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The map label for this gene is dadX [H]

Identifier: 66043507

GI number: 66043507

Start: 250813

End: 251886

Strand: Direct

Name: dadX [H]

Synonym: Psyr_0237

Alternate gene names: 66043507

Gene position: 250813-251886 (Clockwise)

Preceding gene: 66043506

Following gene: 66043508

Centisome position: 4.12

GC content: 63.69

Gene sequence:

>1074_bases
ATGCGTCCAGCCCGCGCCTTTATCGATCTTCAGGCACTGCGTCACAACTACCAATTGGCCCGTGAAAGCAGCGGCGGCAA
AGCGCTCGCCGTCGTCAAGGCCGATGCCTACGGCCACGGCGCGGTGCGCGTCGCGCAGGCACTGGAAGCGCAGGCCGACG
GTTTTGCAGTGGCTTGCATCGAAGAGGCGCTAGAGCTGCGTGCGGCAGGTATCCGTGCGCCCGTCCTGCTGCTCGAAGGC
TTTTTCGAAGCCGACGAGCTGGCGCTGATTGTCGAGCATGACCTGTGGACCGTTGTACACGCGACCTGGCAACTGGAAGC
TATCGAGCAGGCGCGCCTGGGCAAGCCGATAACCGTCTGGCTCAAGCTCGACACCGGCATGCACCGTGTCGGCCTGCATC
CTCACGAGTACCAGGCGGGTTATCAGCGTCTGCTGGCAACCGGCAAAGTGGCCAGGATCGTGCTGATGAGCCACTTCTCC
CGCGCCGATGAGCTGAACAGCGGCTGCAGTGATGAGCAGCTCGCGGTATTCGAGACCTTTCGCAAGGGGCTGGCAGCAGA
AACCAGTCTGAAAAACTCCCCGGCGGTGCTGGGCTGGCCACAGATTCCGAGCGACTGGTCGCGCCCGGGCATCATGCTCT
ACGGTGCTACGCCGTTTGATCAGGTGCACCCGCTGGCGGATCGCCTGCAACCGGTGATGACCCTGGAATCGAAGATCATC
AGCGTGCGTGAACTGCCCGTTGGTGAGCCCGTGGGCTATGGCGCGACATTTGTCTGTGACCGGCCGTTGCGTATCGGTGT
AGTGGCGATGGGGTACGCCGACGGCTATCCGCGTCACGCGCCGACCGGCACGCCCGTGCAGATCGATGGCCAGCCATCCA
GGCTGCTCGGACGCGTGTCCATGGACATGCTCTGCGTGGACCTCACCGAGGTGCCGCAGGCCGGGCTCGGCAGCCGCGTC
GAGCTGTGGGGCAAGCAGGTGCTCGCCAGTGAAGTGGCCCAGCGCGCAGAAACCATTCCCTACGAAATCTTCTGCAATCT
GCGTCGCGTTCCGCGCATCTATTCCGAGGACTGA

Upstream 100 bases:

>100_bases
TGTCGGTGGTTGCCGCGCTGCCCTGACTCCCTTTTGCCCGGCGCGTCCCTGCGTCGGGTTGATCTTCCCCTTCCATCCTT
TCAGGCAAGTAAACGTCATC

Downstream 100 bases:

>100_bases
TTCAGCCCTCTGTGCTCCAGGCCGCGGTGGGTCAGGTGTCTGTCGAAGTGTTGTAAATATCGAACGCTGTTGCCATGATG
GCGTTCACATCGACTAGACC

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRPARAFIDLQALRHNYQLARESSGGKALAVVKADAYGHGAVRVAQALEAQADGFAVACIEEALELRAAGIRAPVLLLEG
FFEADELALIVEHDLWTVVHATWQLEAIEQARLGKPITVWLKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHFS
RADELNSGCSDEQLAVFETFRKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQPVMTLESKII
SVRELPVGEPVGYGATFVCDRPLRIGVVAMGYADGYPRHAPTGTPVQIDGQPSRLLGRVSMDMLCVDLTEVPQAGLGSRV
ELWGKQVLASEVAQRAETIPYEIFCNLRRVPRIYSED

Sequences:

>Translated_357_residues
MRPARAFIDLQALRHNYQLARESSGGKALAVVKADAYGHGAVRVAQALEAQADGFAVACIEEALELRAAGIRAPVLLLEG
FFEADELALIVEHDLWTVVHATWQLEAIEQARLGKPITVWLKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHFS
RADELNSGCSDEQLAVFETFRKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQPVMTLESKII
SVRELPVGEPVGYGATFVCDRPLRIGVVAMGYADGYPRHAPTGTPVQIDGQPSRLLGRVSMDMLCVDLTEVPQAGLGSRV
ELWGKQVLASEVAQRAETIPYEIFCNLRRVPRIYSED
>Mature_357_residues
MRPARAFIDLQALRHNYQLARESSGGKALAVVKADAYGHGAVRVAQALEAQADGFAVACIEEALELRAAGIRAPVLLLEG
FFEADELALIVEHDLWTVVHATWQLEAIEQARLGKPITVWLKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHFS
RADELNSGCSDEQLAVFETFRKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQPVMTLESKII
SVRELPVGEPVGYGATFVCDRPLRIGVVAMGYADGYPRHAPTGTPVQIDGQPSRLLGRVSMDMLCVDLTEVPQAGLGSRV
ELWGKQVLASEVAQRAETIPYEIFCNLRRVPRIYSED

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

Organism=Escherichia coli, GI1790487, Length=350, Percent_Identity=49.1428571428571, Blast_Score=320, Evalue=1e-88,
Organism=Escherichia coli, GI1787439, Length=355, Percent_Identity=47.887323943662, Blast_Score=314, Evalue=6e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608
- InterPro:   IPR020622 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 39195; Mature: 39195

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00395 ALANINE_RACEMASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPARAFIDLQALRHNYQLARESSGGKALAVVKADAYGHGAVRVAQALEAQADGFAVACI
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEHHHH
EEALELRAAGIRAPVLLLEGFFEADELALIVEHDLWTVVHATWQLEAIEQARLGKPITVW
HHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHCCCCEEEE
LKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHFSRADELNSGCSDEQLAVFETF
EEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQPVMTLESKII
HHCCHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SVRELPVGEPVGYGATFVCDRPLRIGVVAMGYADGYPRHAPTGTPVQIDGQPSRLLGRVS
HHCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHH
MDMLCVDLTEVPQAGLGSRVELWGKQVLASEVAQRAETIPYEIFCNLRRVPRIYSED
HHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHCCCCCCCC
>Mature Secondary Structure
MRPARAFIDLQALRHNYQLARESSGGKALAVVKADAYGHGAVRVAQALEAQADGFAVACI
CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEHHHH
EEALELRAAGIRAPVLLLEGFFEADELALIVEHDLWTVVHATWQLEAIEQARLGKPITVW
HHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHCCCCEEEE
LKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHFSRADELNSGCSDEQLAVFETF
EEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQPVMTLESKII
HHCCHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SVRELPVGEPVGYGATFVCDRPLRIGVVAMGYADGYPRHAPTGTPVQIDGQPSRLLGRVS
HHCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHH
MDMLCVDLTEVPQAGLGSRVELWGKQVLASEVAQRAETIPYEIFCNLRRVPRIYSED
HHHHEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA