| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is recG [H]
Identifier: 66043471
GI number: 66043471
Start: 215460
End: 217535
Strand: Reverse
Name: recG [H]
Synonym: Psyr_0201
Alternate gene names: 66043471
Gene position: 217535-215460 (Counterclockwise)
Preceding gene: 66043472
Following gene: 66043470
Centisome position: 3.57
GC content: 63.73
Gene sequence:
>2076_bases ATGAGCGAGCTTTCCAGGGTCTCGGTCACGGCGCTCAAGGGTGTCGGCGAAGCGATGGCAGAAAAGCTGGCCAAGGTCGG CCTGGAAACACTGCAGGACGTGCTGTTCCATCTGCCGCTGCGTTATCAGGATCGCACGCGCATCGTACCGATCGGTGCGC TGCGTCCCGGTCAGGATGCCGTTATCGAAGGCGTGGTCAGCGGTGCCGATGTGGTGATGGGCAAGCGTCGCAGCCTGCTG GTGCGGCTGGGCGACGGCACCGGGGTCGTCAGCCTGCGCTTCTACCATTTCAGCAACGCCCAGAAAGAAAGCATGAAGCG TGGCACGCACCTGCGTTGCTTCGGCGAAGCGCGCCCGGGTGCTTCCGGACTGGAGATCTATCACCCGGAATATCGGGCGA TTACCGGTGATGAGCCCGCGCCCGTCGAACAGACCCTCACGCCGATCTACCCGACGACCGAAGGCCTGACCCAACAGCGT CTGCGCCAGCTGTGCCAGCAAAGCCTGGCGATGCTCGGCCCCAAAAGTCTGCCGGACTGGCTGCCTGAAGAGCTGGCCCG CGATTATCAGCTGGCCCCGCTGGATGATGCGATCCGTTACCTGCATCACCCGCCGGCCGATGCCGACGTGGAGGAGCTGG CCCTCGGGCATCATTGGGCGCAGCACCGACTGGCTTTCGAAGAACTGCTGACTCACCAGCTTTCCCAGCAACGCCTGCGT GAAAGCCTGCGGTCACAGCGCGCACCGGCATTGCCCGTTGCGAAAAAACTGCCGAAACAGTTTCTCGCCAACCTCGGCTT TGCCCCCACCGGCGCGCAGCAGCGTGTCGGCAAGGAAGTCGCCTATGACCTGAGTCAGCCTGAGCCGATGCTGCGGCTGA TTCAGGGCGACGTAGGGTCGGGCAAGACCGTGGTTGCTGCGCTGGCTGCATTGCAGGCACTGGAAGCGGGTTATCAAGTG GCGCTGATGGCGCCCACCGAGATTCTCGCCGAGCAGCACTACATCAACTTCCAGCGCTGGCTTGAGCCCCTGGGCGTGGG TGTGGCATGGCTGGCGGGCAAGCTCAAAGGCAAGGCGCGCGTCGCGTCTCTGGAGCAGATCGCCGGCGGCACACCCATGG TGGTCGGCACCCATGCGCTGTTTCAGGACGAAGTGCAGTTCAAGAACCTGGCACTGGTGATCATCGACGAGCAGCACCGG TTCGGCGTTCAGCAACGCCTGGCGCTGCGCAAAAAGGGCGTTGGCGGTCTGATGTGCCCGCATCAGTTGATCATGACCGC CACACCGATCCCGCGCACGCTGGCCATGAGTGCCTACGCCGACCTGGACACTTCGATCCTCGACGAACTGCCGCCGGGGC GGACGCCAGTCAATACCGTGCTGGTTGCCGACAGTCGCCGCCTGGAAGTCGTGGAGCGGGTGCGCGCCGCCTGCGCAGAA GGGCGCCAGGCCTACTGGGTGTGCACGCTGATCGAAGAATCCGAAGAGCTGACCTGCAAGGCCGCTGAAACCACCTACGA AGAGTTGAGCAGCGCGTTGGGTGACGTGCGCGTCGGGCTGATTCACGGGCGCATGAAGCCTGCAGAAAAGGCCGCGATCA TGGCCGAGTTCAAGCAAGGTGCGCTGCAATTGTTGGTGGCAACGACGGTCATCGAAGTCGGTGTCGACGTGCCGAACTCC AGTCTGATGATCATCGAGAACCCCGAGCGCCTCGGCCTGGCGCAATTGCACCAGTTGCGCGGCCGCGTCGGGCGCGGCAG CGCGGTGAGTCATTGTGTGCTGCTCTACCATCCGCCGCTTTCACAGATCGGACGGCAGCGCCTGGGCATCATGCGCGAAA CCAACGATGGTTTCGTCATCGCCGAAAAAGACCTTGAACTGCGTGGCCCCGGCGAAATGCTCGGCACCCGACAAACGGGC CTTCTGCAATTCAAGGTCGCCGACCTGATGCGCGACGCAGACCTGCTACCGGCCGTACGCGACGCGGCTCAGGCCTTGTT GGAGCGCTGGCCGCAACACGTCAGCCCACTGCTCGACAGGTGGCTGCGTCATGGCCAGCAGTATGGCCAGGTGTGA
Upstream 100 bases:
>100_bases CAAGCTTCCCGAGACCCAAAGCCATCGAAATCCTCGCTGACTCTGCACGTCTGTGCTCGGTGGCACGTCCGAAAACAGTC GCTAGCTAGGCAGAACAGAA
Downstream 100 bases:
>100_bases TGCAGACTATGCTTTGCAAACCGCGTGCGACCCAAATCGAATAACGTGGTTATACTTCAGAAAATGTAGGAATTTGGACA TAGCTCATGACAGAAGTCGC
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MSELSRVSVTALKGVGEAMAEKLAKVGLETLQDVLFHLPLRYQDRTRIVPIGALRPGQDAVIEGVVSGADVVMGKRRSLL VRLGDGTGVVSLRFYHFSNAQKESMKRGTHLRCFGEARPGASGLEIYHPEYRAITGDEPAPVEQTLTPIYPTTEGLTQQR LRQLCQQSLAMLGPKSLPDWLPEELARDYQLAPLDDAIRYLHHPPADADVEELALGHHWAQHRLAFEELLTHQLSQQRLR ESLRSQRAPALPVAKKLPKQFLANLGFAPTGAQQRVGKEVAYDLSQPEPMLRLIQGDVGSGKTVVAALAALQALEAGYQV ALMAPTEILAEQHYINFQRWLEPLGVGVAWLAGKLKGKARVASLEQIAGGTPMVVGTHALFQDEVQFKNLALVIIDEQHR FGVQQRLALRKKGVGGLMCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRLEVVERVRAACAE GRQAYWVCTLIEESEELTCKAAETTYEELSSALGDVRVGLIHGRMKPAEKAAIMAEFKQGALQLLVATTVIEVGVDVPNS SLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPLSQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTG LLQFKVADLMRDADLLPAVRDAAQALLERWPQHVSPLLDRWLRHGQQYGQV
Sequences:
>Translated_691_residues MSELSRVSVTALKGVGEAMAEKLAKVGLETLQDVLFHLPLRYQDRTRIVPIGALRPGQDAVIEGVVSGADVVMGKRRSLL VRLGDGTGVVSLRFYHFSNAQKESMKRGTHLRCFGEARPGASGLEIYHPEYRAITGDEPAPVEQTLTPIYPTTEGLTQQR LRQLCQQSLAMLGPKSLPDWLPEELARDYQLAPLDDAIRYLHHPPADADVEELALGHHWAQHRLAFEELLTHQLSQQRLR ESLRSQRAPALPVAKKLPKQFLANLGFAPTGAQQRVGKEVAYDLSQPEPMLRLIQGDVGSGKTVVAALAALQALEAGYQV ALMAPTEILAEQHYINFQRWLEPLGVGVAWLAGKLKGKARVASLEQIAGGTPMVVGTHALFQDEVQFKNLALVIIDEQHR FGVQQRLALRKKGVGGLMCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRLEVVERVRAACAE GRQAYWVCTLIEESEELTCKAAETTYEELSSALGDVRVGLIHGRMKPAEKAAIMAEFKQGALQLLVATTVIEVGVDVPNS SLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPLSQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTG LLQFKVADLMRDADLLPAVRDAAQALLERWPQHVSPLLDRWLRHGQQYGQV >Mature_690_residues SELSRVSVTALKGVGEAMAEKLAKVGLETLQDVLFHLPLRYQDRTRIVPIGALRPGQDAVIEGVVSGADVVMGKRRSLLV RLGDGTGVVSLRFYHFSNAQKESMKRGTHLRCFGEARPGASGLEIYHPEYRAITGDEPAPVEQTLTPIYPTTEGLTQQRL RQLCQQSLAMLGPKSLPDWLPEELARDYQLAPLDDAIRYLHHPPADADVEELALGHHWAQHRLAFEELLTHQLSQQRLRE SLRSQRAPALPVAKKLPKQFLANLGFAPTGAQQRVGKEVAYDLSQPEPMLRLIQGDVGSGKTVVAALAALQALEAGYQVA LMAPTEILAEQHYINFQRWLEPLGVGVAWLAGKLKGKARVASLEQIAGGTPMVVGTHALFQDEVQFKNLALVIIDEQHRF GVQQRLALRKKGVGGLMCPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRLEVVERVRAACAEG RQAYWVCTLIEESEELTCKAAETTYEELSSALGDVRVGLIHGRMKPAEKAAIMAEFKQGALQLLVATTVIEVGVDVPNSS LMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPLSQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTGL LQFKVADLMRDADLLPAVRDAAQALLERWPQHVSPLLDRWLRHGQQYGQV
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=690, Percent_Identity=57.9710144927536, Blast_Score=769, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=391, Percent_Identity=36.5728900255754, Blast_Score=222, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 76045; Mature: 75914
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELSRVSVTALKGVGEAMAEKLAKVGLETLQDVLFHLPLRYQDRTRIVPIGALRPGQDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHH VIEGVVSGADVVMGKRRSLLVRLGDGTGVVSLRFYHFSNAQKESMKRGTHLRCFGEARPG HHHHHHCCHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCEEEEEECCCCC ASGLEIYHPEYRAITGDEPAPVEQTLTPIYPTTEGLTQQRLRQLCQQSLAMLGPKSLPDW CCCCEEECCCCEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LPEELARDYQLAPLDDAIRYLHHPPADADVEELALGHHWAQHRLAFEELLTHQLSQQRLR CHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLRSQRAPALPVAKKLPKQFLANLGFAPTGAQQRVGKEVAYDLSQPEPMLRLIQGDVGS HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCC GKTVVAALAALQALEAGYQVALMAPTEILAEQHYINFQRWLEPLGVGVAWLAGKLKGKAR CHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH VASLEQIAGGTPMVVGTHALFQDEVQFKNLALVIIDEQHRFGVQQRLALRKKGVGGLMCP HHHHHHHCCCCCEEEECHHHHHHHHHHCCEEEEEEECHHHHCHHHHHHHHHCCCCCCCCC HQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRLEVVERVRAACAE HHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHC GRQAYWVCTLIEESEELTCKAAETTYEELSSALGDVRVGLIHGRMKPAEKAAIMAEFKQG CCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHH ALQLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPL HHHHHHHHHHHHHCCCCCCCCEEEEECCHHCCHHHHHHHHCCCCCCCHHHEEEEEECCCH SQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDADLLPAVR HHHHHHHHCCEEECCCCEEEEECCCCCCCCHHHHCCCCCCEEEHHHHHHHHCHHHHHHHH DAAQALLERWPQHVSPLLDRWLRHGQQYGQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SELSRVSVTALKGVGEAMAEKLAKVGLETLQDVLFHLPLRYQDRTRIVPIGALRPGQDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHH VIEGVVSGADVVMGKRRSLLVRLGDGTGVVSLRFYHFSNAQKESMKRGTHLRCFGEARPG HHHHHHCCHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHCCCEEEEEECCCCC ASGLEIYHPEYRAITGDEPAPVEQTLTPIYPTTEGLTQQRLRQLCQQSLAMLGPKSLPDW CCCCEEECCCCEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC LPEELARDYQLAPLDDAIRYLHHPPADADVEELALGHHWAQHRLAFEELLTHQLSQQRLR CHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESLRSQRAPALPVAKKLPKQFLANLGFAPTGAQQRVGKEVAYDLSQPEPMLRLIQGDVGS HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCC GKTVVAALAALQALEAGYQVALMAPTEILAEQHYINFQRWLEPLGVGVAWLAGKLKGKAR CHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHH VASLEQIAGGTPMVVGTHALFQDEVQFKNLALVIIDEQHRFGVQQRLALRKKGVGGLMCP HHHHHHHCCCCCEEEECHHHHHHHHHHCCEEEEEEECHHHHCHHHHHHHHHCCCCCCCCC HQLIMTATPIPRTLAMSAYADLDTSILDELPPGRTPVNTVLVADSRRLEVVERVRAACAE HHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHC GRQAYWVCTLIEESEELTCKAAETTYEELSSALGDVRVGLIHGRMKPAEKAAIMAEFKQG CCCEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHH ALQLLVATTVIEVGVDVPNSSLMIIENPERLGLAQLHQLRGRVGRGSAVSHCVLLYHPPL HHHHHHHHHHHHHCCCCCCCCEEEEECCHHCCHHHHHHHHCCCCCCCHHHEEEEEECCCH SQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTGLLQFKVADLMRDADLLPAVR HHHHHHHHCCEEECCCCEEEEECCCCCCCCHHHHCCCCCCEEEHHHHHHHHCHHHHHHHH DAAQALLERWPQHVSPLLDRWLRHGQQYGQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]