Click here to switch to the map view.

The map label for this gene is 66043509

Identifier: 66043509

GI number: 66043509

Start: 252586

End: 252909

Strand: Direct

Name: 66043509

Synonym: Psyr_0239

Alternate gene names: NA

Gene position: 252586-252909 (Clockwise)

Preceding gene: 66043508

Following gene: 66043510

Centisome position: 4.15

GC content: 61.42

Gene sequence:

>324_bases
GTGAAACTGACCTGGAAGATTCTGAGCAGCGCAGGCGTTCTGACGTTGTGGGCGCTCAATGCGCAAGCCGCCGATAGCGC
CCGAGCGCCTGACGACATCATCGCGGCGCATTGTGTTGCCTGTCACAGCGTAGGTCTGCTCAACGCGCCGAAGATCGGTG
ACACGGCGGCCTGGGAACAGCGCGCCCAGCAAAAAGGCGGCCTTGATGGACTGCTGGCCAGCACCATCAAAGGCCTCGGC
ATCATGCCCCCGAAAGGCACCTGCGGCGATTGCACAAACGACGAACTGAAGAGCGCTATCCAGAGCATGTCCGGGCTGAA
GTGA

Upstream 100 bases:

>100_bases
CGGCCGCATCGCTTTCGTAACCCGTTCGACGTCCCGGCACGATTGATCAGTGCGGCCACCCCGGCCAATTTCTGACCCGC
CCCCTTGCGATGAGTGACGC

Downstream 100 bases:

>100_bases
GGTGCACCCTCGTTCCCGTGCCTGAGCGCCCGGCGCTGTGCATGCGTTTTATGGGAGCGAGCCGGGCAACGCTTCGCCTG
CTCGCGAAGATGATGTTTAG

Product: cytochrome c5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKLTWKILSSAGVLTLWALNAQAADSARAPDDIIAAHCVACHSVGLLNAPKIGDTAAWEQRAQQKGGLDGLLASTIKGLG
IMPPKGTCGDCTNDELKSAIQSMSGLK

Sequences:

>Translated_107_residues
MKLTWKILSSAGVLTLWALNAQAADSARAPDDIIAAHCVACHSVGLLNAPKIGDTAAWEQRAQQKGGLDGLLASTIKGLG
IMPPKGTCGDCTNDELKSAIQSMSGLK
>Mature_107_residues
MKLTWKILSSAGVLTLWALNAQAADSARAPDDIIAAHCVACHSVGLLNAPKIGDTAAWEQRAQQKGGLDGLLASTIKGLG
IMPPKGTCGDCTNDELKSAIQSMSGLK

Specific function: It is unreactive with cytochrome c reductase or oxidase but seems to function as an intermediate in nitrate respiration of facultative anaerobic pseudmonads [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11059; Mature: 11059

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTWKILSSAGVLTLWALNAQAADSARAPDDIIAAHCVACHSVGLLNAPKIGDTAAWEQ
CCCHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RAQQKGGLDGLLASTIKGLGIMPPKGTCGDCTNDELKSAIQSMSGLK
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLTWKILSSAGVLTLWALNAQAADSARAPDDIIAAHCVACHSVGLLNAPKIGDTAAWEQ
CCCHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
RAQQKGGLDGLLASTIKGLGIMPPKGTCGDCTNDELKSAIQSMSGLK
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA