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The map label for this gene is yigB [H]

Identifier: 66043456

GI number: 66043456

Start: 198786

End: 199478

Strand: Direct

Name: yigB [H]

Synonym: Psyr_0186

Alternate gene names: 66043456

Gene position: 198786-199478 (Clockwise)

Preceding gene: 66043455

Following gene: 66043461

Centisome position: 3.26

GC content: 64.79

Gene sequence:

>693_bases
ATGATTAAGCTGGTGACGTTTGATCTTGACGACACGCTCTGGGACACCGCCCCGGCCATTGCCGGTGCCGAAGTCACGCT
GCGTGACTGGCTGGGCGAACACGCGCCCCGGCTGGGAGCGGTTCCTGTCGAGCACCTGTGGGAAATCCGCTCGCGTCTGG
TGGCCGAAGACCCGTCCTTCAAGCACCGTATCAGCGCCTTGCGCCGCCGCGTGCTGTTCCATGCGCTCGAAGATGCCGGC
TACGACCCGGACGAGGCGCAGGACCTGGCCGACCGGGGCTTTGAAGTGTTCCTGCAGGGCCGTCATCAGGTGCAGATTTT
CCCTGAGGTGCAACCGATGCTGGAAATTCTCGCCAAGACCTTCACGCTCGGCGTGATTACCAATGGCAATGCCGATGTGC
GTCGTCTGGGGCTGGCGGACTACTTTGCCTTCGCGCTGTGCGCCGAGGACCTGGGCATCGGCAAGCCTGATCCGGCACCG
TTCGTGGAGGCGTTGCGCCGCGCAAAGGTCGATGCCGGCGCGGCGGTGCATGTCGGTGACCATCCCAAGGACGATATCGC
AGGTGCCCAGCAGGCCGGCATGCGCGCCATCTGGTACAACCCGCAAGGCAAGGCCTGGGATGCGGATCGACTGCCCGATG
CCGAGATCCACAACCTGTCGCAACTGCCCGAGGTGCTGGCGCGCTGGGCCTGA

Upstream 100 bases:

>100_bases
GATATTAAGACCACGCAGATATATACACACCTGGACTTCCAGCATTTGGCTACTGTTTATGACAGCGCCCATCCCCGAGC
CAAACGTAAAGGAACTGCAG

Downstream 100 bases:

>100_bases
AGGCGCACTGACAGGCGCGCATAGAAAAGCCCGCAGCGACGGCGGGCTTTTCTCATACAGTCATGCAGCCTCAGATAGGG
CGGCTACCGTATTTGTTGTC

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MIKLVTFDLDDTLWDTAPAIAGAEVTLRDWLGEHAPRLGAVPVEHLWEIRSRLVAEDPSFKHRISALRRRVLFHALEDAG
YDPDEAQDLADRGFEVFLQGRHQVQIFPEVQPMLEILAKTFTLGVITNGNADVRRLGLADYFAFALCAEDLGIGKPDPAP
FVEALRRAKVDAGAAVHVGDHPKDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLARWA

Sequences:

>Translated_230_residues
MIKLVTFDLDDTLWDTAPAIAGAEVTLRDWLGEHAPRLGAVPVEHLWEIRSRLVAEDPSFKHRISALRRRVLFHALEDAG
YDPDEAQDLADRGFEVFLQGRHQVQIFPEVQPMLEILAKTFTLGVITNGNADVRRLGLADYFAFALCAEDLGIGKPDPAP
FVEALRRAKVDAGAAVHVGDHPKDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLARWA
>Mature_230_residues
MIKLVTFDLDDTLWDTAPAIAGAEVTLRDWLGEHAPRLGAVPVEHLWEIRSRLVAEDPSFKHRISALRRRVLFHALEDAG
YDPDEAQDLADRGFEVFLQGRHQVQIFPEVQPMLEILAKTFTLGVITNGNADVRRLGLADYFAFALCAEDLGIGKPDPAP
FVEALRRAKVDAGAAVHVGDHPKDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLARWA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=229, Percent_Identity=33.1877729257642, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 25526; Mature: 25526

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLVTFDLDDTLWDTAPAIAGAEVTLRDWLGEHAPRLGAVPVEHLWEIRSRLVAEDPSF
CEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCH
KHRISALRRRVLFHALEDAGYDPDEAQDLADRGFEVFLQGRHQVQIFPEVQPMLEILAKT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEECCCCEEEECCCHHHHHHHHHHH
FTLGVITNGNADVRRLGLADYFAFALCAEDLGIGKPDPAPFVEALRRAKVDAGAAVHVGD
HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEECCC
HPKDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLARWA
CCCHHHCCHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLVTFDLDDTLWDTAPAIAGAEVTLRDWLGEHAPRLGAVPVEHLWEIRSRLVAEDPSF
CEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCH
KHRISALRRRVLFHALEDAGYDPDEAQDLADRGFEVFLQGRHQVQIFPEVQPMLEILAKT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHEEECCCCEEEECCCHHHHHHHHHHH
FTLGVITNGNADVRRLGLADYFAFALCAEDLGIGKPDPAPFVEALRRAKVDAGAAVHVGD
HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEECCC
HPKDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLARWA
CCCHHHCCHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]