAPCWFGEVSLFDGLPRRFEVCSLEQSIFLHIPQPFLARLLD EEECCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCHHEEECCHHHHHHHHH RHSEYWRWFAALLSQKVGLPLQSPEKMRQLPPRARVAWRLLMLSEGYGPLSHARRLIALD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH DIQAAERLALASPALLEVLQDLHERRIVRLGEGHLEVFDVDRLRRVANFSRARAVC HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNGVSWRSRLLSDYWFSHLPADLQDSLLDAARQRRKTPGRRLFEKGDLPCGVYVLLEGS CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECC VRIGAAHEQRLLTNVEPASAPCWFGEVSLFDGLPRRFEVCSLEQSIFLHIPQPFLARLLD EEECCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHHHHHHHCCHHEEECCHHHHHHHHH RHSEYWRWFAALLSQKVGLPLQSPEKMRQLPPRARVAWRLLMLSEGYGPLSHARRLIALD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH DIQAAERLALASPALLEVLQDLHERRIVRLGEGHLEVFDVDRLRRVANFSRARAVC HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA