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The map label for this gene is oxyR [H]

Identifier: 66043472

GI number: 66043472

Start: 217547

End: 218470

Strand: Reverse

Name: oxyR [H]

Synonym: Psyr_0202

Alternate gene names: 66043472

Gene position: 218470-217547 (Counterclockwise)

Preceding gene: 66043473

Following gene: 66043471

Centisome position: 3.59

GC content: 60.5

Gene sequence:

>924_bases
ATGACTCTTACAGAATTGCGCTACATCGTTACGCTCGCCCAGGAGCAGCACTTTGGCCATGCAGCAGAACGCTGCCATGT
CAGCCAGCCAACGCTGTCGGTGGGTGTCAAAAAACTCGAAGACGAACTCGGTGTGCTCATTTTCGAGCGCAGCAAAAGTG
CTGTGCGCCTGACACCGGTCGGTGAAGGCATCGTTGCGCAGGCGCAGAAAGTGCTGGAGCAGGCCCAGGGTATCCGCGAG
CTGGCCCAGGCCGGCAAGAACCAGCTGACCGCCCCGCTGAAAGTCGGCGCGATCTACACCGTCGGTCCTTACCTGTTTCC
TCACCTGATCCCACAACTGCACCGGGTCGCCCCGCAGATGCCGTTGTACATCGAAGAAAACTTCACGCATGTGCTGCGCG
ACAAGCTGCGTAACGGTGAGCTGGATGCCGTCATCATTGCCTTGCCGTTCAACGAAGCCGACGTGCTGACCCTGCCGCTT
TACGACGAACCGTTCTCTGTGCTGATGCCGGCCGACCATCCCTGGACTCAGAAAGAGACCATCGATGCCTCGGCGCTCAA
CGACAAGAGCCTGCTGTTGCTAGGCGAAGGTCACTGCTTCCGTGATCAGGTCCTGGAAGCCTGCCCGACGCTGGGCAAAG
GCAACGAAGGTGCCAAGCACACGACAGTAGAATCCAGCTCGCTGGAAACCATTCGGCACATGGTCGCCTCCGGGCTGGGC
ATTTCGATCCTGCCGCTGTCGGCAGTCGACAGCCACCATTACGCACCCGGCGTGATCGAAGTCCGCCCGCTGACGCCGCC
CGTGCCTTTCCGCACGGTCGCCATCGCCTGGCGTGCAAGCTTCCCGAGACCCAAAGCCATCGAAATCCTCGCTGACTCTG
CACGTCTGTGCTCGGTGGCACGTCCGAAAACAGTCGCTAGCTAG

Upstream 100 bases:

>100_bases
AACGCTGAATTGTACTTTTGTTACCCATAAGTACTTCTGATAACGTGCGTCTATCGATCGCACCCGCTATGCTGGGGTCG
CAACTTCATGGACGCACGTT

Downstream 100 bases:

>100_bases
GCAGAACAGAAATGAGCGAGCTTTCCAGGGTCTCGGTCACGGCGCTCAAGGGTGTCGGCGAAGCGATGGCAGAAAAGCTG
GCCAAGGTCGGCCTGGAAAC

Product: regulatory protein, LysR:LysR, substrate-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPVGEGIVAQAQKVLEQAQGIRE
LAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQMPLYIEENFTHVLRDKLRNGELDAVIIALPFNEADVLTLPL
YDEPFSVLMPADHPWTQKETIDASALNDKSLLLLGEGHCFRDQVLEACPTLGKGNEGAKHTTVESSSLETIRHMVASGLG
ISILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSARLCSVARPKTVAS

Sequences:

>Translated_307_residues
MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPVGEGIVAQAQKVLEQAQGIRE
LAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQMPLYIEENFTHVLRDKLRNGELDAVIIALPFNEADVLTLPL
YDEPFSVLMPADHPWTQKETIDASALNDKSLLLLGEGHCFRDQVLEACPTLGKGNEGAKHTTVESSSLETIRHMVASGLG
ISILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSARLCSVARPKTVAS
>Mature_306_residues
TLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPVGEGIVAQAQKVLEQAQGIREL
AQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQMPLYIEENFTHVLRDKLRNGELDAVIIALPFNEADVLTLPLY
DEPFSVLMPADHPWTQKETIDASALNDKSLLLLGEGHCFRDQVLEACPTLGKGNEGAKHTTVESSSLETIRHMVASGLGI
SILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSARLCSVARPKTVAS

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=295, Percent_Identity=40.6779661016949, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1788887, Length=310, Percent_Identity=29.0322580645161, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI157672245, Length=278, Percent_Identity=26.978417266187, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788748, Length=301, Percent_Identity=27.5747508305648, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI2367136, Length=272, Percent_Identity=27.9411764705882, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1787530, Length=254, Percent_Identity=27.9527559055118, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI145693105, Length=283, Percent_Identity=26.1484098939929, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1788296, Length=247, Percent_Identity=25.5060728744939, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787806, Length=303, Percent_Identity=23.1023102310231, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1788297, Length=255, Percent_Identity=28.2352941176471, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787879, Length=254, Percent_Identity=26.7716535433071, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787601, Length=173, Percent_Identity=26.5895953757225, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082132, Length=265, Percent_Identity=24.9056603773585, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33552; Mature: 33421

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPV
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCEEEEECCCCEEEEEEC
GEGIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQM
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEHHHHHHHHHHHHHHHHCCCC
PLYIEENFTHVLRDKLRNGELDAVIIALPFNEADVLTLPLYDEPFSVLMPADHPWTQKET
CEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCC
IDASALNDKSLLLLGEGHCFRDQVLEACPTLGKGNEGAKHTTVESSSLETIRHMVASGLG
CCHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCC
ISILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSARLCSVA
EEEEEEHHCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHCC
RPKTVAS
CCCCCCC
>Mature Secondary Structure 
TLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPV
CHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHCEEEEECCCCEEEEEEC
GEGIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQM
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEHHHHHHHHHHHHHHHHCCCC
PLYIEENFTHVLRDKLRNGELDAVIIALPFNEADVLTLPLYDEPFSVLMPADHPWTQKET
CEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEECCCCCCCCCCC
IDASALNDKSLLLLGEGHCFRDQVLEACPTLGKGNEGAKHTTVESSSLETIRHMVASGLG
CCHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCCC
ISILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSARLCSVA
EEEEEEHHCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCHHHHHCC
RPKTVAS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA