| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is acrR [C]
Identifier: 66043391
GI number: 66043391
Start: 131018
End: 131647
Strand: Reverse
Name: acrR [C]
Synonym: Psyr_0121
Alternate gene names: 66043391
Gene position: 131647-131018 (Counterclockwise)
Preceding gene: 66043400
Following gene: 66043389
Centisome position: 2.16
GC content: 53.65
Gene sequence:
>630_bases ATGTCAACGTCTAACCGAAATCAGGCAGACCCCACCAGAAGGCAGCGGATGATCAGAGAGGATCGCCTCCGTCAGTTGCT CGATGTCGCGTGGAGATTGGTAGGGGAAAGGGGGTCCGATGCGCTCACCTTGGGTCGACTTGCCGAGCAAGCCGGGGTTA CGAAGCCAGTTGTGTACGACCATTTTGCTACCAGAGCCGCACTGTTTGCGGCCTTGTACGAAGATTTTGATCAGCGCCAG ACAGCCCGCATGGACATTGCGATAGCCGCCAGTGAAGCCACGCTCGACGGCGTAGCGAGCGTCGTAGCATCATCCTATGT TGACTGCGTATTGCTTCAAGGCCATGAAATAGCGGGTGTTATTGCTGTGCTATCCAGCACACCAGAGCTTGAGAAAATCA AACGCGAATATGAGGCTAAGTTCCTTATCAAGTGCCGAACGTGGTTTTCGCCATTCCTGAAAGCAGGGGAACTGGGTTTG TCGAGTCTGCACGCAATTGTAGGGTGTGCTGAATCACTATCGGCCGCCGCAGCGCGTGAAGAAATTTCTTCGGATGACGC CAAAAAGGAGCTGATGGCTGTGATTGTGGCAGTTGTTCAGAAAGCAGGGCGAGGAGGACTTGAAAAGTGA
Upstream 100 bases:
>100_bases AGGACGTGCATTACGATTCCTTCCGTTGCCTTGAGGCGGGCGGTTGCCGACTATATACTTTTGGTAAGTAATGCTCGCAA TCTACTAATGGTATATAGAG
Downstream 100 bases:
>100_bases CAGGCTGCTTCTGGCCGAAAGCAGCCCGCCAGACAAACCGACCCAGGCTTACAGCAATCTCATCCTCACCAGTGAAACAA GTCACCAGACAATCGGCTTG
Product: regulatory protein, TetR
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSTSNRNQADPTRRQRMIREDRLRQLLDVAWRLVGERGSDALTLGRLAEQAGVTKPVVYDHFATRAALFAALYEDFDQRQ TARMDIAIAASEATLDGVASVVASSYVDCVLLQGHEIAGVIAVLSSTPELEKIKREYEAKFLIKCRTWFSPFLKAGELGL SSLHAIVGCAESLSAAAAREEISSDDAKKELMAVIVAVVQKAGRGGLEK
Sequences:
>Translated_209_residues MSTSNRNQADPTRRQRMIREDRLRQLLDVAWRLVGERGSDALTLGRLAEQAGVTKPVVYDHFATRAALFAALYEDFDQRQ TARMDIAIAASEATLDGVASVVASSYVDCVLLQGHEIAGVIAVLSSTPELEKIKREYEAKFLIKCRTWFSPFLKAGELGL SSLHAIVGCAESLSAAAAREEISSDDAKKELMAVIVAVVQKAGRGGLEK >Mature_208_residues STSNRNQADPTRRQRMIREDRLRQLLDVAWRLVGERGSDALTLGRLAEQAGVTKPVVYDHFATRAALFAALYEDFDQRQT ARMDIAIAASEATLDGVASVVASSYVDCVLLQGHEIAGVIAVLSSTPELEKIKREYEAKFLIKCRTWFSPFLKAGELGLS SLHAIVGCAESLSAAAAREEISSDDAKKELMAVIVAVVQKAGRGGLEK
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22752; Mature: 22621
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSNRNQADPTRRQRMIREDRLRQLLDVAWRLVGERGSDALTLGRLAEQAGVTKPVVYD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH HFATRAALFAALYEDFDQRQTARMDIAIAASEATLDGVASVVASSYVDCVLLQGHEIAGV HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IAVLSSTPELEKIKREYEAKFLIKCRTWFSPFLKAGELGLSSLHAIVGCAESLSAAAARE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISSDDAKKELMAVIVAVVQKAGRGGLEK HHCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STSNRNQADPTRRQRMIREDRLRQLLDVAWRLVGERGSDALTLGRLAEQAGVTKPVVYD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH HFATRAALFAALYEDFDQRQTARMDIAIAASEATLDGVASVVASSYVDCVLLQGHEIAGV HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IAVLSSTPELEKIKREYEAKFLIKCRTWFSPFLKAGELGLSSLHAIVGCAESLSAAAARE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISSDDAKKELMAVIVAVVQKAGRGGLEK HHCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA