| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66043395
Identifier: 66043395
GI number: 66043395
Start: 135597
End: 135953
Strand: Direct
Name: 66043395
Synonym: Psyr_0125
Alternate gene names: NA
Gene position: 135597-135953 (Clockwise)
Preceding gene: 66043394
Following gene: 66043396
Centisome position: 2.23
GC content: 53.5
Gene sequence:
>357_bases ATGGCGATGGTCTTCTGTCGTGGCTGCGCAAAGGAAATACATGAAACGGCACTCAACTGCCCGCAATGTGGCGCCAGTCA GGTCTCTGCAACTCCCGCGAAACAGCTACAACAGACTGGCTCTCCGTGGATGGCTATCGTCTCTCTGGTGCTGGGCATCC TCTGCTCGCTGGCATTGTTCGACGATGGTGAATGGGATCTGGATACCGTCGTCGGGCTCGGCATGTGCTCGATAGCCGGA CTGGTTCTGGGCGTCATCAGCATCAACAAAAAGTTGCCTGGCAACGGAATAGCGATAGCAGGCACTGTCTTGTCAGCAGT ATCGCTGCTGATATTTTTTGGATTAATAGCTAACTGA
Upstream 100 bases:
>100_bases AACTAACTAATTCTTGGCAATACAAACCTTTTAACCCAGAATTTACGGGCGTTTAATCGCTAGCTGGTGATCTGAAAGCT ACTCGATATAAGGAAATAAA
Downstream 100 bases:
>100_bases TTTAGGGAAGAATGAGATGGTATTTTGTCGTGGTTGTGCAAAGGAAATCAGTGATGACGCTGGTACGTGTCCGCACTGCG GGGCTCCGCAGCTGGTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MAMVFCRGCAKEIHETALNCPQCGASQVSATPAKQLQQTGSPWMAIVSLVLGILCSLALFDDGEWDLDTVVGLGMCSIAG LVLGVISINKKLPGNGIAIAGTVLSAVSLLIFFGLIAN
Sequences:
>Translated_118_residues MAMVFCRGCAKEIHETALNCPQCGASQVSATPAKQLQQTGSPWMAIVSLVLGILCSLALFDDGEWDLDTVVGLGMCSIAG LVLGVISINKKLPGNGIAIAGTVLSAVSLLIFFGLIAN >Mature_117_residues AMVFCRGCAKEIHETALNCPQCGASQVSATPAKQLQQTGSPWMAIVSLVLGILCSLALFDDGEWDLDTVVGLGMCSIAGL VLGVISINKKLPGNGIAIAGTVLSAVSLLIFFGLIAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12151; Mature: 12019
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMVFCRGCAKEIHETALNCPQCGASQVSATPAKQLQQTGSPWMAIVSLVLGILCSLALF CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DDGEWDLDTVVGLGMCSIAGLVLGVISINKKLPGNGIAIAGTVLSAVSLLIFFGLIAN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AMVFCRGCAKEIHETALNCPQCGASQVSATPAKQLQQTGSPWMAIVSLVLGILCSLALF CEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DDGEWDLDTVVGLGMCSIAGLVLGVISINKKLPGNGIAIAGTVLSAVSLLIFFGLIAN CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA