| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043451
Identifier: 66043451
GI number: 66043451
Start: 194904
End: 195050
Strand: Direct
Name: 66043451
Synonym: Psyr_0181
Alternate gene names: NA
Gene position: 194904-195050 (Clockwise)
Preceding gene: 66043447
Following gene: 66043452
Centisome position: 3.2
GC content: 54.42
Gene sequence:
>147_bases ATGAAGCGCCTGATCTCTTCGCTTGCTGCGCTTGTCGCGGTCGCTTGTCTTGTTACAGCTTGTGGCCAGAAAGGCCCGCT GTATCTGCCGGATGACACCAAAACCCCGGACGAACAAGCCAAATCGCAATCGCACAAGCACCTTTAA
Upstream 100 bases:
>100_bases CGCGCCAAAGGCCCGCCAGACGGGACGCTGCTCGCATAGGCAAGGTGCCGGGTGGTCGGTATACTCGGGCGCAATTAATG CTTTTACAAAGGATTTCGCC
Downstream 100 bases:
>100_bases GGGACTCCAATGGACGCCTTCAACTACCGCGACGGTGAGCTGTTCGCGGAAGGGGTAGCATTGTCTGCCATTGCCGAGCG CTTCGGCACGCCGACCTATG
Product: lipoprotein LppL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MKRLISSLAALVAVACLVTACGQKGPLYLPDDTKTPDEQAKSQSHKHL
Sequences:
>Translated_48_residues MKRLISSLAALVAVACLVTACGQKGPLYLPDDTKTPDEQAKSQSHKHL >Mature_48_residues MKRLISSLAALVAVACLVTACGQKGPLYLPDDTKTPDEQAKSQSHKHL
Specific function: Unknown
COG id: COG5567
COG function: function code N; Predicted small periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5135; Mature: 5135
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLISSLAALVAVACLVTACGQKGPLYLPDDTKTPDEQAKSQSHKHL CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure MKRLISSLAALVAVACLVTACGQKGPLYLPDDTKTPDEQAKSQSHKHL CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA