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The map label for this gene is 66043366

Identifier: 66043366

GI number: 66043366

Start: 104951

End: 106369

Strand: Reverse

Name: 66043366

Synonym: Psyr_0095

Alternate gene names: NA

Gene position: 106369-104951 (Counterclockwise)

Preceding gene: 66043367

Following gene: 66043364

Centisome position: 1.75

GC content: 56.59

Gene sequence:

>1419_bases
ATGGCCTACATCCAAGGAGAGTCTCGCAGCCAGACCAGTCTATTCCCGGTCTCGCTGGAAGAGTTGATCCCTGAGGATCA
CCTCGTTCGGGTCATAGACCTATACGTCGCCAAGCTGGATTTGGTGCAACTGGGTTTTGATAAAGCGCTTCCCAAGAACA
CCGGTCGCCCGTCCTATGACCCCGCCGATCAGCTCAAGCTGTACCTCTACGGCTATTTCCAGCGGATTCGCTCATCGCGG
CGTCTTGAAGCCGAGTGTCAGCGCAATATCGAAGTGATTTGGCTGATTAACCGACTCAAACCCGATTTCAAGACCATCGC
CGACTTTCGTAAAAACAACAAACTTGCCTTTGTGGCGACGTGTCGCGCCTTCGTTCGATTCTGCCGCATGGCGGGTCTGA
TCGCAGGCGACTTGGTGGCCATCGATGGCAGTAAGTTTCAGGCTGTCGCTTCCTCGCGGCGTCACATGAACCTCAAACAA
CTCAAGCGTCAGGAAGAAAAGCTGGACAAGCGCATAGCTCAGTATCTGGCGGAGCTGGATGAGGCCGACAAGGCCGAGGC
TGGAGAGGTGATTGATCGCGGCGCGATCAAAACAGCACTGGCGCAGCTTGAAGTTCGGCAGCACGACAATCAGAGCTGCC
AAGCGTTGATGAGCTCGATGGGCCTGGAGCAGTTCAACACCCATGAAAGCGATGCCCGAATGATGCGTACGCCCAAAGGG
CCACGGGTGGCCTACAACGTACAAACCGCCGTGGACGCCGCACATTGCCTGATTCTGCACCATGAAGTGACTCAGGACGG
CGATGACCGAAAACAGCTGGAGCCAATGGCCAAAGCCGCCAAAGAACATCTGGAACAAGATGCCTTGAGCGTGACGGCCG
ATGCCGGCTATTCAAACGGCCAGCAGTTTCAGGCCTGCGAGGAGGCTGGGATAACGGTCTATGTGCCGCCCAATCGCACG
GTCAACCCAGGCGGTGAGGAACTCTTTGAGCGCAAAGACTTTACCTACGAAGCCGAACACGATCGTTATCAGTGCCCGGC
GGGCAAATGGTTGACGCTCAAGCAGCGCAACAGGGGCGATCGGATCTATCAGGCACATGTCAGCGACTGCGCCGCCTGCC
CACTCAAATCCCGATGCACTGGCGCTCAACGCCGCTATGTCTCACGCCATGCCCATGAGGCAGCCTTTGAGCGAATGGAG
CAGCGAATGCTCGCGCATCCGCAAATGATGGCCAGTCGAAGATCCATCGTTGAGCATCCTTTCGGCAATCTCAAGCAATG
GCTGTTGGGGAATGGTCGCTTCCTGCTGCGCCAGTTGGAGGGAGCAAAAGCGGAAATGGCCTTGGCGGTGAATGCTTACA
ACCTCAAGCGAGCGATTAGCGTACTCGGAGCCCGCCAATTGATGGCGCTAATGGGCTGA

Upstream 100 bases:

>100_bases
GGTAGCCGGAAAACATCCGGCTACTTCAGACCTTCCCTAGCAATCTTTGCAGCGGTCAAAGAAAATGCTCCGTATCGAAA
GGTACGGAGCATTTTTCGTT

Downstream 100 bases:

>100_bases
AAAGTTTTTTTTCGACTGTTGCCCACACAAAAACAAACGCCCCGAACAAGTCGGGGCGTTTGTTGGGCTTGCCTTCAGTG
CGTTTTCACACAGTCTGGTC

Product: transposase IS4

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase; ISPsy6 Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; ISCps6 Transposase; ISBma2 Transposase; IS5 Family Transposase N-Terminal Domain; IS5 Family Transposase N-Terminal Domain Protein; ISNCY Family Transposase; ISPpu20 Transposase; Transposase Is4 Family

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MAYIQGESRSQTSLFPVSLEELIPEDHLVRVIDLYVAKLDLVQLGFDKALPKNTGRPSYDPADQLKLYLYGYFQRIRSSR
RLEAECQRNIEVIWLINRLKPDFKTIADFRKNNKLAFVATCRAFVRFCRMAGLIAGDLVAIDGSKFQAVASSRRHMNLKQ
LKRQEEKLDKRIAQYLAELDEADKAEAGEVIDRGAIKTALAQLEVRQHDNQSCQALMSSMGLEQFNTHESDARMMRTPKG
PRVAYNVQTAVDAAHCLILHHEVTQDGDDRKQLEPMAKAAKEHLEQDALSVTADAGYSNGQQFQACEEAGITVYVPPNRT
VNPGGEELFERKDFTYEAEHDRYQCPAGKWLTLKQRNRGDRIYQAHVSDCAACPLKSRCTGAQRRYVSRHAHEAAFERME
QRMLAHPQMMASRRSIVEHPFGNLKQWLLGNGRFLLRQLEGAKAEMALAVNAYNLKRAISVLGARQLMALMG

Sequences:

>Translated_472_residues
MAYIQGESRSQTSLFPVSLEELIPEDHLVRVIDLYVAKLDLVQLGFDKALPKNTGRPSYDPADQLKLYLYGYFQRIRSSR
RLEAECQRNIEVIWLINRLKPDFKTIADFRKNNKLAFVATCRAFVRFCRMAGLIAGDLVAIDGSKFQAVASSRRHMNLKQ
LKRQEEKLDKRIAQYLAELDEADKAEAGEVIDRGAIKTALAQLEVRQHDNQSCQALMSSMGLEQFNTHESDARMMRTPKG
PRVAYNVQTAVDAAHCLILHHEVTQDGDDRKQLEPMAKAAKEHLEQDALSVTADAGYSNGQQFQACEEAGITVYVPPNRT
VNPGGEELFERKDFTYEAEHDRYQCPAGKWLTLKQRNRGDRIYQAHVSDCAACPLKSRCTGAQRRYVSRHAHEAAFERME
QRMLAHPQMMASRRSIVEHPFGNLKQWLLGNGRFLLRQLEGAKAEMALAVNAYNLKRAISVLGARQLMALMG
>Mature_471_residues
AYIQGESRSQTSLFPVSLEELIPEDHLVRVIDLYVAKLDLVQLGFDKALPKNTGRPSYDPADQLKLYLYGYFQRIRSSRR
LEAECQRNIEVIWLINRLKPDFKTIADFRKNNKLAFVATCRAFVRFCRMAGLIAGDLVAIDGSKFQAVASSRRHMNLKQL
KRQEEKLDKRIAQYLAELDEADKAEAGEVIDRGAIKTALAQLEVRQHDNQSCQALMSSMGLEQFNTHESDARMMRTPKGP
RVAYNVQTAVDAAHCLILHHEVTQDGDDRKQLEPMAKAAKEHLEQDALSVTADAGYSNGQQFQACEEAGITVYVPPNRTV
NPGGEELFERKDFTYEAEHDRYQCPAGKWLTLKQRNRGDRIYQAHVSDCAACPLKSRCTGAQRRYVSRHAHEAAFERMEQ
RMLAHPQMMASRRSIVEHPFGNLKQWLLGNGRFLLRQLEGAKAEMALAVNAYNLKRAISVLGARQLMALMG

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53526; Mature: 53395

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIQGESRSQTSLFPVSLEELIPEDHLVRVIDLYVAKLDLVQLGFDKALPKNTGRPSYD
CCEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCC
PADQLKLYLYGYFQRIRSSRRLEAECQRNIEVIWLINRLKPDFKTIADFRKNNKLAFVAT
CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEHHH
CRAFVRFCRMAGLIAGDLVAIDGSKFQAVASSRRHMNLKQLKRQEEKLDKRIAQYLAELD
HHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
EADKAEAGEVIDRGAIKTALAQLEVRQHDNQSCQALMSSMGLEQFNTHESDARMMRTPKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHHHCCCCC
PRVAYNVQTAVDAAHCLILHHEVTQDGDDRKQLEPMAKAAKEHLEQDALSVTADAGYSNG
CEEEEEHHHHHHHHHHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
QQFQACEEAGITVYVPPNRTVNPGGEELFERKDFTYEAEHDRYQCPAGKWLTLKQRNRGD
HHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCEECCCCCEECCCCCEEEEECCCCCC
RIYQAHVSDCAACPLKSRCTGAQRRYVSRHAHEAAFERMEQRMLAHPQMMASRRSIVEHP
HHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
FGNLKQWLLGNGRFLLRQLEGAKAEMALAVNAYNLKRAISVLGARQLMALMG
CHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AYIQGESRSQTSLFPVSLEELIPEDHLVRVIDLYVAKLDLVQLGFDKALPKNTGRPSYD
CEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCC
PADQLKLYLYGYFQRIRSSRRLEAECQRNIEVIWLINRLKPDFKTIADFRKNNKLAFVAT
CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCEEEHHH
CRAFVRFCRMAGLIAGDLVAIDGSKFQAVASSRRHMNLKQLKRQEEKLDKRIAQYLAELD
HHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
EADKAEAGEVIDRGAIKTALAQLEVRQHDNQSCQALMSSMGLEQFNTHESDARMMRTPKG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCCCHHHHHHCCCCC
PRVAYNVQTAVDAAHCLILHHEVTQDGDDRKQLEPMAKAAKEHLEQDALSVTADAGYSNG
CEEEEEHHHHHHHHHHHEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCC
QQFQACEEAGITVYVPPNRTVNPGGEELFERKDFTYEAEHDRYQCPAGKWLTLKQRNRGD
HHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCEECCCCCEECCCCCEEEEECCCCCC
RIYQAHVSDCAACPLKSRCTGAQRRYVSRHAHEAAFERMEQRMLAHPQMMASRRSIVEHP
HHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
FGNLKQWLLGNGRFLLRQLEGAKAEMALAVNAYNLKRAISVLGARQLMALMG
CHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA