The gene/protein map for NC_007005 is currently unavailable.
Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is gabD [H]

Identifier: 66043419

GI number: 66043419

Start: 161189

End: 162646

Strand: Reverse

Name: gabD [H]

Synonym: Psyr_0149

Alternate gene names: 66043419

Gene position: 162646-161189 (Counterclockwise)

Preceding gene: 66043420

Following gene: 66043416

Centisome position: 2.67

GC content: 64.06

Gene sequence:

>1458_bases
ATGCTCAAGAATCAGTTGAAAGACCCCAGCCTGCTGGTAGACCGCGCCTACGTCGACGGGCAATGGATCAGCGCTGACGA
TGGTGCCACCCTGACCATCAGCAACCCGGCCACCGGCGAGGCGCTGGCGCAGGTGCCGGCCCTGCAGGGCGTCGAAACCC
GGCGTGCCATCGAGGCGGCTGATCGCGCCTGGCCCGCGTGGCGTGCACGTCCCGCGGCCGAACGCGCGGCGCTGCTGGAG
CGCTGGCATCAGGCGATGCTCGACAACGTCGAAGACCTGGCGCTGATCATGACCTTTGAGCAGGGCAAGCCGCTGAATGA
GTCGCGCGGCGAGATCCGCTACGGTGCCAGCTTCGTCAAATGGTTCGCCGAGGAGGCACGCCGCTCATACGGTGAAACCA
TTCCCGCGCCCAGTGCAGACCGTCGTTTGATGACCCTCAAGCAACCAGTGGGCGTCTGTGCCGCGATCACACCGTGGAAC
TTCCCCAACGCCATGATCACCCGCAAGTGTGCGCCGGCCCTGGCTGCCGGGTGCCCGATCATCGTCAAACCATCGGACCT
CACGCCCTTGTCAGCCCTGGCGCTGGCGTTGCTGGCCGAGCGCGTGGGTATTCCTGCCGGGGTGTTCAACGTCATCACCG
GCATGCCCACCGGCATCGGTGAAGAGCTGACCGGCAATCCGGTGGTGCGCAAGATTTCCTTCACCGGTTCGACACCGGTC
GGCCGTCTGCTGATGCGCCAGAGCGCCGAACACATCAAACGTCTGAGCCTGGAACTGGGTGGCAACGCGCCCTTCATCGT
GTTTGACGACGCGGACCTGGAACAGGCGGTGACGGGCATCATGCTCAGCAAATTCCGCAACGCCGGGCAGACTTGCGTGT
GCGCCAACCGGATTCTGGTGCAAAACGGCATTTACGACCGTTTCGCTGCACGGCTGGTGGAAGAAGTGAGCAAGCTCAAG
GTCGGCAACGGACTGGAAGAGGGCGTGACCATCGGCCCGCTGATCAACCCGGCGGCGGTCAGCAAAGTCGCCCGGCATAT
CGACGATGCGCTGAGCCAGGGAGCGAAACTGCTGCACGGCGGTTCTCCTGACGGCACCAGCCAGTTCGTCCAGCCCACGG
TATTGGGCGATACCCACGCAGGCATGCTGCTGGCCAACGAAGAAACCTTCGGCCCGGTCGCGCCACTGATGCGCTTCACA
GATGAAGCCGAAGCGCTGGCACTGGCCAACGCCACGCCCTATGGCCTTGGCGCGTATTACTTCACCCAGGACCTGCGCCG
CTCATGGCGTTTCGGCGAAGCGCTGGAGTTCGGCATGGTCGGCCTCAACACCGGCATCATCTCCATGGAAGTCGCCCCCT
TCGGCGGCGTCAAGCAGTCCGGCCTGGGCCGCGAAGGCTCCAGCTACGGACTGGATGAATACCTGGAAGTGAAGGCGTTT
CATGTGGGTGGGTTGTAG

Upstream 100 bases:

>100_bases
AGGCAAATTTCAGCATCGGACGCTGCCGTTATCGCGCTTTCAGCATCCTGGACTGTGGCGTCTGCCTAGACTGGCAATCA
TCCCGGAACAGGACTCGACC

Downstream 100 bases:

>100_bases
AGGCGGAGAAAACAGCGAGTCCCCTTCGCGAACAAGCGAAGCGTCGCCCGGTTCGCTCCTACGGCCTCCGGCCAGAATCA
AAAGCAGACCGTATTCGCCT

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MLKNQLKDPSLLVDRAYVDGQWISADDGATLTISNPATGEALAQVPALQGVETRRAIEAADRAWPAWRARPAAERAALLE
RWHQAMLDNVEDLALIMTFEQGKPLNESRGEIRYGASFVKWFAEEARRSYGETIPAPSADRRLMTLKQPVGVCAAITPWN
FPNAMITRKCAPALAAGCPIIVKPSDLTPLSALALALLAERVGIPAGVFNVITGMPTGIGEELTGNPVVRKISFTGSTPV
GRLLMRQSAEHIKRLSLELGGNAPFIVFDDADLEQAVTGIMLSKFRNAGQTCVCANRILVQNGIYDRFAARLVEEVSKLK
VGNGLEEGVTIGPLINPAAVSKVARHIDDALSQGAKLLHGGSPDGTSQFVQPTVLGDTHAGMLLANEETFGPVAPLMRFT
DEAEALALANATPYGLGAYYFTQDLRRSWRFGEALEFGMVGLNTGIISMEVAPFGGVKQSGLGREGSSYGLDEYLEVKAF
HVGGL

Sequences:

>Translated_485_residues
MLKNQLKDPSLLVDRAYVDGQWISADDGATLTISNPATGEALAQVPALQGVETRRAIEAADRAWPAWRARPAAERAALLE
RWHQAMLDNVEDLALIMTFEQGKPLNESRGEIRYGASFVKWFAEEARRSYGETIPAPSADRRLMTLKQPVGVCAAITPWN
FPNAMITRKCAPALAAGCPIIVKPSDLTPLSALALALLAERVGIPAGVFNVITGMPTGIGEELTGNPVVRKISFTGSTPV
GRLLMRQSAEHIKRLSLELGGNAPFIVFDDADLEQAVTGIMLSKFRNAGQTCVCANRILVQNGIYDRFAARLVEEVSKLK
VGNGLEEGVTIGPLINPAAVSKVARHIDDALSQGAKLLHGGSPDGTSQFVQPTVLGDTHAGMLLANEETFGPVAPLMRFT
DEAEALALANATPYGLGAYYFTQDLRRSWRFGEALEFGMVGLNTGIISMEVAPFGGVKQSGLGREGSSYGLDEYLEVKAF
HVGGL
>Mature_485_residues
MLKNQLKDPSLLVDRAYVDGQWISADDGATLTISNPATGEALAQVPALQGVETRRAIEAADRAWPAWRARPAAERAALLE
RWHQAMLDNVEDLALIMTFEQGKPLNESRGEIRYGASFVKWFAEEARRSYGETIPAPSADRRLMTLKQPVGVCAAITPWN
FPNAMITRKCAPALAAGCPIIVKPSDLTPLSALALALLAERVGIPAGVFNVITGMPTGIGEELTGNPVVRKISFTGSTPV
GRLLMRQSAEHIKRLSLELGGNAPFIVFDDADLEQAVTGIMLSKFRNAGQTCVCANRILVQNGIYDRFAARLVEEVSKLK
VGNGLEEGVTIGPLINPAAVSKVARHIDDALSQGAKLLHGGSPDGTSQFVQPTVLGDTHAGMLLANEETFGPVAPLMRFT
DEAEALALANATPYGLGAYYFTQDLRRSWRFGEALEFGMVGLNTGIISMEVAPFGGVKQSGLGREGSSYGLDEYLEVKAF
HVGGL

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=481, Percent_Identity=53.014553014553, Blast_Score=477, Evalue=1e-134,
Organism=Homo sapiens, GI25777721, Length=494, Percent_Identity=51.417004048583, Blast_Score=467, Evalue=1e-131,
Organism=Homo sapiens, GI25777730, Length=487, Percent_Identity=38.1930184804928, Blast_Score=306, Evalue=2e-83,
Organism=Homo sapiens, GI238814322, Length=475, Percent_Identity=36.8421052631579, Blast_Score=301, Evalue=1e-81,
Organism=Homo sapiens, GI21361176, Length=488, Percent_Identity=37.2950819672131, Blast_Score=295, Evalue=7e-80,
Organism=Homo sapiens, GI12007648, Length=482, Percent_Identity=35.4771784232365, Blast_Score=295, Evalue=8e-80,
Organism=Homo sapiens, GI21614513, Length=472, Percent_Identity=38.135593220339, Blast_Score=295, Evalue=8e-80,
Organism=Homo sapiens, GI153266822, Length=478, Percent_Identity=36.6108786610879, Blast_Score=293, Evalue=3e-79,
Organism=Homo sapiens, GI25777732, Length=482, Percent_Identity=35.6846473029046, Blast_Score=291, Evalue=1e-78,
Organism=Homo sapiens, GI25777724, Length=478, Percent_Identity=34.9372384937238, Blast_Score=283, Evalue=2e-76,
Organism=Homo sapiens, GI115387104, Length=467, Percent_Identity=35.3319057815846, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI25777728, Length=418, Percent_Identity=36.3636363636364, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI25777726, Length=479, Percent_Identity=32.1503131524008, Blast_Score=241, Evalue=8e-64,
Organism=Homo sapiens, GI25952152, Length=474, Percent_Identity=31.0126582278481, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI11095441, Length=476, Percent_Identity=29.8319327731092, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI188035924, Length=465, Percent_Identity=28.8172043010753, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI310128103, Length=475, Percent_Identity=28.2105263157895, Blast_Score=196, Evalue=6e-50,
Organism=Homo sapiens, GI301500698, Length=281, Percent_Identity=38.4341637010676, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI310128093, Length=474, Percent_Identity=28.0590717299578, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI310128091, Length=474, Percent_Identity=27.6371308016878, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI223972651, Length=462, Percent_Identity=29.6536796536797, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI73466520, Length=331, Percent_Identity=29.9093655589124, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI4557303, Length=331, Percent_Identity=29.9093655589124, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI206597441, Length=418, Percent_Identity=28.2296650717703, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI206597439, Length=418, Percent_Identity=28.2296650717703, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI22907049, Length=418, Percent_Identity=28.2296650717703, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI4502043, Length=427, Percent_Identity=27.4004683840749, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI238814371, Length=427, Percent_Identity=27.4004683840749, Blast_Score=143, Evalue=4e-34,
Organism=Homo sapiens, GI310128089, Length=329, Percent_Identity=29.483282674772, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI71773324, Length=335, Percent_Identity=28.6567164179104, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI73695881, Length=330, Percent_Identity=28.4848484848485, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI73695879, Length=330, Percent_Identity=28.4848484848485, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI310128087, Length=474, Percent_Identity=24.8945147679325, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI310128097, Length=255, Percent_Identity=32.9411764705882, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI238859541, Length=431, Percent_Identity=28.7703016241299, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI25777736, Length=431, Percent_Identity=28.7703016241299, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI25777734, Length=431, Percent_Identity=28.7703016241299, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI310128095, Length=289, Percent_Identity=29.0657439446367, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI223972653, Length=179, Percent_Identity=32.4022346368715, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI310128101, Length=247, Percent_Identity=25.1012145748988, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI310128099, Length=233, Percent_Identity=25.3218884120172, Blast_Score=77, Evalue=3e-14,
Organism=Escherichia coli, GI1789015, Length=480, Percent_Identity=59.5833333333333, Blast_Score=606, Evalue=1e-174,
Organism=Escherichia coli, GI1787684, Length=468, Percent_Identity=37.8205128205128, Blast_Score=338, Evalue=4e-94,
Organism=Escherichia coli, GI87081896, Length=475, Percent_Identity=39.5789473684211, Blast_Score=311, Evalue=4e-86,
Organism=Escherichia coli, GI1787558, Length=474, Percent_Identity=37.1308016877637, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1787715, Length=468, Percent_Identity=35.6837606837607, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1786504, Length=473, Percent_Identity=35.9408033826639, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI87082295, Length=483, Percent_Identity=34.7826086956522, Blast_Score=256, Evalue=3e-69,
Organism=Escherichia coli, GI87081926, Length=452, Percent_Identity=32.9646017699115, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1788042, Length=469, Percent_Identity=31.9829424307036, Blast_Score=182, Evalue=6e-47,
Organism=Escherichia coli, GI1787250, Length=431, Percent_Identity=31.322505800464, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI1787653, Length=444, Percent_Identity=26.5765765765766, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17534119, Length=465, Percent_Identity=45.3763440860215, Blast_Score=395, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI17562198, Length=468, Percent_Identity=38.2478632478632, Blast_Score=308, Evalue=4e-84,
Organism=Caenorhabditis elegans, GI133930964, Length=476, Percent_Identity=36.344537815126, Blast_Score=301, Evalue=7e-82,
Organism=Caenorhabditis elegans, GI25144435, Length=472, Percent_Identity=36.6525423728814, Blast_Score=297, Evalue=7e-81,
Organism=Caenorhabditis elegans, GI32564736, Length=410, Percent_Identity=38.0487804878049, Blast_Score=270, Evalue=1e-72,
Organism=Caenorhabditis elegans, GI25143876, Length=486, Percent_Identity=33.3333333333333, Blast_Score=265, Evalue=3e-71,
Organism=Caenorhabditis elegans, GI25143874, Length=487, Percent_Identity=33.264887063655, Blast_Score=264, Evalue=6e-71,
Organism=Caenorhabditis elegans, GI71995606, Length=476, Percent_Identity=32.7731092436975, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17551164, Length=457, Percent_Identity=33.0415754923414, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI71995613, Length=416, Percent_Identity=32.2115384615385, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI71986308, Length=457, Percent_Identity=30.6345733041575, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI115534176, Length=480, Percent_Identity=28.5416666666667, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17564084, Length=436, Percent_Identity=30.2752293577982, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI25146391, Length=373, Percent_Identity=30.2949061662198, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32566756, Length=378, Percent_Identity=30.4232804232804, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI25146394, Length=373, Percent_Identity=30.2949061662198, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17534447, Length=474, Percent_Identity=28.0590717299578, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32564151, Length=428, Percent_Identity=27.1028037383178, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI115532534, Length=350, Percent_Identity=29.1428571428571, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI71990744, Length=313, Percent_Identity=25.2396166134185, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=487, Percent_Identity=46.611909650924, Blast_Score=455, Evalue=1e-129,
Organism=Saccharomyces cerevisiae, GI6320917, Length=475, Percent_Identity=34.7368421052632, Blast_Score=298, Evalue=1e-81,
Organism=Saccharomyces cerevisiae, GI6325196, Length=471, Percent_Identity=35.6687898089172, Blast_Score=294, Evalue=3e-80,
Organism=Saccharomyces cerevisiae, GI6324950, Length=466, Percent_Identity=33.4763948497854, Blast_Score=290, Evalue=3e-79,
Organism=Saccharomyces cerevisiae, GI6323822, Length=496, Percent_Identity=33.6693548387097, Blast_Score=275, Evalue=1e-74,
Organism=Saccharomyces cerevisiae, GI6323821, Length=496, Percent_Identity=33.6693548387097, Blast_Score=274, Evalue=3e-74,
Organism=Saccharomyces cerevisiae, GI6321828, Length=468, Percent_Identity=27.3504273504274, Blast_Score=169, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6321826, Length=477, Percent_Identity=24.7379454926625, Blast_Score=93, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6323757, Length=415, Percent_Identity=26.0240963855422, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281362580, Length=482, Percent_Identity=51.0373443983402, Blast_Score=497, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472918, Length=482, Percent_Identity=51.0373443983402, Blast_Score=497, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472926, Length=482, Percent_Identity=51.0373443983402, Blast_Score=497, Evalue=1e-141,
Organism=Drosophila melanogaster, GI62472936, Length=482, Percent_Identity=51.0373443983402, Blast_Score=497, Evalue=1e-141,
Organism=Drosophila melanogaster, GI21356737, Length=482, Percent_Identity=51.0373443983402, Blast_Score=497, Evalue=1e-141,
Organism=Drosophila melanogaster, GI24650465, Length=469, Percent_Identity=37.3134328358209, Blast_Score=311, Evalue=4e-85,
Organism=Drosophila melanogaster, GI20129399, Length=481, Percent_Identity=38.045738045738, Blast_Score=303, Evalue=2e-82,
Organism=Drosophila melanogaster, GI24585660, Length=491, Percent_Identity=34.2158859470468, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI24638878, Length=475, Percent_Identity=28.4210526315789, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24638876, Length=475, Percent_Identity=28.4210526315789, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24666674, Length=469, Percent_Identity=27.9317697228145, Blast_Score=176, Evalue=4e-44,
Organism=Drosophila melanogaster, GI281360299, Length=333, Percent_Identity=27.9279279279279, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI281360297, Length=333, Percent_Identity=27.9279279279279, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI281360295, Length=333, Percent_Identity=27.9279279279279, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI24586250, Length=333, Percent_Identity=27.9279279279279, Blast_Score=141, Evalue=9e-34,
Organism=Drosophila melanogaster, GI281360301, Length=335, Percent_Identity=27.7611940298507, Blast_Score=141, Evalue=1e-33,
Organism=Drosophila melanogaster, GI281360303, Length=333, Percent_Identity=27.6276276276276, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI45552499, Length=333, Percent_Identity=27.6276276276276, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24668425, Length=434, Percent_Identity=26.7281105990783, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24668417, Length=434, Percent_Identity=26.7281105990783, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24668413, Length=434, Percent_Identity=26.7281105990783, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571806, Length=340, Percent_Identity=27.0588235294118, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571802, Length=340, Percent_Identity=27.0588235294118, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571800, Length=340, Percent_Identity=27.0588235294118, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571798, Length=340, Percent_Identity=27.0588235294118, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571796, Length=340, Percent_Identity=27.0588235294118, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28571794, Length=340, Percent_Identity=27.0588235294118, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574525, Length=466, Percent_Identity=24.2489270386266, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281360293, Length=158, Percent_Identity=30.379746835443, Blast_Score=79, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52011; Mature: 52011

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNQLKDPSLLVDRAYVDGQWISADDGATLTISNPATGEALAQVPALQGVETRRAIEAA
CCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHH
DRAWPAWRARPAAERAALLERWHQAMLDNVEDLALIMTFEQGKPLNESRGEIRYGASFVK
HHCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHH
WFAEEARRSYGETIPAPSADRRLMTLKQPVGVCAAITPWNFPNAMITRKCAPALAAGCPI
HHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCE
IVKPSDLTPLSALALALLAERVGIPAGVFNVITGMPTGIGEELTGNPVVRKISFTGSTPV
EECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHH
GRLLMRQSAEHIKRLSLELGGNAPFIVFDDADLEQAVTGIMLSKFRNAGQTCVCANRILV
HHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHH
QNGIYDRFAARLVEEVSKLKVGNGLEEGVTIGPLINPAAVSKVARHIDDALSQGAKLLHG
HCCHHHHHHHHHHHHHHHHHCCCCHHCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHCC
GSPDGTSQFVQPTVLGDTHAGMLLANEETFGPVAPLMRFTDEAEALALANATPYGLGAYY
CCCCCCHHHCCCEEECCCCCCEEEECCCCCCHHHHHHHHCCHHHHEEECCCCCCCCHHHH
FTQDLRRSWRFGEALEFGMVGLNTGIISMEVAPFGGVKQSGLGREGSSYGLDEYLEVKAF
HHHHHHHHCCCCHHHHHCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEE
HVGGL
ECCCC
>Mature Secondary Structure
MLKNQLKDPSLLVDRAYVDGQWISADDGATLTISNPATGEALAQVPALQGVETRRAIEAA
CCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHH
DRAWPAWRARPAAERAALLERWHQAMLDNVEDLALIMTFEQGKPLNESRGEIRYGASFVK
HHCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHH
WFAEEARRSYGETIPAPSADRRLMTLKQPVGVCAAITPWNFPNAMITRKCAPALAAGCPI
HHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCE
IVKPSDLTPLSALALALLAERVGIPAGVFNVITGMPTGIGEELTGNPVVRKISFTGSTPV
EECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHH
GRLLMRQSAEHIKRLSLELGGNAPFIVFDDADLEQAVTGIMLSKFRNAGQTCVCANRILV
HHHHHHHHHHHHHHHHHEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHH
QNGIYDRFAARLVEEVSKLKVGNGLEEGVTIGPLINPAAVSKVARHIDDALSQGAKLLHG
HCCHHHHHHHHHHHHHHHHHCCCCHHCCCEECCCCCHHHHHHHHHHHHHHHHHCCHHHCC
GSPDGTSQFVQPTVLGDTHAGMLLANEETFGPVAPLMRFTDEAEALALANATPYGLGAYY
CCCCCCHHHCCCEEECCCCCCEEEECCCCCCHHHHHHHHCCHHHHEEECCCCCCCCHHHH
FTQDLRRSWRFGEALEFGMVGLNTGIISMEVAPFGGVKQSGLGREGSSYGLDEYLEVKAF
HHHHHHHHCCCCHHHHHCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEE
HVGGL
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]