| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043514
Identifier: 66043514
GI number: 66043514
Start: 256622
End: 257623
Strand: Direct
Name: 66043514
Synonym: Psyr_0244
Alternate gene names: NA
Gene position: 256622-257623 (Clockwise)
Preceding gene: 66043513
Following gene: 66043515
Centisome position: 4.21
GC content: 60.88
Gene sequence:
>1002_bases ATGCAGGCAAGCAAGCGTCTTCTGGCTGCTCTGACACTGACTTTACTGGGCAGCACCGCTCAGGCTGCCGATGAAGTGGT GGTGTATTCGTCCCGGATCGACGAACTGATCAAGCCGGTATTCGATGCGTACACGGCCAGTACCGGGGTGAAGATCAAAT TCATCACCGACAAGGAAGCGCCGCTGATGCAGCGCATCAAGGCCGAGGGCGAGAATGCCACCGCCGACCTGTTGCTGACG GTCGATGCGGGCAACCTCTGGCAGGCCGAGCGGATGGGTATCCTGCAGCCGTTTACCTCGCCTGTGATCGAAGCCAACAT TCTGCCGCAGTATCGCTCGTCGAGCCACGGCTGGACCGGTCTGAGCCTTCGCGCGCGGACCATCGCCTACTCCACCGACC GGGTGAAGCCTGCCGAGCTGAGCACCTACGAGGCGCTGGCCGACAAGAACTGGGAAGGCCGTCTGTGCCTGCGTACCGCG AAGAAGGTCTACAACCAGTCGCTGACCGCTACGCTGATCGAAACCCACGGCGCCGAAGCGTCGGAGAAAATCCTCAAGGG CTGGGTCAACAACCTGTCCACCGACGTGTTCTCCGATGACATCGCGGTGCTTGAGGCGATCAATGCCGGGCAGTGCGACG TGGGTATCGTCAATTCCTATTACTACGGTCGCCTGCACAAGGAAAAACCGGGTCTGGCGGTGAAGCTGTTCTGGCCTAAC CAGGCTGATCGCGGTGTGCACGTCAACCTGTCGGGTATCGGTCTGACCAAATACGCTCCGCATCCTGAAGCCGCCAAGTC GCTGGTCGAGTGGATGACCGGCCCCGAGGCGCAGAAGATTTTCTCCAGCGTCAATCAGGAGTTCCCGGCCAACCCGAACG TGGCGCCTTCAGAAGAAGTGGCCAGCTGGGGGCCGTTCAAGGCCGACACCCTCCCGGTCGAAGTGGCAGGCAAGCGTCAG GCAGAAGCGATACGCATGATGGATCGCGCGGGCTGGAATTGA
Upstream 100 bases:
>100_bases GGCCTGGACACATCCGGTAACGGCTCCGCTGTCGCTTCGATTGAGATAGCAAATGGGATTCACTACCATTTCGCCTCCTT TGCGAACGCGAGATACCCCG
Downstream 100 bases:
>100_bases TTTAATACCCAAGTGCCTGACTCTCGTTGATACGCTTCGCGCTCATTACACAAATCTTTAATAGCCCGAAAAGCGTGGCT TTCAGGCTTCTGCCCGCAGG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQASKRLLAALTLTLLGSTAQAADEVVVYSSRIDELIKPVFDAYTASTGVKIKFITDKEAPLMQRIKAEGENATADLLLT VDAGNLWQAERMGILQPFTSPVIEANILPQYRSSSHGWTGLSLRARTIAYSTDRVKPAELSTYEALADKNWEGRLCLRTA KKVYNQSLTATLIETHGAEASEKILKGWVNNLSTDVFSDDIAVLEAINAGQCDVGIVNSYYYGRLHKEKPGLAVKLFWPN QADRGVHVNLSGIGLTKYAPHPEAAKSLVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGPFKADTLPVEVAGKRQ AEAIRMMDRAGWN
Sequences:
>Translated_333_residues MQASKRLLAALTLTLLGSTAQAADEVVVYSSRIDELIKPVFDAYTASTGVKIKFITDKEAPLMQRIKAEGENATADLLLT VDAGNLWQAERMGILQPFTSPVIEANILPQYRSSSHGWTGLSLRARTIAYSTDRVKPAELSTYEALADKNWEGRLCLRTA KKVYNQSLTATLIETHGAEASEKILKGWVNNLSTDVFSDDIAVLEAINAGQCDVGIVNSYYYGRLHKEKPGLAVKLFWPN QADRGVHVNLSGIGLTKYAPHPEAAKSLVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGPFKADTLPVEVAGKRQ AEAIRMMDRAGWN >Mature_333_residues MQASKRLLAALTLTLLGSTAQAADEVVVYSSRIDELIKPVFDAYTASTGVKIKFITDKEAPLMQRIKAEGENATADLLLT VDAGNLWQAERMGILQPFTSPVIEANILPQYRSSSHGWTGLSLRARTIAYSTDRVKPAELSTYEALADKNWEGRLCLRTA KKVYNQSLTATLIETHGAEASEKILKGWVNNLSTDVFSDDIAVLEAINAGQCDVGIVNSYYYGRLHKEKPGLAVKLFWPN QADRGVHVNLSGIGLTKYAPHPEAAKSLVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEVASWGPFKADTLPVEVAGKRQ AEAIRMMDRAGWN
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36465; Mature: 36465
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASKRLLAALTLTLLGSTAQAADEVVVYSSRIDELIKPVFDAYTASTGVKIKFITDKEA CCHHHHHHHHHHHHHHCCCHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC PLMQRIKAEGENATADLLLTVDAGNLWQAERMGILQPFTSPVIEANILPQYRSSSHGWTG HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCC LSLRARTIAYSTDRVKPAELSTYEALADKNWEGRLCLRTAKKVYNQSLTATLIETHGAEA EEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEHHCCCHH SEKILKGWVNNLSTDVFSDDIAVLEAINAGQCDVGIVNSYYYGRLHKEKPGLAVKLFWPN HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCC QADRGVHVNLSGIGLTKYAPHPEAAKSLVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEV CCCCCEEEEEECCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHH ASWGPFKADTLPVEVAGKRQAEAIRMMDRAGWN HCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MQASKRLLAALTLTLLGSTAQAADEVVVYSSRIDELIKPVFDAYTASTGVKIKFITDKEA CCHHHHHHHHHHHHHHCCCHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC PLMQRIKAEGENATADLLLTVDAGNLWQAERMGILQPFTSPVIEANILPQYRSSSHGWTG HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCC LSLRARTIAYSTDRVKPAELSTYEALADKNWEGRLCLRTAKKVYNQSLTATLIETHGAEA EEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEEHHCCCHH SEKILKGWVNNLSTDVFSDDIAVLEAINAGQCDVGIVNSYYYGRLHKEKPGLAVKLFWPN HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCC QADRGVHVNLSGIGLTKYAPHPEAAKSLVEWMTGPEAQKIFSSVNQEFPANPNVAPSEEV CCCCCEEEEEECCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHH ASWGPFKADTLPVEVAGKRQAEAIRMMDRAGWN HCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]