| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66043389
Identifier: 66043389
GI number: 66043389
Start: 128434
End: 129486
Strand: Reverse
Name: 66043389
Synonym: Psyr_0118
Alternate gene names: NA
Gene position: 129486-128434 (Counterclockwise)
Preceding gene: 66043391
Following gene: 66043388
Centisome position: 2.12
GC content: 53.09
Gene sequence:
>1053_bases ATGACTCTGCTTGACGCTATCCAACGCGAAAACACTGGCTTTGAGACAACCCTAATTAAGGGCATCGAACCGATCCGGCA GTTCGTTCTGGCTATATCAATTTATCACCTGTTCGATACAAAATTATTTTCCTTGCTGATTAAACACCCGGTTGCCTCGC TGGATGTGGCCTGTCATGAGCTCGGGATGGATAAAGAGAAACTACTTGGTTTATTCAGGTACCTGAAGAACGAAGGGATT CTTCTGGAAACAATAGACGGTTTCTCATTATCAAAAGAAGGGCACGCGCTGGCACCTTTCGAAGGCTGGTATGTGATGCT GGTCGGCGGCTATGCCACCACTTTTCTACAAATGGGCGAACGCCTTCAGGAGGGCGCTGGCTGGGCCACCCGCGACGCAA CCAAGGTCGGCGTAGGTAGCTGTGGTATCAGCCACTTCGACGCGATCCCCTTGACCAGGTCTTTGATGGCCAAAGCTCCC GGTACATGCACAAAACTGCTGGACCTGGGTTGCGGAAACGGGCGATACCTCGCCGAATTCTGCAAGGCCCTTCCGCAGAT ACAGGCTTGGGGCGCCGAACCGGACCGCGGAGGCTTCGAGGAGGCTGTAGACCTGATCGAAAAAGAAGGTCTGTCGCATC GGGTTCACATCAGCCACAGCGGGGCAGTCGAATTCCTGGATTCGGATTTTAATTTCGAGCCCGATTTCATCGTGCTGGGT TTTGTGCTGCATGAGATCCTTGGCCAGGCCGGTCGACCGGCAGTGATCAACTTCCTGAAAAAGATTGTCCACCGTTTCCC CGCAATCAACCTGATCATTATCGAAGTCGACAACCAATTCGACAATGCCGGCGCAATGCGCCACGGCTTAGCACTCGCTT ATTACAACCCTTACTATCTGTTGCATTGCTTCACCAATCAATTGTTGGTGCAGGACGCTGATTGGCTGGATATTTTCGCC GAGGCTGGCTTGTCCCTGATCACCCGCGAGACGACGTCTGACCAGGTTGACTCGACCGGTCTGGAAATCGGCTATCTGCT GCGGAGGGCATGA
Upstream 100 bases:
>100_bases AGCAGAATTTTTCTGAGAAAATTATTCACACTCTTTTTTATTTTGTGCAAAGATACAAACATTAACGGATTAATCAATCA CCCAATGGACATTGCAAACA
Downstream 100 bases:
>100_bases CCTTGGCATACAACAAACGCCACCAAATCGTCCGACCCGATAGTTGCCTGAGTATGCTTCAGCAGCGCCTGAAATACGCT CGTTCGGAGCTGCGAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MTLLDAIQRENTGFETTLIKGIEPIRQFVLAISIYHLFDTKLFSLLIKHPVASLDVACHELGMDKEKLLGLFRYLKNEGI LLETIDGFSLSKEGHALAPFEGWYVMLVGGYATTFLQMGERLQEGAGWATRDATKVGVGSCGISHFDAIPLTRSLMAKAP GTCTKLLDLGCGNGRYLAEFCKALPQIQAWGAEPDRGGFEEAVDLIEKEGLSHRVHISHSGAVEFLDSDFNFEPDFIVLG FVLHEILGQAGRPAVINFLKKIVHRFPAINLIIIEVDNQFDNAGAMRHGLALAYYNPYYLLHCFTNQLLVQDADWLDIFA EAGLSLITRETTSDQVDSTGLEIGYLLRRA
Sequences:
>Translated_350_residues MTLLDAIQRENTGFETTLIKGIEPIRQFVLAISIYHLFDTKLFSLLIKHPVASLDVACHELGMDKEKLLGLFRYLKNEGI LLETIDGFSLSKEGHALAPFEGWYVMLVGGYATTFLQMGERLQEGAGWATRDATKVGVGSCGISHFDAIPLTRSLMAKAP GTCTKLLDLGCGNGRYLAEFCKALPQIQAWGAEPDRGGFEEAVDLIEKEGLSHRVHISHSGAVEFLDSDFNFEPDFIVLG FVLHEILGQAGRPAVINFLKKIVHRFPAINLIIIEVDNQFDNAGAMRHGLALAYYNPYYLLHCFTNQLLVQDADWLDIFA EAGLSLITRETTSDQVDSTGLEIGYLLRRA >Mature_349_residues TLLDAIQRENTGFETTLIKGIEPIRQFVLAISIYHLFDTKLFSLLIKHPVASLDVACHELGMDKEKLLGLFRYLKNEGIL LETIDGFSLSKEGHALAPFEGWYVMLVGGYATTFLQMGERLQEGAGWATRDATKVGVGSCGISHFDAIPLTRSLMAKAPG TCTKLLDLGCGNGRYLAEFCKALPQIQAWGAEPDRGGFEEAVDLIEKEGLSHRVHISHSGAVEFLDSDFNFEPDFIVLGF VLHEILGQAGRPAVINFLKKIVHRFPAINLIIIEVDNQFDNAGAMRHGLALAYYNPYYLLHCFTNQLLVQDADWLDIFAE AGLSLITRETTSDQVDSTGLEIGYLLRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38781; Mature: 38650
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLDAIQRENTGFETTLIKGIEPIRQFVLAISIYHLFDTKLFSLLIKHPVASLDVACHE CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LGMDKEKLLGLFRYLKNEGILLETIDGFSLSKEGHALAPFEGWYVMLVGGYATTFLQMGE HCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCEEEEEECHHHHHHHHHHH RLQEGAGWATRDATKVGVGSCGISHFDAIPLTRSLMAKAPGTCTKLLDLGCGNGRYLAEF HHHHCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHH CKALPQIQAWGAEPDRGGFEEAVDLIEKEGLSHRVHISHSGAVEFLDSDFNFEPDFIVLG HHHCHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCHHHHH FVLHEILGQAGRPAVINFLKKIVHRFPAINLIIIEVDNQFDNAGAMRHGLALAYYNPYYL HHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCEEEEEECCCCE LHCFTNQLLVQDADWLDIFAEAGLSLITRETTSDQVDSTGLEIGYLLRRA EEHHHHHHHHCCCHHHHHHHHCCHHEEEECCCCCHHHCCCCHHHHHHHCC >Mature Secondary Structure TLLDAIQRENTGFETTLIKGIEPIRQFVLAISIYHLFDTKLFSLLIKHPVASLDVACHE CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LGMDKEKLLGLFRYLKNEGILLETIDGFSLSKEGHALAPFEGWYVMLVGGYATTFLQMGE HCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCEEEEEECHHHHHHHHHHH RLQEGAGWATRDATKVGVGSCGISHFDAIPLTRSLMAKAPGTCTKLLDLGCGNGRYLAEF HHHHCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHH CKALPQIQAWGAEPDRGGFEEAVDLIEKEGLSHRVHISHSGAVEFLDSDFNFEPDFIVLG HHHCHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCHHHHH FVLHEILGQAGRPAVINFLKKIVHRFPAINLIIIEVDNQFDNAGAMRHGLALAYYNPYYL HHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCEEEEEECCCCE LHCFTNQLLVQDADWLDIFAEAGLSLITRETTSDQVDSTGLEIGYLLRRA EEHHHHHHHHCCCHHHHHHHHCCHHEEEECCCCCHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA